RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
HMGB1P26-201ENST00000452520 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
HMGB1P26-201ENST00000452520 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
HMGB1P26-201ENST00000452520 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
HMGB1P26-201ENST00000452520 PLCB2Q00722 1185 aa12.48□□□□□ -0.41
HMGB1P26-201ENST00000452520 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
HMGB1P26-201ENST00000452520 PYGBP11216 843 aa12.47□□□□□ -0.41
HMGB1P26-201ENST00000452520 RIOK3O14730 519 aaKnown RBP12.46□□□□□ -0.41
HMGB1P26-201ENST00000452520 CHGAP10645 457 aaKnown RBP12.46□□□□□ -0.41
HMGB1P26-201ENST00000452520 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
HMGB1P26-201ENST00000452520 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
HMGB1P26-201ENST00000452520 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
HMGB1P26-201ENST00000452520 HS6ST3Q8IZP7 471 aa12.38□□□□□ -0.43
HMGB1P26-201ENST00000452520 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
HMGB1P26-201ENST00000452520 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
HMGB1P26-201ENST00000452520 SGIP1Q9BQI5 828 aa12.34□□□□□ -0.43
HMGB1P26-201ENST00000452520 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
HMGB1P26-201ENST00000452520 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
HMGB1P26-201ENST00000452520 STK25O00506 426 aa12.3□□□□□ -0.44
HMGB1P26-201ENST00000452520 ZNF467Q7Z7K2 595 aaPredicted RBP12.3□□□□□ -0.44
HMGB1P26-201ENST00000452520 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
HMGB1P26-201ENST00000452520 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
HMGB1P26-201ENST00000452520 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.29□□□□□ -0.44
HMGB1P26-201ENST00000452520 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
HMGB1P26-201ENST00000452520 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
HMGB1P26-201ENST00000452520 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
HMGB1P26-201ENST00000452520 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
HMGB1P26-201ENST00000452520 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
HMGB1P26-201ENST00000452520 PCDHB13Q9Y5F0 798 aa12.27□□□□□ -0.45
HMGB1P26-201ENST00000452520 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
HMGB1P26-201ENST00000452520 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
HMGB1P26-201ENST00000452520 MAP3K13O43283 966 aa12.24□□□□□ -0.45
HMGB1P26-201ENST00000452520 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
HMGB1P26-201ENST00000452520 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
HMGB1P26-201ENST00000452520 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
HMGB1P26-201ENST00000452520 NKX1-1Q15270 411 aaPredicted RBP12.23□□□□□ -0.45
HMGB1P26-201ENST00000452520 PDAP1Q13442 181 aaKnown RBP12.22□□□□□ -0.45
HMGB1P26-201ENST00000452520 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
HMGB1P26-201ENST00000452520 PSEN1P49768 467 aa12.18□□□□□ -0.46
HMGB1P26-201ENST00000452520 PHF12Q96QT6 1004 aa12.18□□□□□ -0.46
HMGB1P26-201ENST00000452520 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
HMGB1P26-201ENST00000452520 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
HMGB1P26-201ENST00000452520 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
HMGB1P26-201ENST00000452520 HAX1O00165 279 aa12.09□□□□□ -0.47
HMGB1P26-201ENST00000452520 RYDENQ9NUL5 291 aaKnown RBP12.07□□□□□ -0.48
HMGB1P26-201ENST00000452520 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
HMGB1P26-201ENST00000452520 EVX2Q03828 476 aa12.04□□□□□ -0.48
HMGB1P26-201ENST00000452520 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
HMGB1P26-201ENST00000452520 CABP2Q9NPB3 220 aa12.01□□□□□ -0.49
HMGB1P26-201ENST00000452520 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
HMGB1P26-201ENST00000452520 TRPC6Q9Y210 931 aa12□□□□□ -0.49
HMGB1P26-201ENST00000452520 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
HMGB1P26-201ENST00000452520 TMEM106CQ9BVX2 250 aa11.98□□□□□ -0.49
HMGB1P26-201ENST00000452520 SOX12O15370 315 aa11.97□□□□□ -0.49
HMGB1P26-201ENST00000452520 CLCN6P51797 869 aa11.96□□□□□ -0.49
HMGB1P26-201ENST00000452520 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
HMGB1P26-201ENST00000452520 TIE1P35590 1138 aa11.93□□□□□ -0.5
HMGB1P26-201ENST00000452520 NLRP6P59044 892 aa11.92□□□□□ -0.5
HMGB1P26-201ENST00000452520 POTEHQ6S545 545 aa11.91□□□□□ -0.5
HMGB1P26-201ENST00000452520 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
HMGB1P26-201ENST00000452520 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
HMGB1P26-201ENST00000452520 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
HMGB1P26-201ENST00000452520 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
HMGB1P26-201ENST00000452520 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
HMGB1P26-201ENST00000452520 PPP1R37O75864 691 aa11.86□□□□□ -0.51
HMGB1P26-201ENST00000452520 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
HMGB1P26-201ENST00000452520 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
HMGB1P26-201ENST00000452520 GABBR2O75899 941 aa11.81□□□□□ -0.52
HMGB1P26-201ENST00000452520 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
HMGB1P26-201ENST00000452520 CADPS2Q86UW7 1296 aa11.8□□□□□ -0.52
HMGB1P26-201ENST00000452520 BCANQ96GW7 911 aa11.8□□□□□ -0.52
HMGB1P26-201ENST00000452520 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P26-201ENST00000452520 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P26-201ENST00000452520 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
HMGB1P26-201ENST00000452520 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
HMGB1P26-201ENST00000452520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.53
HMGB1P26-201ENST00000452520 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
HMGB1P26-201ENST00000452520 IER5LQ5T953 404 aa11.68□□□□□ -0.54
HMGB1P26-201ENST00000452520 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
HMGB1P26-201ENST00000452520 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
HMGB1P26-201ENST00000452520 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
HMGB1P26-201ENST00000452520 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
HMGB1P26-201ENST00000452520 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
HMGB1P26-201ENST00000452520 PDCD7Q8N8D1 485 aaKnown RBP11.65□□□□□ -0.54
HMGB1P26-201ENST00000452520 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
HMGB1P26-201ENST00000452520 PDE4AP27815 886 aa11.62□□□□□ -0.55
HMGB1P26-201ENST00000452520 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
HMGB1P26-201ENST00000452520 NBR1Q14596 966 aa11.6□□□□□ -0.55
HMGB1P26-201ENST00000452520 LARP6Q9BRS8 491 aaKnown RBP11.6□□□□□ -0.55
HMGB1P26-201ENST00000452520 CRISPLD2Q9H0B8 497 aa11.59□□□□□ -0.55
HMGB1P26-201ENST00000452520 PLCG2P16885 1265 aa11.58□□□□□ -0.56
HMGB1P26-201ENST00000452520 P3H3Q8IVL6 736 aa11.58□□□□□ -0.56
HMGB1P26-201ENST00000452520 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
HMGB1P26-201ENST00000452520 MICALL2Q8IY33 904 aa11.57□□□□□ -0.56
HMGB1P26-201ENST00000452520 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
HMGB1P26-201ENST00000452520 COLQQ9Y215 455 aaPredicted RBP11.56□□□□□ -0.56
HMGB1P26-201ENST00000452520 SEC24BO95487 1268 aa11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 C7P10643 843 aa11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 MFSD10Q14728 455 aa11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms