RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
SNHG3-203ENST00000447507 PHF12Q96QT6 1004 aa5.15□□□□□ -1.59
SNHG3-203ENST00000447507 ATF5Q9Y2D1 282 aaPredicted RBP5.15□□□□□ -1.59
SNHG3-203ENST00000447507 ZNF692Q9BU19 519 aaPredicted RBP5.13□□□□□ -1.59
SNHG3-203ENST00000447507 PAK3O75914 559 aaPredicted RBP5.12□□□□□ -1.59
SNHG3-203ENST00000447507 RNF166Q96A37 237 aaPredicted RBP5.12□□□□□ -1.59
SNHG3-203ENST00000447507 ZBTB22O15209 634 aa5.11□□□□□ -1.59
SNHG3-203ENST00000447507 SLAIN1Q8ND83 568 aa5.11□□□□□ -1.59
SNHG3-203ENST00000447507 ATN1P54259 1190 aaPredicted RBP5.09□□□□□ -1.59
SNHG3-203ENST00000447507 MS4A3Q96HJ5 214 aa5.09□□□□□ -1.59
SNHG3-203ENST00000447507 FBLN2P98095 1184 aa5.08□□□□□ -1.6
SNHG3-203ENST00000447507 MARVELD3Q96A59 401 aa5.08□□□□□ -1.6
SNHG3-203ENST00000447507 SNPHO15079 494 aa5.07□□□□□ -1.6
SNHG3-203ENST00000447507 ATXN8OSP0DMR3 200 aa5.07□□□□□ -1.6
SNHG3-203ENST00000447507 HS3ST6Q96QI5 342 aa5.02□□□□□ -1.61
SNHG3-203ENST00000447507 EMP3P54852 163 aa5.01□□□□□ -1.61
SNHG3-203ENST00000447507 PABPN1Q86U42 306 aaKnown RBP eCLIP5.01□□□□□ -1.61
SNHG3-203ENST00000447507 POTEB3A0JP26 581 aa5□□□□□ -1.61
SNHG3-203ENST00000447507 POTEBQ6S5H4 581 aa5□□□□□ -1.61
SNHG3-203ENST00000447507 COLQQ9Y215 455 aaPredicted RBP5□□□□□ -1.61
SNHG3-203ENST00000447507 SEC24BO95487 1268 aa4.99□□□□□ -1.61
SNHG3-203ENST00000447507 MYT1LQ9UL68 1186 aa4.98□□□□□ -1.61
SNHG3-203ENST00000447507 CREBZFQ9NS37 354 aa4.96□□□□□ -1.62
SNHG3-203ENST00000447507 BMP2KQ9NSY1 1161 aaPredicted RBP4.96□□□□□ -1.62
SNHG3-203ENST00000447507 IER5LQ5T953 404 aa4.95□□□□□ -1.62
SNHG3-203ENST00000447507 FAM205CA6NFA0 338 aa4.94□□□□□ -1.62
SNHG3-203ENST00000447507 TIE1P35590 1138 aa4.93□□□□□ -1.62
SNHG3-203ENST00000447507 MKRN4PQ13434 485 aaPredicted RBP4.92□□□□□ -1.62
SNHG3-203ENST00000447507 PTGER2P43116 358 aa4.91□□□□□ -1.62
SNHG3-203ENST00000447507 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
SNHG3-203ENST00000447507 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
SNHG3-203ENST00000447507 PLA2G2EQ9NZK7 142 aa4.88□□□□□ -1.63
SNHG3-203ENST00000447507 NPM1P06748 294 aaKnown RBP eCLIP4.87□□□□□ -1.63
SNHG3-203ENST00000447507 CSRNP3Q8WYN3 585 aa4.84□□□□□ -1.63
SNHG3-203ENST00000447507 IRX2Q9BZI1 471 aaPredicted RBP4.84□□□□□ -1.63
SNHG3-203ENST00000447507 RGS20O76081 388 aa4.83□□□□□ -1.64
SNHG3-203ENST00000447507 TTLL13PA6NNM8 815 aa4.82□□□□□ -1.64
SNHG3-203ENST00000447507 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.82□□□□□ -1.64
SNHG3-203ENST00000447507 TRPC6Q9Y210 931 aa4.81□□□□□ -1.64
SNHG3-203ENST00000447507 KIF12Q96FN5 646 aa4.79□□□□□ -1.64
SNHG3-203ENST00000447507 EHMT2Q96KQ7 1210 aa4.78□□□□□ -1.64
SNHG3-203ENST00000447507 TRIM35Q9UPQ4 493 aa4.78□□□□□ -1.64
SNHG3-203ENST00000447507 PLCG2P16885 1265 aa4.77□□□□□ -1.65
SNHG3-203ENST00000447507 MNX1P50219 401 aaPredicted RBP4.77□□□□□ -1.65
SNHG3-203ENST00000447507 CCDC61Q9Y6R9 512 aa4.77□□□□□ -1.65
SNHG3-203ENST00000447507 STAG3Q9UJ98 1225 aa4.75□□□□□ -1.65
SNHG3-203ENST00000447507 IRX5P78411 483 aaPredicted RBP4.72□□□□□ -1.65
SNHG3-203ENST00000447507 HCSTQ9UBK5 93 aa4.7□□□□□ -1.66
SNHG3-203ENST00000447507 SPDYE4A6NLX3 237 aa4.69□□□□□ -1.66
SNHG3-203ENST00000447507 ERBB3P21860 1342 aa4.69□□□□□ -1.66
SNHG3-203ENST00000447507 MAP3K13O43283 966 aa4.68□□□□□ -1.66
SNHG3-203ENST00000447507 HOXB1P14653 301 aaPredicted RBP4.68□□□□□ -1.66
SNHG3-203ENST00000447507 ZNF687Q8N1G0 1237 aa4.66□□□□□ -1.66
SNHG3-203ENST00000447507 TSPYL2Q9H2G4 693 aaPredicted RBP4.66□□□□□ -1.66
SNHG3-203ENST00000447507 OCEL1Q9H607 264 aa4.66□□□□□ -1.66
SNHG3-203ENST00000447507 Q6ZNB5 142 aa4.65□□□□□ -1.67
SNHG3-203ENST00000447507 SGIP1Q9BQI5 828 aa4.63□□□□□ -1.67
SNHG3-203ENST00000447507 C3orf67Q6ZVT6 689 aa4.62□□□□□ -1.67
SNHG3-203ENST00000447507 VARS2Q5ST30 1063 aaKnown RBP4.61□□□□□ -1.67
SNHG3-203ENST00000447507 IFFO2Q5TF58 517 aa4.6□□□□□ -1.67
SNHG3-203ENST00000447507 HOXB3P14651 431 aaPredicted RBP4.59□□□□□ -1.67
SNHG3-203ENST00000447507 ANKRD13DQ6ZTN6 518 aa4.56□□□□□ -1.68
SNHG3-203ENST00000447507 PROM2Q8N271 834 aa4.56□□□□□ -1.68
SNHG3-203ENST00000447507 ZNF710Q8N1W2 664 aa4.55□□□□□ -1.68
SNHG3-203ENST00000447507 TMEM106CQ9BVX2 250 aa4.54□□□□□ -1.68
SNHG3-203ENST00000447507 LSM11P83369 360 aaKnown RBP eCLIP4.53□□□□□ -1.68
SNHG3-203ENST00000447507 L3MBTL3Q96JM7 780 aaPredicted RBP4.53□□□□□ -1.68
SNHG3-203ENST00000447507 A0A0G2JS52 829 aa4.52□□□□□ -1.69
SNHG3-203ENST00000447507 LCE2BO14633 110 aa4.52□□□□□ -1.69
SNHG3-203ENST00000447507 DOK7Q18PE1 504 aa4.52□□□□□ -1.69
SNHG3-203ENST00000447507 LAPTM4AQ15012 233 aa4.51□□□□□ -1.69
SNHG3-203ENST00000447507 TRAF7Q6Q0C0 670 aa4.51□□□□□ -1.69
SNHG3-203ENST00000447507 PCDHB13Q9Y5F0 798 aa4.51□□□□□ -1.69
SNHG3-203ENST00000447507 PLEKHG5O94827 1062 aa4.5□□□□□ -1.69
SNHG3-203ENST00000447507 ZNF775Q96BV0 537 aaPredicted RBP4.49□□□□□ -1.69
SNHG3-203ENST00000447507 RIMBP2O15034 1052 aa4.48□□□□□ -1.69
SNHG3-203ENST00000447507 PDCD7Q8N8D1 485 aaKnown RBP4.47□□□□□ -1.69
SNHG3-203ENST00000447507 MIER1Q8N108 512 aa4.46□□□□□ -1.7
SNHG3-203ENST00000447507 ZSWIM6Q9HCJ5 1215 aa4.46□□□□□ -1.7
SNHG3-203ENST00000447507 IFNL1Q8IU54 200 aa4.44□□□□□ -1.7
SNHG3-203ENST00000447507 RASEFQ8IZ41 740 aa4.44□□□□□ -1.7
SNHG3-203ENST00000447507 PLCD3Q8N3E9 789 aa4.44□□□□□ -1.7
SNHG3-203ENST00000447507 ZNF787Q6DD87 383 aa4.43□□□□□ -1.7
SNHG3-203ENST00000447507 ZBTB47Q9UFB7 747 aaPredicted RBP4.43□□□□□ -1.7
SNHG3-203ENST00000447507 PBX2P40425 430 aa4.42□□□□□ -1.7
SNHG3-203ENST00000447507 FKBP8Q14318 412 aa4.41□□□□□ -1.7
SNHG3-203ENST00000447507 SUZ12Q15022 739 aaKnown RBP4.39□□□□□ -1.71
SNHG3-203ENST00000447507 FAM212AQ96EL1 285 aa4.39□□□□□ -1.71
SNHG3-203ENST00000447507 STK17AQ9UEE5 414 aa4.39□□□□□ -1.71
SNHG3-203ENST00000447507 NUBP1P53384 320 aa4.38□□□□□ -1.71
SNHG3-203ENST00000447507 GPR153Q6NV75 609 aa4.37□□□□□ -1.71
SNHG3-203ENST00000447507 FBXO3Q9UK99 471 aa4.35□□□□□ -1.71
SNHG3-203ENST00000447507 ZNF316A6NFI3 1004 aaPredicted RBP4.33□□□□□ -1.72
SNHG3-203ENST00000447507 LCE2AQ5TA79 106 aaPredicted RBP4.33□□□□□ -1.72
SNHG3-203ENST00000447507 ADGRD1Q6QNK2 874 aa4.32□□□□□ -1.72
SNHG3-203ENST00000447507 DCAF8Q5TAQ9 597 aa4.31□□□□□ -1.72
SNHG3-203ENST00000447507 GFRA3O60609 400 aa4.3□□□□□ -1.72
SNHG3-203ENST00000447507 PYGBP11216 843 aa4.3□□□□□ -1.72
SNHG3-203ENST00000447507 POTEEQ6S8J3 1075 aa4.3□□□□□ -1.72
SNHG3-203ENST00000447507 ILDR1Q86SU0 546 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms