RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 SMARCA2P51531 1590 aa15.59■□□□□ 0.09
FN1-212ENST00000446046 HDGFP51858 240 aaKnown RBP15.58■□□□□ 0.09
FN1-212ENST00000446046 KCNH8Q96L42 1107 aa15.58■□□□□ 0.09
FN1-212ENST00000446046 CLIP1P30622 1438 aa15.58■□□□□ 0.08
FN1-212ENST00000446046 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
FN1-212ENST00000446046 CHIC2Q9UKJ5 165 aa15.56■□□□□ 0.08
FN1-212ENST00000446046 KDM2AQ9Y2K7 1162 aa15.54■□□□□ 0.08
FN1-212ENST00000446046 KANK1Q14678 1352 aa15.53■□□□□ 0.08
FN1-212ENST00000446046 CFAP53Q96M91 514 aa15.53■□□□□ 0.08
FN1-212ENST00000446046 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
FN1-212ENST00000446046 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
FN1-212ENST00000446046 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
FN1-212ENST00000446046 CFDP1Q9UEE9 299 aaPredicted RBP15.48■□□□□ 0.07
FN1-212ENST00000446046 ZBTB7CA1YPR0 619 aa15.48■□□□□ 0.07
FN1-212ENST00000446046 PNNQ9H307 717 aaKnown RBP15.47■□□□□ 0.07
FN1-212ENST00000446046 HNRNPUQ00839 825 aaKnown RBP eCLIP15.46■□□□□ 0.07
FN1-212ENST00000446046 EIF4G2P78344 907 aaKnown RBP eCLIP15.46■□□□□ 0.07
FN1-212ENST00000446046 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
FN1-212ENST00000446046 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
FN1-212ENST00000446046 KAT6BQ8WYB5 2073 aa15.44■□□□□ 0.06
FN1-212ENST00000446046 NPHP1O15259 732 aa15.44■□□□□ 0.06
FN1-212ENST00000446046 FAM9BQ8IZU0 186 aa15.44■□□□□ 0.06
FN1-212ENST00000446046 PDS5BQ9NTI5 1447 aa15.42■□□□□ 0.06
FN1-212ENST00000446046 CASC1Q6TDU7 716 aa15.42■□□□□ 0.06
FN1-212ENST00000446046 CARMIL2Q6F5E8 1435 aa15.4■□□□□ 0.06
FN1-212ENST00000446046 KNSTRNQ9Y448 316 aa15.4■□□□□ 0.06
FN1-212ENST00000446046 CHMP4BQ9H444 224 aaKnown RBP15.4■□□□□ 0.06
FN1-212ENST00000446046 POGKQ9P215 609 aa15.39■□□□□ 0.05
FN1-212ENST00000446046 GTF3C3Q9Y5Q9 886 aa15.38■□□□□ 0.05
FN1-212ENST00000446046 CCDC136Q96JN2 1154 aa15.37■□□□□ 0.05
FN1-212ENST00000446046 DDX10Q13206 875 aaKnown RBP15.36■□□□□ 0.05
FN1-212ENST00000446046 NUDCQ9Y266 331 aa15.36■□□□□ 0.05
FN1-212ENST00000446046 RRP7BPQ9NSQ0 103 aa15.35■□□□□ 0.05
FN1-212ENST00000446046 MRS2Q9HD23 443 aa15.35■□□□□ 0.05
FN1-212ENST00000446046 ARXQ96QS3 562 aa15.34■□□□□ 0.05
FN1-212ENST00000446046 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
FN1-212ENST00000446046 NCLP19338 710 aaKnown RBP15.33■□□□□ 0.04
FN1-212ENST00000446046 CCNB3Q8WWL7 1395 aa15.33■□□□□ 0.04
FN1-212ENST00000446046 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
FN1-212ENST00000446046 BECN1Q14457 450 aa15.31■□□□□ 0.04
FN1-212ENST00000446046 MAPK8IP3Q9UPT6 1336 aa15.31■□□□□ 0.04
FN1-212ENST00000446046 LMOD2Q6P5Q4 547 aa15.3■□□□□ 0.04
FN1-212ENST00000446046 ANP32EQ9BTT0 268 aa15.3■□□□□ 0.04
FN1-212ENST00000446046 ZRSR1Q15695 479 aaKnown RBP15.3■□□□□ 0.04
FN1-212ENST00000446046 CEP162Q5TB80 1403 aa15.3■□□□□ 0.04
FN1-212ENST00000446046 GOLGA2Q08379 1002 aa15.29■□□□□ 0.04
FN1-212ENST00000446046 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
FN1-212ENST00000446046 MS4A1P11836 297 aa15.28■□□□□ 0.04
FN1-212ENST00000446046 RGL3Q3MIN7 710 aa15.28■□□□□ 0.04
FN1-212ENST00000446046 PPM1GO15355 546 aaPredicted RBP15.27■□□□□ 0.03
FN1-212ENST00000446046 GOLGA6L22H0YM25 854 aa15.26■□□□□ 0.03
FN1-212ENST00000446046 PRDM2Q13029 1718 aa15.25■□□□□ 0.03
FN1-212ENST00000446046 FKBP8Q14318 412 aa15.25■□□□□ 0.03
FN1-212ENST00000446046 CUX2O14529 1486 aa15.24■□□□□ 0.03
FN1-212ENST00000446046 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
FN1-212ENST00000446046 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
FN1-212ENST00000446046 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
FN1-212ENST00000446046 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
FN1-212ENST00000446046 ARHGAP35Q9NRY4 1499 aa15.2■□□□□ 0.02
FN1-212ENST00000446046 TMX4Q9H1E5 349 aaPredicted RBP15.2■□□□□ 0.02
FN1-212ENST00000446046 TNIKQ9UKE5 1360 aa15.19■□□□□ 0.02
FN1-212ENST00000446046 CARMIL1Q5VZK9 1371 aa15.19■□□□□ 0.02
FN1-212ENST00000446046 CFAP44Q96MT7 982 aa15.18■□□□□ 0.02
FN1-212ENST00000446046 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
FN1-212ENST00000446046 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
FN1-212ENST00000446046 TMF1P82094 1093 aa15.16■□□□□ 0.02
FN1-212ENST00000446046 WIZO95785 1651 aa15.15■□□□□ 0.02
FN1-212ENST00000446046 OS9Q13438 667 aaPredicted RBP15.14■□□□□ 0.01
FN1-212ENST00000446046 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
FN1-212ENST00000446046 LAS1LQ9Y4W2 734 aaKnown RBP15.12■□□□□ 0.01
FN1-212ENST00000446046 SOGA1O94964 1423 aa15.12■□□□□ 0.01
FN1-212ENST00000446046 EID1Q9Y6B2 187 aa15.12■□□□□ 0.01
FN1-212ENST00000446046 SRPK2P78362 688 aaKnown RBP15.11■□□□□ 0.01
FN1-212ENST00000446046 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
FN1-212ENST00000446046 CALD1Q05682 793 aaKnown RBP15.11■□□□□ 0.01
FN1-212ENST00000446046 RTF1Q92541 710 aaKnown RBP15.11■□□□□ 0.01
FN1-212ENST00000446046 TOP2AP11388 1531 aaKnown RBP15.11■□□□□ 0.01
FN1-212ENST00000446046 MLECQ14165 292 aa15.11■□□□□ 0.01
FN1-212ENST00000446046 GLIPR1L2Q4G1C9 344 aa15.11■□□□□ 0.01
FN1-212ENST00000446046 FGD1P98174 961 aa15.1■□□□□ 0.01
FN1-212ENST00000446046 CCDC18Q5T9S5 1454 aa15.1■□□□□ 0.01
FN1-212ENST00000446046 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
FN1-212ENST00000446046 HDGFL2Q7Z4V5 671 aaPredicted RBP15.09■□□□□ 0.01
FN1-212ENST00000446046 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
FN1-212ENST00000446046 RSPH4AQ5TD94 716 aa15.08■□□□□ 0
FN1-212ENST00000446046 EFCAB2Q5VUJ9 269 aa15.07■□□□□ 0
FN1-212ENST00000446046 GOLGA6L6A8MZA4 724 aa15.07■□□□□ 0
FN1-212ENST00000446046 KCNJ4P48050 445 aa15.07■□□□□ 0
FN1-212ENST00000446046 TRIM44Q96DX7 344 aaPredicted RBP15.05■□□□□ 0
FN1-212ENST00000446046 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
FN1-212ENST00000446046 HDAC5Q9UQL6 1122 aa15.04■□□□□ -0
FN1-212ENST00000446046 NRDCO43847 1150 aa15.03■□□□□ -0
FN1-212ENST00000446046 MCCP23508 829 aa15.02■□□□□ -0
FN1-212ENST00000446046 DCAF11Q8TEB1 546 aa15.02□□□□□ -0.01
FN1-212ENST00000446046 GGT6Q6P531 493 aa15.01□□□□□ -0.01
FN1-212ENST00000446046 ANKRD30AQ9BXX3 1397 aa15.01□□□□□ -0.01
FN1-212ENST00000446046 TIMELESSQ9UNS1 1208 aa15□□□□□ -0.01
FN1-212ENST00000446046 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
FN1-212ENST00000446046 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
FN1-212ENST00000446046 PAK3O75914 559 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms