RNA–Protein interactions for RNA: ENST00000445192.6

PRG4-204, Transcript of proteoglycan 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PRG4, Length 5,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4-204ENST00000445192 GOLGA6L6A8MZA4 724 aa7.67□□□□□ -1.18
PRG4-204ENST00000445192 GOLGA6L22H0YM25 854 aa7.67□□□□□ -1.18
PRG4-204ENST00000445192 FBXO3Q9UK99 471 aa7.66□□□□□ -1.18
PRG4-204ENST00000445192 GOLGA6L3A6NEY3 463 aa7.66□□□□□ -1.18
PRG4-204ENST00000445192 MAP7D2Q96T17 732 aa7.66□□□□□ -1.18
PRG4-204ENST00000445192 TAF3Q5VWG9 929 aa7.65□□□□□ -1.18
PRG4-204ENST00000445192 ZNF526Q8TF50 670 aaPredicted RBP7.65□□□□□ -1.18
PRG4-204ENST00000445192 SALL2Q9Y467 1007 aaPredicted RBP7.65□□□□□ -1.19
PRG4-204ENST00000445192 UPF2Q9HAU5 1272 aaKnown RBP7.64□□□□□ -1.19
PRG4-204ENST00000445192 ANP32CO43423 234 aa7.64□□□□□ -1.19
PRG4-204ENST00000445192 MSNP26038 577 aaKnown RBP7.63□□□□□ -1.19
PRG4-204ENST00000445192 MTERF4Q7Z6M4 381 aaKnown RBP7.63□□□□□ -1.19
PRG4-204ENST00000445192 RRP9O43818 475 aaKnown RBP7.63□□□□□ -1.19
PRG4-204ENST00000445192 USP35Q9P2H5 1018 aa7.63□□□□□ -1.19
PRG4-204ENST00000445192 RBM19Q9Y4C8 960 aaKnown RBP7.63□□□□□ -1.19
PRG4-204ENST00000445192 CHAF1AQ13111 956 aaPredicted RBP7.62□□□□□ -1.19
PRG4-204ENST00000445192 KLHL34Q8N239 644 aa7.62□□□□□ -1.19
PRG4-204ENST00000445192 BECN1Q14457 450 aa7.62□□□□□ -1.19
PRG4-204ENST00000445192 SETQ01105 290 aaPredicted RBP7.61□□□□□ -1.19
PRG4-204ENST00000445192 TIMELESSQ9UNS1 1208 aa7.61□□□□□ -1.19
PRG4-204ENST00000445192 GOLGA6L1Q8N7Z2 621 aa7.61□□□□□ -1.19
PRG4-204ENST00000445192 SUPT16HQ9Y5B9 1047 aaKnown RBP7.6□□□□□ -1.19
PRG4-204ENST00000445192 TSHZ2Q9NRE2 1034 aa7.6□□□□□ -1.19
PRG4-204ENST00000445192 PLPPR3Q6T4P5 718 aa7.6□□□□□ -1.19
PRG4-204ENST00000445192 PAXIP1Q6ZW49 1069 aaPredicted RBP7.59□□□□□ -1.19
PRG4-204ENST00000445192 NEFHP12036 1026 aa7.58□□□□□ -1.2
PRG4-204ENST00000445192 PSMD1Q99460 953 aa7.58□□□□□ -1.2
PRG4-204ENST00000445192 ZMYND15Q9H091 742 aa7.58□□□□□ -1.2
PRG4-204ENST00000445192 BCCIPQ9P287 314 aaKnown RBP eCLIP7.57□□□□□ -1.2
PRG4-204ENST00000445192 STK11IPQ8N1F8 1099 aa7.57□□□□□ -1.2
PRG4-204ENST00000445192 AXDND1Q5T1B0 1012 aaPredicted RBP7.56□□□□□ -1.2
PRG4-204ENST00000445192 BCL11BQ9C0K0 894 aaPredicted RBP7.56□□□□□ -1.2
PRG4-204ENST00000445192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.56□□□□□ -1.2
PRG4-204ENST00000445192 CCDC66A2RUB6 948 aa7.56□□□□□ -1.2
PRG4-204ENST00000445192 BBXQ8WY36 941 aaPredicted RBP7.56□□□□□ -1.2
PRG4-204ENST00000445192 PLCD4Q9BRC7 762 aa7.56□□□□□ -1.2
PRG4-204ENST00000445192 CC2D1BQ5T0F9 858 aaKnown RBP7.55□□□□□ -1.2
PRG4-204ENST00000445192 TPM2P07951 284 aa7.55□□□□□ -1.2
PRG4-204ENST00000445192 RBM10P98175 930 aaKnown RBP7.55□□□□□ -1.2
PRG4-204ENST00000445192 ZNF771Q7L3S4 317 aaPredicted RBP7.55□□□□□ -1.2
PRG4-204ENST00000445192 CLSTN1O94985 981 aa7.54□□□□□ -1.2
PRG4-204ENST00000445192 TSPYL1Q9H0U9 437 aa7.54□□□□□ -1.2
PRG4-204ENST00000445192 IRX3P78415 501 aaPredicted RBP7.54□□□□□ -1.2
PRG4-204ENST00000445192 CLGNO14967 610 aa7.53□□□□□ -1.2
PRG4-204ENST00000445192 NOM1Q5C9Z4 860 aaKnown RBP7.53□□□□□ -1.2
PRG4-204ENST00000445192 SSR1P43307 286 aaKnown RBP7.53□□□□□ -1.2
PRG4-204ENST00000445192 WWC1Q8IX03 1113 aa7.51□□□□□ -1.21
PRG4-204ENST00000445192 TAOK2Q9UL54 1235 aa7.51□□□□□ -1.21
PRG4-204ENST00000445192 NAP1L2Q9ULW6 460 aaPredicted RBP7.51□□□□□ -1.21
PRG4-204ENST00000445192 FANCIQ9NVI1 1328 aa7.51□□□□□ -1.21
PRG4-204ENST00000445192 FGD1P98174 961 aa7.51□□□□□ -1.21
PRG4-204ENST00000445192 FAM43AQ8N2R8 423 aa7.5□□□□□ -1.21
PRG4-204ENST00000445192 ARID3AQ99856 593 aa7.5□□□□□ -1.21
PRG4-204ENST00000445192 ITGAEP38570 1179 aa7.49□□□□□ -1.21
PRG4-204ENST00000445192 CHMP4AQ9BY43 222 aa7.49□□□□□ -1.21
PRG4-204ENST00000445192 OS9Q13438 667 aaPredicted RBP7.49□□□□□ -1.21
PRG4-204ENST00000445192 ZBTB7CA1YPR0 619 aa7.49□□□□□ -1.21
PRG4-204ENST00000445192 SHROOM4Q9ULL8 1493 aa7.47□□□□□ -1.21
PRG4-204ENST00000445192 PPP4R2Q9NY27 417 aa7.47□□□□□ -1.21
PRG4-204ENST00000445192 GSE1Q14687 1217 aa7.46□□□□□ -1.21
PRG4-204ENST00000445192 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.45□□□□□ -1.22
PRG4-204ENST00000445192 PAIP2Q9BPZ3 127 aaKnown RBP7.45□□□□□ -1.22
PRG4-204ENST00000445192 FAM193AP78312 1265 aa7.45□□□□□ -1.22
PRG4-204ENST00000445192 HMGB1P1B2RPK0 211 aaPredicted RBP7.44□□□□□ -1.22
PRG4-204ENST00000445192 KIAA2012Q0VF49 1180 aa7.44□□□□□ -1.22
PRG4-204ENST00000445192 DHX37Q8IY37 1157 aaKnown RBP7.44□□□□□ -1.22
PRG4-204ENST00000445192 RBM28Q9NW13 759 aaKnown RBP7.44□□□□□ -1.22
PRG4-204ENST00000445192 IPO9Q96P70 1041 aaKnown RBP7.44□□□□□ -1.22
PRG4-204ENST00000445192 DCAF1Q9Y4B6 1507 aa7.43□□□□□ -1.22
PRG4-204ENST00000445192 CWC15Q9P013 229 aaKnown RBP7.43□□□□□ -1.22
PRG4-204ENST00000445192 CSPP1Q1MSJ5 1256 aa7.43□□□□□ -1.22
PRG4-204ENST00000445192 FTSJ3Q8IY81 847 aaKnown RBP7.43□□□□□ -1.22
PRG4-204ENST00000445192 TEX35Q5T0J7 233 aa7.42□□□□□ -1.22
PRG4-204ENST00000445192 NRDCO43847 1150 aa7.41□□□□□ -1.22
PRG4-204ENST00000445192 IPO4Q8TEX9 1081 aaKnown RBP7.41□□□□□ -1.22
PRG4-204ENST00000445192 TRIM41Q8WV44 630 aa7.41□□□□□ -1.22
PRG4-204ENST00000445192 TCERG1O14776 1098 aaKnown RBP7.41□□□□□ -1.22
PRG4-204ENST00000445192 MEX3CQ5U5Q3 659 aaKnown RBP7.41□□□□□ -1.22
PRG4-204ENST00000445192 MIER1Q8N108 512 aa7.41□□□□□ -1.22
PRG4-204ENST00000445192 ZNF622Q969S3 477 aaKnown RBP eCLIP7.41□□□□□ -1.22
PRG4-204ENST00000445192 GPS2Q13227 327 aa7.4□□□□□ -1.23
PRG4-204ENST00000445192 DNAJC2Q99543 621 aaKnown RBP7.4□□□□□ -1.23
PRG4-204ENST00000445192 FAM13BQ9NYF5 915 aa7.4□□□□□ -1.23
PRG4-204ENST00000445192 PDCL3Q9H2J4 239 aa7.39□□□□□ -1.23
PRG4-204ENST00000445192 HNRNPUQ00839 825 aaKnown RBP eCLIP7.38□□□□□ -1.23
PRG4-204ENST00000445192 MYH16Q9H6N6 1097 aa7.38□□□□□ -1.23
PRG4-204ENST00000445192 TMX4Q9H1E5 349 aaPredicted RBP7.38□□□□□ -1.23
PRG4-204ENST00000445192 AEBP1Q8IUX7 1158 aa7.38□□□□□ -1.23
PRG4-204ENST00000445192 DEF6Q9H4E7 631 aa7.38□□□□□ -1.23
PRG4-204ENST00000445192 HTATSF1O43719 755 aaKnown RBP7.37□□□□□ -1.23
PRG4-204ENST00000445192 IL27Q8NEV9 243 aa7.36□□□□□ -1.23
PRG4-204ENST00000445192 USP8P40818 1118 aa7.36□□□□□ -1.23
PRG4-204ENST00000445192 RDXP35241 583 aaKnown RBP7.36□□□□□ -1.23
PRG4-204ENST00000445192 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.36□□□□□ -1.23
PRG4-204ENST00000445192 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.35□□□□□ -1.23
PRG4-204ENST00000445192 CALD1Q05682 793 aaKnown RBP7.35□□□□□ -1.23
PRG4-204ENST00000445192 AAMPQ13685 434 aa7.34□□□□□ -1.23
PRG4-204ENST00000445192 SETSIPP0DME0 302 aa7.34□□□□□ -1.23
PRG4-204ENST00000445192 CHMP4BQ9H444 224 aaKnown RBP7.34□□□□□ -1.24
PRG4-204ENST00000445192 LMOD3Q0VAK6 560 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms