RNA–Protein interactions for RNA: ENST00000440192.1

SDCBPP1-201, Transcript of syndecan binding protein pseudogene 1, humanhuman

BASIC

Gene SDCBPP1, Length 890 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP1-201ENST00000440192 KLHL34Q8N239 644 aa10.69□□□□□ -0.7
SDCBPP1-201ENST00000440192 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
SDCBPP1-201ENST00000440192 FAM212AQ96EL1 285 aa10.66□□□□□ -0.7
SDCBPP1-201ENST00000440192 NUBP1P53384 320 aa10.64□□□□□ -0.71
SDCBPP1-201ENST00000440192 POTEIP0CG38 1075 aa10.63□□□□□ -0.71
SDCBPP1-201ENST00000440192 MS4A3Q96HJ5 214 aa10.63□□□□□ -0.71
SDCBPP1-201ENST00000440192 DCAF8Q5TAQ9 597 aa10.6□□□□□ -0.71
SDCBPP1-201ENST00000440192 KIF12Q96FN5 646 aa10.6□□□□□ -0.71
SDCBPP1-201ENST00000440192 MAP3K13O43283 966 aa10.56□□□□□ -0.72
SDCBPP1-201ENST00000440192 LHX8Q68G74 356 aa10.54□□□□□ -0.72
SDCBPP1-201ENST00000440192 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
SDCBPP1-201ENST00000440192 GSE1Q14687 1217 aa10.5□□□□□ -0.73
SDCBPP1-201ENST00000440192 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
SDCBPP1-201ENST00000440192 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
SDCBPP1-201ENST00000440192 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
SDCBPP1-201ENST00000440192 ATMINO43313 823 aaPredicted RBP10.48□□□□□ -0.73
SDCBPP1-201ENST00000440192 ASTLQ6HA08 431 aaPredicted RBP10.48□□□□□ -0.73
SDCBPP1-201ENST00000440192 PYGBP11216 843 aa10.47□□□□□ -0.73
SDCBPP1-201ENST00000440192 TIE1P35590 1138 aa10.45□□□□□ -0.74
SDCBPP1-201ENST00000440192 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
SDCBPP1-201ENST00000440192 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
SDCBPP1-201ENST00000440192 TRPC6Q9Y210 931 aa10.44□□□□□ -0.74
SDCBPP1-201ENST00000440192 ATN1P54259 1190 aaPredicted RBP10.43□□□□□ -0.74
SDCBPP1-201ENST00000440192 IFNL1Q8IU54 200 aa10.43□□□□□ -0.74
SDCBPP1-201ENST00000440192 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
SDCBPP1-201ENST00000440192 CIZ1Q9ULV3 898 aaPredicted RBP10.43□□□□□ -0.74
SDCBPP1-201ENST00000440192 C7P10643 843 aa10.42□□□□□ -0.74
SDCBPP1-201ENST00000440192 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
SDCBPP1-201ENST00000440192 TTLL13PA6NNM8 815 aa10.39□□□□□ -0.75
SDCBPP1-201ENST00000440192 TMEM106CQ9BVX2 250 aa10.36□□□□□ -0.75
SDCBPP1-201ENST00000440192 ZNF467Q7Z7K2 595 aaPredicted RBP10.35□□□□□ -0.75
SDCBPP1-201ENST00000440192 PCDHB8Q9UN66 801 aa10.35□□□□□ -0.75
SDCBPP1-201ENST00000440192 TRIM35Q9UPQ4 493 aa10.35□□□□□ -0.75
SDCBPP1-201ENST00000440192 SEC24BO95487 1268 aa10.33□□□□□ -0.76
SDCBPP1-201ENST00000440192 CHRM1P11229 460 aaPredicted RBP10.32□□□□□ -0.76
SDCBPP1-201ENST00000440192 POTEB2H3BUK9 544 aa10.28□□□□□ -0.76
SDCBPP1-201ENST00000440192 IER5LQ5T953 404 aa10.28□□□□□ -0.76
SDCBPP1-201ENST00000440192 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
SDCBPP1-201ENST00000440192 GOLGA2Q08379 1002 aa10.26□□□□□ -0.77
SDCBPP1-201ENST00000440192 MAMSTRQ6ZN01 415 aa10.25□□□□□ -0.77
SDCBPP1-201ENST00000440192 PLCG2P16885 1265 aa10.23□□□□□ -0.77
SDCBPP1-201ENST00000440192 PSEN1P49768 467 aa10.23□□□□□ -0.77
SDCBPP1-201ENST00000440192 OTUD5Q96G74 571 aa10.23□□□□□ -0.77
SDCBPP1-201ENST00000440192 PDAP1Q13442 181 aaKnown RBP10.22□□□□□ -0.77
SDCBPP1-201ENST00000440192 SCUBE2Q9NQ36 999 aa10.22□□□□□ -0.77
SDCBPP1-201ENST00000440192 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
SDCBPP1-201ENST00000440192 POTEFA5A3E0 1075 aa10.2□□□□□ -0.78
SDCBPP1-201ENST00000440192 MKRN3Q13064 507 aaKnown RBP10.19□□□□□ -0.78
SDCBPP1-201ENST00000440192 POTEJP0CG39 1038 aa10.16□□□□□ -0.78
SDCBPP1-201ENST00000440192 OCEL1Q9H607 264 aa10.16□□□□□ -0.78
SDCBPP1-201ENST00000440192 IRX5P78411 483 aaPredicted RBP10.14□□□□□ -0.79
SDCBPP1-201ENST00000440192 CABP2Q9NPB3 220 aa10.12□□□□□ -0.79
SDCBPP1-201ENST00000440192 RIOK3O14730 519 aaKnown RBP10.11□□□□□ -0.79
SDCBPP1-201ENST00000440192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.1□□□□□ -0.79
SDCBPP1-201ENST00000440192 TAOK2Q9UL54 1235 aa10.07□□□□□ -0.8
SDCBPP1-201ENST00000440192 VGFO15240 615 aaPredicted RBP10.06□□□□□ -0.8
SDCBPP1-201ENST00000440192 ECM2O94769 699 aaPredicted RBP10.06□□□□□ -0.8
SDCBPP1-201ENST00000440192 RNF25Q96BH1 459 aaPredicted RBP10.04□□□□□ -0.8
SDCBPP1-201ENST00000440192 L3MBTL3Q96JM7 780 aaPredicted RBP10.04□□□□□ -0.8
SDCBPP1-201ENST00000440192 SLAIN1Q8ND83 568 aa10.03□□□□□ -0.8
SDCBPP1-201ENST00000440192 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.02□□□□□ -0.81
SDCBPP1-201ENST00000440192 G3V3G9 751 aa10.02□□□□□ -0.81
SDCBPP1-201ENST00000440192 PDCD7Q8N8D1 485 aaKnown RBP10.02□□□□□ -0.81
SDCBPP1-201ENST00000440192 ZFP91Q96JP5 570 aaPredicted RBP10.02□□□□□ -0.81
SDCBPP1-201ENST00000440192 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
SDCBPP1-201ENST00000440192 C3orf67Q6ZVT6 689 aa10.01□□□□□ -0.81
SDCBPP1-201ENST00000440192 EFCAB3Q8N7B9 438 aa9.99□□□□□ -0.81
SDCBPP1-201ENST00000440192 FAM163AQ96GL9 167 aaPredicted RBP9.99□□□□□ -0.81
SDCBPP1-201ENST00000440192 PKD2Q13563 968 aa9.97□□□□□ -0.81
SDCBPP1-201ENST00000440192 DPY19L2Q6NUT2 758 aa9.94□□□□□ -0.82
SDCBPP1-201ENST00000440192 ILDR1Q86SU0 546 aaPredicted RBP9.94□□□□□ -0.82
SDCBPP1-201ENST00000440192 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
SDCBPP1-201ENST00000440192 STK24Q9Y6E0 443 aa9.94□□□□□ -0.82
SDCBPP1-201ENST00000440192 STK25O00506 426 aa9.93□□□□□ -0.82
SDCBPP1-201ENST00000440192 SOX12O15370 315 aa9.93□□□□□ -0.82
SDCBPP1-201ENST00000440192 RGL2O15211 777 aa9.92□□□□□ -0.82
SDCBPP1-201ENST00000440192 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
SDCBPP1-201ENST00000440192 POTEMA6NI47 508 aa9.9□□□□□ -0.82
SDCBPP1-201ENST00000440192 SNPHO15079 494 aa9.89□□□□□ -0.83
SDCBPP1-201ENST00000440192 POTEGQ6S5H5 508 aa9.89□□□□□ -0.83
SDCBPP1-201ENST00000440192 PHF8Q9UPP1 1060 aa9.87□□□□□ -0.83
SDCBPP1-201ENST00000440192 NLRP6P59044 892 aa9.86□□□□□ -0.83
SDCBPP1-201ENST00000440192 ST18O60284 1047 aa9.81□□□□□ -0.84
SDCBPP1-201ENST00000440192 LCE2DQ5TA82 110 aaPredicted RBP9.81□□□□□ -0.84
SDCBPP1-201ENST00000440192 MICALL2Q8IY33 904 aa9.8□□□□□ -0.84
SDCBPP1-201ENST00000440192 MS4A4AQ96JQ5 239 aa9.8□□□□□ -0.84
SDCBPP1-201ENST00000440192 TMEM121BQ9BXQ6 578 aaPredicted RBP9.79□□□□□ -0.84
SDCBPP1-201ENST00000440192 MFRPQ9BY79 579 aa9.77□□□□□ -0.85
SDCBPP1-201ENST00000440192 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
SDCBPP1-201ENST00000440192 FBXO22Q8NEZ5 403 aa9.76□□□□□ -0.85
SDCBPP1-201ENST00000440192 RTN4Q9NQC3 1192 aaKnown RBP9.76□□□□□ -0.85
SDCBPP1-201ENST00000440192 CHGAP10645 457 aaKnown RBP9.75□□□□□ -0.85
SDCBPP1-201ENST00000440192 PCDH10Q9P2E7 1040 aa9.75□□□□□ -0.85
SDCBPP1-201ENST00000440192 HS6ST3Q8IZP7 471 aa9.72□□□□□ -0.85
SDCBPP1-201ENST00000440192 ZNF710Q8N1W2 664 aa9.72□□□□□ -0.85
SDCBPP1-201ENST00000440192 PLSCR2Q9NRY7 297 aa9.72□□□□□ -0.85
SDCBPP1-201ENST00000440192 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.86
SDCBPP1-201ENST00000440192 DOK7Q18PE1 504 aa9.7□□□□□ -0.86
SDCBPP1-201ENST00000440192 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
SDCBPP1-201ENST00000440192 MARVELD3Q96A59 401 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms