RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TAOK2Q9UL54 1235 aa9.7□□□□□ -0.86
LSM1P1-201ENST00000438629 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
LSM1P1-201ENST00000438629 RGL2O15211 777 aa9.67□□□□□ -0.86
LSM1P1-201ENST00000438629 TSPYL2Q9H2G4 693 aaPredicted RBP9.64□□□□□ -0.87
LSM1P1-201ENST00000438629 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
LSM1P1-201ENST00000438629 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
LSM1P1-201ENST00000438629 PYGBP11216 843 aa9.59□□□□□ -0.87
LSM1P1-201ENST00000438629 BBXQ8WY36 941 aaPredicted RBP9.59□□□□□ -0.87
LSM1P1-201ENST00000438629 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.58□□□□□ -0.88
LSM1P1-201ENST00000438629 VGFO15240 615 aaPredicted RBP9.57□□□□□ -0.88
LSM1P1-201ENST00000438629 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
LSM1P1-201ENST00000438629 CCDC61Q9Y6R9 512 aa9.56□□□□□ -0.88
LSM1P1-201ENST00000438629 ZNF467Q7Z7K2 595 aaPredicted RBP9.55□□□□□ -0.88
LSM1P1-201ENST00000438629 RNF25Q96BH1 459 aaPredicted RBP9.55□□□□□ -0.88
LSM1P1-201ENST00000438629 CD44P16070 742 aaKnown RBP9.54□□□□□ -0.88
LSM1P1-201ENST00000438629 SGIP1Q9BQI5 828 aa9.53□□□□□ -0.88
LSM1P1-201ENST00000438629 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
LSM1P1-201ENST00000438629 HS6ST3Q8IZP7 471 aa9.52□□□□□ -0.89
LSM1P1-201ENST00000438629 ZRANB1Q9UGI0 708 aa9.52□□□□□ -0.89
LSM1P1-201ENST00000438629 ZNF579Q8NAF0 562 aaKnown RBP9.49□□□□□ -0.89
LSM1P1-201ENST00000438629 C19orf67A6NJJ6 358 aa9.48□□□□□ -0.89
LSM1P1-201ENST00000438629 STK25O00506 426 aa9.47□□□□□ -0.89
LSM1P1-201ENST00000438629 DNAJC5Q9H3Z4 198 aa9.47□□□□□ -0.89
LSM1P1-201ENST00000438629 PCDHB13Q9Y5F0 798 aa9.47□□□□□ -0.89
LSM1P1-201ENST00000438629 KIF12Q96FN5 646 aa9.46□□□□□ -0.9
LSM1P1-201ENST00000438629 PDAP1Q13442 181 aaKnown RBP9.45□□□□□ -0.9
LSM1P1-201ENST00000438629 SPRYD3Q8NCJ5 442 aa9.45□□□□□ -0.9
LSM1P1-201ENST00000438629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.44□□□□□ -0.9
LSM1P1-201ENST00000438629 MAP3K13O43283 966 aa9.44□□□□□ -0.9
LSM1P1-201ENST00000438629 ZFP91Q96JP5 570 aaPredicted RBP9.44□□□□□ -0.9
LSM1P1-201ENST00000438629 PCDHB8Q9UN66 801 aa9.43□□□□□ -0.9
LSM1P1-201ENST00000438629 HAX1O00165 279 aa9.42□□□□□ -0.9
LSM1P1-201ENST00000438629 CLCN6P51797 869 aa9.42□□□□□ -0.9
LSM1P1-201ENST00000438629 PAXIP1Q6ZW49 1069 aaPredicted RBP9.42□□□□□ -0.9
LSM1P1-201ENST00000438629 BCL11BQ9C0K0 894 aaPredicted RBP9.42□□□□□ -0.9
LSM1P1-201ENST00000438629 STK24Q9Y6E0 443 aa9.42□□□□□ -0.9
LSM1P1-201ENST00000438629 CFAP44Q96MT7 982 aa9.41□□□□□ -0.9
LSM1P1-201ENST00000438629 PSEN1P49768 467 aa9.4□□□□□ -0.9
LSM1P1-201ENST00000438629 IFNL1Q8IU54 200 aa9.4□□□□□ -0.9
LSM1P1-201ENST00000438629 RYDENQ9NUL5 291 aaKnown RBP9.4□□□□□ -0.9
LSM1P1-201ENST00000438629 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
LSM1P1-201ENST00000438629 HAP1P54257 671 aaPredicted RBP9.38□□□□□ -0.91
LSM1P1-201ENST00000438629 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
LSM1P1-201ENST00000438629 POTEHQ6S545 545 aa9.3□□□□□ -0.92
LSM1P1-201ENST00000438629 VSIG10Q8N0Z9 540 aa9.3□□□□□ -0.92
LSM1P1-201ENST00000438629 MS4A3Q96HJ5 214 aa9.3□□□□□ -0.92
LSM1P1-201ENST00000438629 GTPBP6O43824 516 aaPredicted RBP9.29□□□□□ -0.92
LSM1P1-201ENST00000438629 GOLGA2Q08379 1002 aa9.28□□□□□ -0.92
LSM1P1-201ENST00000438629 SOX12O15370 315 aa9.27□□□□□ -0.93
LSM1P1-201ENST00000438629 TIE1P35590 1138 aa9.27□□□□□ -0.93
LSM1P1-201ENST00000438629 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
LSM1P1-201ENST00000438629 CABP2Q9NPB3 220 aa9.26□□□□□ -0.93
LSM1P1-201ENST00000438629 EVX2Q03828 476 aa9.25□□□□□ -0.93
LSM1P1-201ENST00000438629 NLRP6P59044 892 aa9.23□□□□□ -0.93
LSM1P1-201ENST00000438629 EFCAB3Q8N7B9 438 aa9.23□□□□□ -0.93
LSM1P1-201ENST00000438629 TSHZ2Q9NRE2 1034 aa9.22□□□□□ -0.93
LSM1P1-201ENST00000438629 GALR2O43603 387 aaPredicted RBP9.21□□□□□ -0.94
LSM1P1-201ENST00000438629 MKRN3Q13064 507 aaKnown RBP9.21□□□□□ -0.94
LSM1P1-201ENST00000438629 TTLL13PA6NNM8 815 aa9.19□□□□□ -0.94
LSM1P1-201ENST00000438629 MFRPQ9BY79 579 aa9.19□□□□□ -0.94
LSM1P1-201ENST00000438629 TRPC6Q9Y210 931 aa9.19□□□□□ -0.94
LSM1P1-201ENST00000438629 BMP2KQ9NSY1 1161 aaPredicted RBP9.17□□□□□ -0.94
LSM1P1-201ENST00000438629 GABBR2O75899 941 aa9.16□□□□□ -0.94
LSM1P1-201ENST00000438629 PHF8Q9UPP1 1060 aa9.15□□□□□ -0.94
LSM1P1-201ENST00000438629 FBXO22Q8NEZ5 403 aa9.14□□□□□ -0.95
LSM1P1-201ENST00000438629 TRIM35Q9UPQ4 493 aa9.13□□□□□ -0.95
LSM1P1-201ENST00000438629 ASTLQ6HA08 431 aaPredicted RBP9.12□□□□□ -0.95
LSM1P1-201ENST00000438629 DCBLD2Q96PD2 775 aa9.12□□□□□ -0.95
LSM1P1-201ENST00000438629 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
LSM1P1-201ENST00000438629 ATMINO43313 823 aaPredicted RBP9.11□□□□□ -0.95
LSM1P1-201ENST00000438629 IER5LQ5T953 404 aa9.1□□□□□ -0.95
LSM1P1-201ENST00000438629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.1□□□□□ -0.95
LSM1P1-201ENST00000438629 ATN1P54259 1190 aaPredicted RBP9.09□□□□□ -0.95
LSM1P1-201ENST00000438629 ILDR1Q86SU0 546 aaPredicted RBP9.07□□□□□ -0.96
LSM1P1-201ENST00000438629 SP7Q8TDD2 431 aaPredicted RBP9.07□□□□□ -0.96
LSM1P1-201ENST00000438629 PPP1R37O75864 691 aa9.06□□□□□ -0.96
LSM1P1-201ENST00000438629 MS4A4AQ96JQ5 239 aa9.05□□□□□ -0.96
LSM1P1-201ENST00000438629 OCEL1Q9H607 264 aa9.05□□□□□ -0.96
LSM1P1-201ENST00000438629 WDR70Q9NW82 654 aa9.05□□□□□ -0.96
LSM1P1-201ENST00000438629 BCANQ96GW7 911 aa9.02□□□□□ -0.97
LSM1P1-201ENST00000438629 IRX5P78411 483 aaPredicted RBP9.01□□□□□ -0.97
LSM1P1-201ENST00000438629 SLC39A7Q92504 469 aa9.01□□□□□ -0.97
LSM1P1-201ENST00000438629 G3V3G9 751 aa9□□□□□ -0.97
LSM1P1-201ENST00000438629 SEC24BO95487 1268 aa9□□□□□ -0.97
LSM1P1-201ENST00000438629 C7P10643 843 aa9□□□□□ -0.97
LSM1P1-201ENST00000438629 PLCG2P16885 1265 aa9□□□□□ -0.97
LSM1P1-201ENST00000438629 PDE4AP27815 886 aa8.99□□□□□ -0.97
LSM1P1-201ENST00000438629 CADPS2Q86UW7 1296 aa8.98□□□□□ -0.97
LSM1P1-201ENST00000438629 L3MBTL3Q96JM7 780 aaPredicted RBP8.98□□□□□ -0.97
LSM1P1-201ENST00000438629 PDCD7Q8N8D1 485 aaKnown RBP8.97□□□□□ -0.97
LSM1P1-201ENST00000438629 P3H3Q8IVL6 736 aa8.96□□□□□ -0.98
LSM1P1-201ENST00000438629 PELP1Q8IZL8 1130 aaKnown RBP8.95□□□□□ -0.98
LSM1P1-201ENST00000438629 DPY19L2Q6NUT2 758 aa8.94□□□□□ -0.98
LSM1P1-201ENST00000438629 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
LSM1P1-201ENST00000438629 MICALL2Q8IY33 904 aa8.92□□□□□ -0.98
LSM1P1-201ENST00000438629 LARP6Q9BRS8 491 aaKnown RBP8.92□□□□□ -0.98
LSM1P1-201ENST00000438629 POTEIP0CG38 1075 aa8.91□□□□□ -0.98
LSM1P1-201ENST00000438629 NBR1Q14596 966 aa8.91□□□□□ -0.98
LSM1P1-201ENST00000438629 TMEM121BQ9BXQ6 578 aaPredicted RBP8.91□□□□□ -0.98
LSM1P1-201ENST00000438629 CRISPLD2Q9H0B8 497 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms