RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 TSPY4P0CV99 314 aa13.86□□□□□ -0.19
SHPRH-206ENST00000438092 TSPY10P0CW01 314 aa13.86□□□□□ -0.19
SHPRH-206ENST00000438092 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
SHPRH-206ENST00000438092 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
SHPRH-206ENST00000438092 RRP7BPQ9NSQ0 103 aa13.85□□□□□ -0.19
SHPRH-206ENST00000438092 CCDC136Q96JN2 1154 aa13.85□□□□□ -0.19
SHPRH-206ENST00000438092 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
SHPRH-206ENST00000438092 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.2
SHPRH-206ENST00000438092 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
SHPRH-206ENST00000438092 MRS2Q9HD23 443 aa13.82□□□□□ -0.2
SHPRH-206ENST00000438092 MYH16Q9H6N6 1097 aa13.78□□□□□ -0.2
SHPRH-206ENST00000438092 MTUS2Q5JR59 1369 aa13.78□□□□□ -0.2
SHPRH-206ENST00000438092 CDK11BP21127 795 aaKnown RBP13.76□□□□□ -0.21
SHPRH-206ENST00000438092 LAS1LQ9Y4W2 734 aaKnown RBP13.76□□□□□ -0.21
SHPRH-206ENST00000438092 NPHP1O15259 732 aa13.73□□□□□ -0.21
SHPRH-206ENST00000438092 NEUROD2Q15784 382 aa13.71□□□□□ -0.21
SHPRH-206ENST00000438092 TNNT2P45379 298 aaPredicted RBP13.71□□□□□ -0.22
SHPRH-206ENST00000438092 TRHP20396 242 aaPredicted RBP13.7□□□□□ -0.22
SHPRH-206ENST00000438092 SOX12O15370 315 aa13.67□□□□□ -0.22
SHPRH-206ENST00000438092 MLECQ14165 292 aa13.66□□□□□ -0.22
SHPRH-206ENST00000438092 NCLP19338 710 aaKnown RBP13.65□□□□□ -0.22
SHPRH-206ENST00000438092 PLEKHD1A6NEE1 506 aa13.63□□□□□ -0.23
SHPRH-206ENST00000438092 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
SHPRH-206ENST00000438092 MIER1Q8N108 512 aa13.63□□□□□ -0.23
SHPRH-206ENST00000438092 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.23
SHPRH-206ENST00000438092 POGKQ9P215 609 aa13.6□□□□□ -0.23
SHPRH-206ENST00000438092 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
SHPRH-206ENST00000438092 KNSTRNQ9Y448 316 aa13.57□□□□□ -0.24
SHPRH-206ENST00000438092 SAFB2Q14151 953 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■□□□□ 10.6
SHPRH-206ENST00000438092 NAP1L2Q9ULW6 460 aaPredicted RBP13.56□□□□□ -0.24
SHPRH-206ENST00000438092 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
SHPRH-206ENST00000438092 CC2D1BQ5T0F9 858 aaKnown RBP13.56□□□□□ -0.24
SHPRH-206ENST00000438092 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
SHPRH-206ENST00000438092 CFDP1Q9UEE9 299 aaPredicted RBP13.55□□□□□ -0.24
SHPRH-206ENST00000438092 U2SURPO15042 1029 aaKnown RBP13.54□□□□□ -0.24
SHPRH-206ENST00000438092 FRAT1Q92837 279 aaPredicted RBP13.54□□□□□ -0.24
SHPRH-206ENST00000438092 CARD11Q9BXL7 1154 aa13.54□□□□□ -0.24
SHPRH-206ENST00000438092 OS9Q13438 667 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-206ENST00000438092 CLIP1P30622 1438 aa13.52□□□□□ -0.24
SHPRH-206ENST00000438092 ERCC6Q03468 1493 aa13.52□□□□□ -0.24
SHPRH-206ENST00000438092 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.25
SHPRH-206ENST00000438092 ZRSR1Q15695 479 aaKnown RBP13.51□□□□□ -0.25
SHPRH-206ENST00000438092 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
SHPRH-206ENST00000438092 GOLGA2Q08379 1002 aa13.49□□□□□ -0.25
SHPRH-206ENST00000438092 BECN1Q14457 450 aa13.49□□□□□ -0.25
SHPRH-206ENST00000438092 RGS3P49796 1198 aa13.49□□□□□ -0.25
SHPRH-206ENST00000438092 ISY1Q9ULR0 285 aaKnown RBP13.48□□□□□ -0.25
SHPRH-206ENST00000438092 CASC1Q6TDU7 716 aa13.48□□□□□ -0.25
SHPRH-206ENST00000438092 PTMAP06454 111 aaKnown RBP13.48□□□□□ -0.25
SHPRH-206ENST00000438092 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
SHPRH-206ENST00000438092 SUPT16HQ9Y5B9 1047 aaKnown RBP13.48□□□□□ -0.25
SHPRH-206ENST00000438092 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
SHPRH-206ENST00000438092 CLSTN1O94985 981 aa13.47□□□□□ -0.25
SHPRH-206ENST00000438092 FGD1P98174 961 aa13.46□□□□□ -0.25
SHPRH-206ENST00000438092 STK26Q9P289 416 aa13.46□□□□□ -0.26
SHPRH-206ENST00000438092 SIN3AQ96ST3 1273 aa13.45□□□□□ -0.26
SHPRH-206ENST00000438092 DNTTIP2Q5QJE6 756 aaKnown RBP13.44□□□□□ -0.26
SHPRH-206ENST00000438092 KCNJ4P48050 445 aa13.44□□□□□ -0.26
SHPRH-206ENST00000438092 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
SHPRH-206ENST00000438092 GOLGA6L22H0YM25 854 aa13.44□□□□□ -0.26
SHPRH-206ENST00000438092 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
SHPRH-206ENST00000438092 SRPK2P78362 688 aaKnown RBP13.43□□□□□ -0.26
SHPRH-206ENST00000438092 PAK3O75914 559 aaPredicted RBP13.43□□□□□ -0.26
SHPRH-206ENST00000438092 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
SHPRH-206ENST00000438092 NUDCQ9Y266 331 aa13.42□□□□□ -0.26
SHPRH-206ENST00000438092 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
SHPRH-206ENST00000438092 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
SHPRH-206ENST00000438092 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.26
SHPRH-206ENST00000438092 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
SHPRH-206ENST00000438092 APBB1O00213 710 aa13.4□□□□□ -0.27
SHPRH-206ENST00000438092 GGT6Q6P531 493 aa13.39□□□□□ -0.27
SHPRH-206ENST00000438092 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
SHPRH-206ENST00000438092 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
SHPRH-206ENST00000438092 DCAF1Q9Y4B6 1507 aa13.36□□□□□ -0.27
SHPRH-206ENST00000438092 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
SHPRH-206ENST00000438092 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
SHPRH-206ENST00000438092 CEP162Q5TB80 1403 aa13.34□□□□□ -0.27
SHPRH-206ENST00000438092 CSB-PGBD3P0DP91 1061 aa13.33□□□□□ -0.28
SHPRH-206ENST00000438092 FOXD1Q16676 465 aa13.33□□□□□ -0.28
SHPRH-206ENST00000438092 GOLGA3Q08378 1498 aa13.33□□□□□ -0.28
SHPRH-206ENST00000438092 BAZ1BQ9UIG0 1483 aaKnown RBP13.32□□□□□ -0.28
SHPRH-206ENST00000438092 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
SHPRH-206ENST00000438092 NUTM2DQ5VT03 806 aaPredicted RBP13.31□□□□□ -0.28
SHPRH-206ENST00000438092 RB1CC1Q8TDY2 1594 aa13.31□□□□□ -0.28
SHPRH-206ENST00000438092 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
SHPRH-206ENST00000438092 RTF1Q92541 710 aaKnown RBP13.29□□□□□ -0.28
SHPRH-206ENST00000438092 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
SHPRH-206ENST00000438092 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
SHPRH-206ENST00000438092 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
SHPRH-206ENST00000438092 NUTM2FA1L443 756 aa13.27□□□□□ -0.28
SHPRH-206ENST00000438092 TMF1P82094 1093 aa13.27□□□□□ -0.28
SHPRH-206ENST00000438092 KANK1Q14678 1352 aa13.27□□□□□ -0.29
SHPRH-206ENST00000438092 KIF27Q86VH2 1401 aa13.26□□□□□ -0.29
SHPRH-206ENST00000438092 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
SHPRH-206ENST00000438092 NAP1L5Q96NT1 182 aaPredicted RBP13.25□□□□□ -0.29
SHPRH-206ENST00000438092 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
SHPRH-206ENST00000438092 GOLGA6L4A6NEF3 574 aa13.25□□□□□ -0.29
SHPRH-206ENST00000438092 ERICH6BQ5W0A0 696 aa13.24□□□□□ -0.29
SHPRH-206ENST00000438092 ANO8Q9HCE9 1232 aaPredicted RBP13.24□□□□□ -0.29
SHPRH-206ENST00000438092 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms