RNA–Protein interactions for RNA: ENST00000436760.1

KPNA3-202, Transcript of karyopherin subunit alpha 3, humanhuman

TSL 2

Gene KPNA3, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-202ENST00000436760 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
KPNA3-202ENST00000436760 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
KPNA3-202ENST00000436760 PELP1Q8IZL8 1130 aaKnown RBP11.79□□□□□ -0.52
KPNA3-202ENST00000436760 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
KPNA3-202ENST00000436760 POTEMA6NI47 508 aa11.77□□□□□ -0.53
KPNA3-202ENST00000436760 C7P10643 843 aa11.73□□□□□ -0.53
KPNA3-202ENST00000436760 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
KPNA3-202ENST00000436760 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
KPNA3-202ENST00000436760 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
KPNA3-202ENST00000436760 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
KPNA3-202ENST00000436760 METRNQ9UJH8 293 aa11.72□□□□□ -0.53
KPNA3-202ENST00000436760 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
KPNA3-202ENST00000436760 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
KPNA3-202ENST00000436760 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
KPNA3-202ENST00000436760 MIER1Q8N108 512 aa11.67□□□□□ -0.54
KPNA3-202ENST00000436760 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
KPNA3-202ENST00000436760 SPOCK2Q92563 424 aa11.66□□□□□ -0.54
KPNA3-202ENST00000436760 POTEJP0CG39 1038 aa11.65□□□□□ -0.54
KPNA3-202ENST00000436760 PKD2Q13563 968 aa11.63□□□□□ -0.55
KPNA3-202ENST00000436760 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
KPNA3-202ENST00000436760 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
KPNA3-202ENST00000436760 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
KPNA3-202ENST00000436760 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
KPNA3-202ENST00000436760 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
KPNA3-202ENST00000436760 LCE2DQ5TA82 110 aaPredicted RBP11.56□□□□□ -0.56
KPNA3-202ENST00000436760 TSPYL2Q9H2G4 693 aaPredicted RBP11.56□□□□□ -0.56
KPNA3-202ENST00000436760 SCUBE2Q9NQ36 999 aa11.56□□□□□ -0.56
KPNA3-202ENST00000436760 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
KPNA3-202ENST00000436760 BMP2KQ9NSY1 1161 aaPredicted RBP11.51□□□□□ -0.57
KPNA3-202ENST00000436760 TIE1P35590 1138 aa11.5□□□□□ -0.57
KPNA3-202ENST00000436760 POTEFA5A3E0 1075 aa11.49□□□□□ -0.57
KPNA3-202ENST00000436760 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
KPNA3-202ENST00000436760 FAM163AQ96GL9 167 aaPredicted RBP11.44□□□□□ -0.58
KPNA3-202ENST00000436760 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
KPNA3-202ENST00000436760 MAP3K13O43283 966 aa11.43□□□□□ -0.58
KPNA3-202ENST00000436760 NUBP1P53384 320 aa11.39□□□□□ -0.59
KPNA3-202ENST00000436760 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
KPNA3-202ENST00000436760 SGIP1Q9BQI5 828 aa11.39□□□□□ -0.59
KPNA3-202ENST00000436760 TTLL13PA6NNM8 815 aa11.38□□□□□ -0.59
KPNA3-202ENST00000436760 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
KPNA3-202ENST00000436760 DCAF8L2P0C7V8 631 aa11.37□□□□□ -0.59
KPNA3-202ENST00000436760 IER5LQ5T953 404 aa11.37□□□□□ -0.59
KPNA3-202ENST00000436760 TRIM41Q8WV44 630 aa11.35□□□□□ -0.59
KPNA3-202ENST00000436760 COLQQ9Y215 455 aaPredicted RBP11.35□□□□□ -0.59
KPNA3-202ENST00000436760 RGL2O15211 777 aa11.34□□□□□ -0.59
KPNA3-202ENST00000436760 SEC24BO95487 1268 aa11.33□□□□□ -0.6
KPNA3-202ENST00000436760 GSE1Q14687 1217 aa11.33□□□□□ -0.6
KPNA3-202ENST00000436760 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
KPNA3-202ENST00000436760 TRIM35Q9UPQ4 493 aa11.29□□□□□ -0.6
KPNA3-202ENST00000436760 PCDHB13Q9Y5F0 798 aa11.27□□□□□ -0.61
KPNA3-202ENST00000436760 DCAF8Q5TAQ9 597 aa11.26□□□□□ -0.61
KPNA3-202ENST00000436760 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
KPNA3-202ENST00000436760 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
KPNA3-202ENST00000436760 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
KPNA3-202ENST00000436760 IFNL1Q8IU54 200 aa11.2□□□□□ -0.62
KPNA3-202ENST00000436760 SLAIN1Q8ND83 568 aa11.2□□□□□ -0.62
KPNA3-202ENST00000436760 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
KPNA3-202ENST00000436760 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
KPNA3-202ENST00000436760 ST18O60284 1047 aa11.18□□□□□ -0.62
KPNA3-202ENST00000436760 PLCG2P16885 1265 aa11.16□□□□□ -0.62
KPNA3-202ENST00000436760 TMEM106CQ9BVX2 250 aa11.16□□□□□ -0.62
KPNA3-202ENST00000436760 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
KPNA3-202ENST00000436760 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
KPNA3-202ENST00000436760 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
KPNA3-202ENST00000436760 CHGAP10645 457 aaKnown RBP11.13□□□□□ -0.63
KPNA3-202ENST00000436760 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
KPNA3-202ENST00000436760 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
KPNA3-202ENST00000436760 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
KPNA3-202ENST00000436760 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
KPNA3-202ENST00000436760 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
KPNA3-202ENST00000436760 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
KPNA3-202ENST00000436760 PYGBP11216 843 aa11.07□□□□□ -0.64
KPNA3-202ENST00000436760 PAXIP1Q6ZW49 1069 aaPredicted RBP11.07□□□□□ -0.64
KPNA3-202ENST00000436760 SNPHO15079 494 aa11.06□□□□□ -0.64
KPNA3-202ENST00000436760 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
KPNA3-202ENST00000436760 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
KPNA3-202ENST00000436760 CFAP44Q96MT7 982 aa11.03□□□□□ -0.64
KPNA3-202ENST00000436760 MMRN1Q13201 1228 aa11.01□□□□□ -0.65
KPNA3-202ENST00000436760 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
KPNA3-202ENST00000436760 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
KPNA3-202ENST00000436760 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
KPNA3-202ENST00000436760 STK25O00506 426 aa10.97□□□□□ -0.65
KPNA3-202ENST00000436760 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
KPNA3-202ENST00000436760 NKX1-1Q15270 411 aaPredicted RBP10.96□□□□□ -0.65
KPNA3-202ENST00000436760 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
KPNA3-202ENST00000436760 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
KPNA3-202ENST00000436760 BCL11BQ9C0K0 894 aaPredicted RBP10.93□□□□□ -0.66
KPNA3-202ENST00000436760 PDCD7Q8N8D1 485 aaKnown RBP10.92□□□□□ -0.66
KPNA3-202ENST00000436760 PCDHB8Q9UN66 801 aa10.92□□□□□ -0.66
KPNA3-202ENST00000436760 MARVELD3Q96A59 401 aa10.9□□□□□ -0.66
KPNA3-202ENST00000436760 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
KPNA3-202ENST00000436760 STK24Q9Y6E0 443 aa10.9□□□□□ -0.66
KPNA3-202ENST00000436760 GTPBP6O43824 516 aaPredicted RBP10.89□□□□□ -0.67
KPNA3-202ENST00000436760 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
KPNA3-202ENST00000436760 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
KPNA3-202ENST00000436760 L3MBTL3Q96JM7 780 aaPredicted RBP10.88□□□□□ -0.67
KPNA3-202ENST00000436760 C3orf67Q6ZVT6 689 aa10.87□□□□□ -0.67
KPNA3-202ENST00000436760 EMP3P54852 163 aa10.84□□□□□ -0.67
KPNA3-202ENST00000436760 MKRN3Q13064 507 aaKnown RBP10.83□□□□□ -0.68
KPNA3-202ENST00000436760 PSEN1P49768 467 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 345 ms