RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 RTL5Q5HYW3 569 aaPredicted RBP15.1■□□□□ 0.01
CCDC171-202ENST00000432954 TAOK2Q9UL54 1235 aa15.1■□□□□ 0.01
CCDC171-202ENST00000432954 WASHC2AQ641Q2 1341 aa15.06■□□□□ 0
CCDC171-202ENST00000432954 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
CCDC171-202ENST00000432954 HSP90B1P14625 803 aaKnown RBP15.03■□□□□ -0
CCDC171-202ENST00000432954 NBR1Q14596 966 aa15.03■□□□□ -0
CCDC171-202ENST00000432954 HSP90AA2PQ14568 343 aaPredicted RBP15.02■□□□□ -0
CCDC171-202ENST00000432954 BBXQ8WY36 941 aaPredicted RBP15.02□□□□□ -0.01
CCDC171-202ENST00000432954 PRDM4Q9UKN5 801 aa15.01□□□□□ -0.01
CCDC171-202ENST00000432954 CHRM1P11229 460 aaPredicted RBP15□□□□□ -0.01
CCDC171-202ENST00000432954 GTF2E1P29083 439 aaPredicted RBP15□□□□□ -0.01
CCDC171-202ENST00000432954 FAM43AQ8N2R8 423 aa15□□□□□ -0.01
CCDC171-202ENST00000432954 CHMP4BQ9H444 224 aaKnown RBP15□□□□□ -0.01
CCDC171-202ENST00000432954 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
CCDC171-202ENST00000432954 CALD1Q05682 793 aaKnown RBP14.98□□□□□ -0.01
CCDC171-202ENST00000432954 TEX2Q8IWB9 1127 aa14.98□□□□□ -0.01
CCDC171-202ENST00000432954 BCANQ96GW7 911 aa14.96□□□□□ -0.01
CCDC171-202ENST00000432954 CDK11BP21127 795 aaKnown RBP14.95□□□□□ -0.02
CCDC171-202ENST00000432954 FKBP8Q14318 412 aa14.95□□□□□ -0.02
CCDC171-202ENST00000432954 ZFP91Q96JP5 570 aaPredicted RBP14.95□□□□□ -0.02
CCDC171-202ENST00000432954 CENPJQ9HC77 1338 aaPredicted RBP14.93□□□□□ -0.02
CCDC171-202ENST00000432954 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
CCDC171-202ENST00000432954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
CCDC171-202ENST00000432954 USP35Q9P2H5 1018 aa14.92□□□□□ -0.02
CCDC171-202ENST00000432954 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
CCDC171-202ENST00000432954 STAC3Q96MF2 364 aa14.91□□□□□ -0.02
CCDC171-202ENST00000432954 FTSJ3Q8IY81 847 aaKnown RBP14.9□□□□□ -0.02
CCDC171-202ENST00000432954 BRPF3Q9ULD4 1205 aa14.87□□□□□ -0.03
CCDC171-202ENST00000432954 CNGB1Q14028 1251 aaPredicted RBP14.85□□□□□ -0.03
CCDC171-202ENST00000432954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.84□□□□□ -0.03
CCDC171-202ENST00000432954 SECISBP2LQ93073 1101 aaKnown RBP14.83□□□□□ -0.04
CCDC171-202ENST00000432954 HSP90AA1P07900 732 aaKnown RBP14.83□□□□□ -0.04
CCDC171-202ENST00000432954 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
CCDC171-202ENST00000432954 TPRNQ4KMQ1 711 aa14.8□□□□□ -0.04
CCDC171-202ENST00000432954 ARID4BQ4LE39 1312 aaPredicted RBP14.78□□□□□ -0.04
CCDC171-202ENST00000432954 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
CCDC171-202ENST00000432954 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
CCDC171-202ENST00000432954 NCLP19338 710 aaKnown RBP14.77□□□□□ -0.05
CCDC171-202ENST00000432954 NEFMP07197 916 aa14.76□□□□□ -0.05
CCDC171-202ENST00000432954 RGS3P49796 1198 aa14.76□□□□□ -0.05
CCDC171-202ENST00000432954 IRX6P78412 446 aaPredicted RBP14.76□□□□□ -0.05
CCDC171-202ENST00000432954 ITGAEP38570 1179 aa14.75□□□□□ -0.05
CCDC171-202ENST00000432954 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
CCDC171-202ENST00000432954 SUPT5HO00267 1087 aaKnown RBP14.71□□□□□ -0.05
CCDC171-202ENST00000432954 PDCL3Q9H2J4 239 aa14.68□□□□□ -0.06
CCDC171-202ENST00000432954 IPO9Q96P70 1041 aaKnown RBP14.67□□□□□ -0.06
CCDC171-202ENST00000432954 CNPY4Q8N129 248 aa14.67□□□□□ -0.06
CCDC171-202ENST00000432954 GSE1Q14687 1217 aa14.66□□□□□ -0.06
CCDC171-202ENST00000432954 FOXD1Q16676 465 aa14.63□□□□□ -0.07
CCDC171-202ENST00000432954 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
CCDC171-202ENST00000432954 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
CCDC171-202ENST00000432954 KCNA4P22459 653 aa14.6□□□□□ -0.07
CCDC171-202ENST00000432954 TICAM2Q86XR7 235 aa14.59□□□□□ -0.07
CCDC171-202ENST00000432954 TMEM51Q9NW97 253 aa14.59□□□□□ -0.07
CCDC171-202ENST00000432954 KCNG1Q9UIX4 513 aa14.58□□□□□ -0.07
CCDC171-202ENST00000432954 CCDC9Q9Y3X0 531 aaKnown RBP14.58□□□□□ -0.08
CCDC171-202ENST00000432954 ANP32AP39687 249 aaKnown RBP14.56□□□□□ -0.08
CCDC171-202ENST00000432954 RGS22Q8NE09 1264 aa14.56□□□□□ -0.08
CCDC171-202ENST00000432954 SMAP1Q8IYB5 467 aaPredicted RBP14.56□□□□□ -0.08
CCDC171-202ENST00000432954 POLR3GLQ9BT43 218 aa14.55□□□□□ -0.08
CCDC171-202ENST00000432954 HMGB1P09429 215 aaKnown RBP14.54□□□□□ -0.08
CCDC171-202ENST00000432954 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
CCDC171-202ENST00000432954 GRIPAP1Q4V328 841 aa14.53□□□□□ -0.08
CCDC171-202ENST00000432954 WWC1Q8IX03 1113 aa14.53□□□□□ -0.08
CCDC171-202ENST00000432954 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.53□□□□□ -0.08
CCDC171-202ENST00000432954 TMEM132AQ24JP5 1023 aa14.52□□□□□ -0.08
CCDC171-202ENST00000432954 MMP14P50281 582 aa14.51□□□□□ -0.09
CCDC171-202ENST00000432954 RRAGDQ9NQL2 400 aaPredicted RBP14.51□□□□□ -0.09
CCDC171-202ENST00000432954 UTP14CQ5TAP6 766 aaKnown RBP14.51□□□□□ -0.09
CCDC171-202ENST00000432954 PLCD3Q8N3E9 789 aa14.51□□□□□ -0.09
CCDC171-202ENST00000432954 ARID3AQ99856 593 aa14.51□□□□□ -0.09
CCDC171-202ENST00000432954 PNNQ9H307 717 aaKnown RBP14.49□□□□□ -0.09
CCDC171-202ENST00000432954 CLGNO14967 610 aa14.48□□□□□ -0.09
CCDC171-202ENST00000432954 PRDM10Q9NQV6 1147 aa14.47□□□□□ -0.09
CCDC171-202ENST00000432954 TPM2P07951 284 aa14.46□□□□□ -0.09
CCDC171-202ENST00000432954 CLCN1P35523 988 aa14.46□□□□□ -0.09
CCDC171-202ENST00000432954 PTMAP06454 111 aaKnown RBP14.46□□□□□ -0.1
CCDC171-202ENST00000432954 IRX3P78415 501 aaPredicted RBP14.45□□□□□ -0.1
CCDC171-202ENST00000432954 IGSF3O75054 1194 aa14.44□□□□□ -0.1
CCDC171-202ENST00000432954 ANP32BQ92688 251 aaKnown RBP14.44□□□□□ -0.1
CCDC171-202ENST00000432954 DDRGK1Q96HY6 314 aa14.44□□□□□ -0.1
CCDC171-202ENST00000432954 CLSTN1O94985 981 aa14.44□□□□□ -0.1
CCDC171-202ENST00000432954 FRAT1Q92837 279 aaPredicted RBP14.43□□□□□ -0.1
CCDC171-202ENST00000432954 ZCCHC6Q5VYS8 1495 aaKnown RBP14.42□□□□□ -0.1
CCDC171-202ENST00000432954 FAM193AP78312 1265 aa14.41□□□□□ -0.1
CCDC171-202ENST00000432954 MAP7D2Q96T17 732 aa14.41□□□□□ -0.1
CCDC171-202ENST00000432954 DCAF11Q8TEB1 546 aa14.4□□□□□ -0.1
CCDC171-202ENST00000432954 MCCP23508 829 aa14.4□□□□□ -0.1
CCDC171-202ENST00000432954 PPP4R2Q9NY27 417 aa14.39□□□□□ -0.11
CCDC171-202ENST00000432954 ZNF622Q969S3 477 aaKnown RBP eCLIP14.39□□□□□ -0.11
CCDC171-202ENST00000432954 PPP4R3BQ5MIZ7 849 aa14.38□□□□□ -0.11
CCDC171-202ENST00000432954 AXDND1Q5T1B0 1012 aaPredicted RBP14.37□□□□□ -0.11
CCDC171-202ENST00000432954 VGLL3A8MV65 326 aa14.36□□□□□ -0.11
CCDC171-202ENST00000432954 DMTNQ08495 405 aa14.36□□□□□ -0.11
CCDC171-202ENST00000432954 PLCD4Q9BRC7 762 aa14.36□□□□□ -0.11
CCDC171-202ENST00000432954 TMED8Q6PL24 325 aaPredicted RBP14.34□□□□□ -0.11
CCDC171-202ENST00000432954 ZNF592Q92610 1267 aa14.34□□□□□ -0.11
CCDC171-202ENST00000432954 HDAC5Q9UQL6 1122 aa14.34□□□□□ -0.11
CCDC171-202ENST00000432954 ZHX1Q9UKY1 873 aaPredicted RBP14.33□□□□□ -0.11
CCDC171-202ENST00000432954 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms