RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 CHRDL2Q6WN34 429 aa6.21□□□□□ -1.42
CCDC30-203ENST00000428554 CLEC11AQ9Y240 323 aa6.21□□□□□ -1.42
CCDC30-203ENST00000428554 RGL2O15211 777 aa6.18□□□□□ -1.42
CCDC30-203ENST00000428554 TMEM132AQ24JP5 1023 aa6.18□□□□□ -1.42
CCDC30-203ENST00000428554 NPM1P06748 294 aaKnown RBP eCLIP6.17□□□□□ -1.42
CCDC30-203ENST00000428554 PRR29P0C7W0 189 aa6.16□□□□□ -1.42
CCDC30-203ENST00000428554 CIZ1Q9ULV3 898 aaPredicted RBP6.15□□□□□ -1.42
CCDC30-203ENST00000428554 PLEKHG5O94827 1062 aa6.14□□□□□ -1.43
CCDC30-203ENST00000428554 PODXL2Q9NZ53 605 aa6.13□□□□□ -1.43
CCDC30-203ENST00000428554 FXR2P51116 673 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCDC30-203ENST00000428554 ZBTB47Q9UFB7 747 aaPredicted RBP6.12□□□□□ -1.43
CCDC30-203ENST00000428554 PIP4P2Q8N4L2 257 aa6.12□□□□□ -1.43
CCDC30-203ENST00000428554 CREBZFQ9NS37 354 aa6.11□□□□□ -1.43
CCDC30-203ENST00000428554 NUBP1P53384 320 aa6.1□□□□□ -1.43
CCDC30-203ENST00000428554 BBXQ8WY36 941 aaPredicted RBP6.1□□□□□ -1.43
CCDC30-203ENST00000428554 KDM2AQ9Y2K7 1162 aa6.09□□□□□ -1.43
CCDC30-203ENST00000428554 MNX1P50219 401 aaPredicted RBP6.09□□□□□ -1.44
CCDC30-203ENST00000428554 PRKAR2AP13861 404 aaKnown RBP6.07□□□□□ -1.44
CCDC30-203ENST00000428554 PAXIP1Q6ZW49 1069 aaPredicted RBP6.07□□□□□ -1.44
CCDC30-203ENST00000428554 RNF25Q96BH1 459 aaPredicted RBP6.07□□□□□ -1.44
CCDC30-203ENST00000428554 CHGAP10645 457 aaKnown RBP6.06□□□□□ -1.44
CCDC30-203ENST00000428554 CFAP44Q96MT7 982 aa6.06□□□□□ -1.44
CCDC30-203ENST00000428554 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.06□□□□□ -1.44
CCDC30-203ENST00000428554 C14orf37Q86TY3 774 aa6.05□□□□□ -1.44
CCDC30-203ENST00000428554 DCAF8Q5TAQ9 597 aa6.05□□□□□ -1.44
CCDC30-203ENST00000428554 GSE1Q14687 1217 aa6.04□□□□□ -1.44
CCDC30-203ENST00000428554 CHADLQ6NUI6 762 aa6.04□□□□□ -1.44
CCDC30-203ENST00000428554 NPM2Q86SE8 214 aaKnown RBP6.04□□□□□ -1.44
CCDC30-203ENST00000428554 RASEFQ8IZ41 740 aa6.03□□□□□ -1.44
CCDC30-203ENST00000428554 TRIM41Q8WV44 630 aa6.03□□□□□ -1.44
CCDC30-203ENST00000428554 SP7Q8TDD2 431 aaPredicted RBP6.02□□□□□ -1.45
CCDC30-203ENST00000428554 FARP1Q9Y4F1 1045 aaPredicted RBP6.01□□□□□ -1.45
CCDC30-203ENST00000428554 HS6ST3Q8IZP7 471 aa6□□□□□ -1.45
CCDC30-203ENST00000428554 SPRYD3Q8NCJ5 442 aa6□□□□□ -1.45
CCDC30-203ENST00000428554 FAM212AQ96EL1 285 aa6□□□□□ -1.45
CCDC30-203ENST00000428554 TSHZ2Q9NRE2 1034 aa6□□□□□ -1.45
CCDC30-203ENST00000428554 PLSCR2Q9NRY7 297 aa5.99□□□□□ -1.45
CCDC30-203ENST00000428554 RIOK3O14730 519 aaKnown RBP5.98□□□□□ -1.45
CCDC30-203ENST00000428554 NKX1-1Q15270 411 aaPredicted RBP5.97□□□□□ -1.45
CCDC30-203ENST00000428554 PYGBP11216 843 aa5.97□□□□□ -1.45
CCDC30-203ENST00000428554 CHRM1P11229 460 aaPredicted RBP5.95□□□□□ -1.46
CCDC30-203ENST00000428554 HAX1O00165 279 aa5.94□□□□□ -1.46
CCDC30-203ENST00000428554 STK25O00506 426 aa5.93□□□□□ -1.46
CCDC30-203ENST00000428554 VGFO15240 615 aaPredicted RBP5.93□□□□□ -1.46
CCDC30-203ENST00000428554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.92□□□□□ -1.46
CCDC30-203ENST00000428554 C19orf67A6NJJ6 358 aa5.92□□□□□ -1.46
CCDC30-203ENST00000428554 ZFP91Q96JP5 570 aaPredicted RBP5.92□□□□□ -1.46
CCDC30-203ENST00000428554 TSPYL2Q9H2G4 693 aaPredicted RBP5.92□□□□□ -1.46
CCDC30-203ENST00000428554 TRIM26Q12899 539 aaPredicted RBP5.92□□□□□ -1.46
CCDC30-203ENST00000428554 GTPBP6O43824 516 aaPredicted RBP5.91□□□□□ -1.46
CCDC30-203ENST00000428554 CD44P16070 742 aaKnown RBP5.9□□□□□ -1.46
CCDC30-203ENST00000428554 BCL11BQ9C0K0 894 aaPredicted RBP5.9□□□□□ -1.46
CCDC30-203ENST00000428554 PAK3O75914 559 aaPredicted RBP5.9□□□□□ -1.46
CCDC30-203ENST00000428554 STK24Q9Y6E0 443 aa5.9□□□□□ -1.47
CCDC30-203ENST00000428554 EIF5BO60841 1220 aaKnown RBP5.88□□□□□ -1.47
CCDC30-203ENST00000428554 SGIP1Q9BQI5 828 aa5.88□□□□□ -1.47
CCDC30-203ENST00000428554 HRCP23327 699 aa5.88□□□□□ -1.47
CCDC30-203ENST00000428554 PCDHB8Q9UN66 801 aa5.86□□□□□ -1.47
CCDC30-203ENST00000428554 PCDHB13Q9Y5F0 798 aa5.86□□□□□ -1.47
CCDC30-203ENST00000428554 ZRANB1Q9UGI0 708 aa5.86□□□□□ -1.47
CCDC30-203ENST00000428554 CCDC61Q9Y6R9 512 aa5.86□□□□□ -1.47
CCDC30-203ENST00000428554 CLCN6P51797 869 aa5.85□□□□□ -1.47
CCDC30-203ENST00000428554 EVX2Q03828 476 aa5.85□□□□□ -1.47
CCDC30-203ENST00000428554 NBR1Q14596 966 aa5.85□□□□□ -1.47
CCDC30-203ENST00000428554 ILDR1Q86SU0 546 aaPredicted RBP5.84□□□□□ -1.47
CCDC30-203ENST00000428554 UBTFP17480 764 aaKnown RBP5.83□□□□□ -1.48
CCDC30-203ENST00000428554 ZNF579Q8NAF0 562 aaKnown RBP5.83□□□□□ -1.48
CCDC30-203ENST00000428554 SUPT5HO00267 1087 aaKnown RBP5.83□□□□□ -1.48
CCDC30-203ENST00000428554 ZNF467Q7Z7K2 595 aaPredicted RBP5.82□□□□□ -1.48
CCDC30-203ENST00000428554 PDAP1Q13442 181 aaKnown RBP5.81□□□□□ -1.48
CCDC30-203ENST00000428554 IFNL1Q8IU54 200 aa5.8□□□□□ -1.48
CCDC30-203ENST00000428554 MAP3K13O43283 966 aa5.79□□□□□ -1.48
CCDC30-203ENST00000428554 PSEN1P49768 467 aa5.79□□□□□ -1.48
CCDC30-203ENST00000428554 PHF12Q96QT6 1004 aa5.78□□□□□ -1.48
CCDC30-203ENST00000428554 KIF12Q96FN5 646 aa5.78□□□□□ -1.48
CCDC30-203ENST00000428554 CADPS2Q86UW7 1296 aa5.78□□□□□ -1.48
CCDC30-203ENST00000428554 MFRPQ9BY79 579 aa5.77□□□□□ -1.49
CCDC30-203ENST00000428554 GABBR2O75899 941 aa5.76□□□□□ -1.49
CCDC30-203ENST00000428554 RYDENQ9NUL5 291 aaKnown RBP5.76□□□□□ -1.49
CCDC30-203ENST00000428554 LOC105371045A0A1W2PR82 267 aa5.75□□□□□ -1.49
CCDC30-203ENST00000428554 PPP1R37O75864 691 aa5.74□□□□□ -1.49
CCDC30-203ENST00000428554 EFCAB3Q8N7B9 438 aa5.74□□□□□ -1.49
CCDC30-203ENST00000428554 CABP2Q9NPB3 220 aa5.73□□□□□ -1.49
CCDC30-203ENST00000428554 MS4A3Q96HJ5 214 aa5.72□□□□□ -1.49
CCDC30-203ENST00000428554 SHROOM4Q9ULL8 1493 aa5.72□□□□□ -1.49
CCDC30-203ENST00000428554 GALR2O43603 387 aaPredicted RBP5.72□□□□□ -1.49
CCDC30-203ENST00000428554 FBXO22Q8NEZ5 403 aa5.72□□□□□ -1.49
CCDC30-203ENST00000428554 PHF8Q9UPP1 1060 aa5.72□□□□□ -1.49
CCDC30-203ENST00000428554 CCDC9Q9Y3X0 531 aaKnown RBP5.72□□□□□ -1.49
CCDC30-203ENST00000428554 TRPC6Q9Y210 931 aa5.71□□□□□ -1.49
CCDC30-203ENST00000428554 KCNV2Q8TDN2 545 aa5.68□□□□□ -1.5
CCDC30-203ENST00000428554 DCBLD2Q96PD2 775 aa5.68□□□□□ -1.5
CCDC30-203ENST00000428554 HMGB1P09429 215 aaKnown RBP5.68□□□□□ -1.5
CCDC30-203ENST00000428554 NLRP6P59044 892 aa5.68□□□□□ -1.5
CCDC30-203ENST00000428554 MS4A4AQ96JQ5 239 aa5.68□□□□□ -1.5
CCDC30-203ENST00000428554 SOX12O15370 315 aa5.67□□□□□ -1.5
CCDC30-203ENST00000428554 TMEM106CQ9BVX2 250 aa5.66□□□□□ -1.5
CCDC30-203ENST00000428554 TIE1P35590 1138 aa5.66□□□□□ -1.5
CCDC30-203ENST00000428554 LHX8Q68G74 356 aa5.66□□□□□ -1.5
CCDC30-203ENST00000428554 WDR70Q9NW82 654 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms