RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 RNF25Q96BH1 459 aaPredicted RBP9.4□□□□□ -0.9
NUDCD1-202ENST00000427660 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
NUDCD1-202ENST00000427660 NUBP1P53384 320 aa9.35□□□□□ -0.91
NUDCD1-202ENST00000427660 NKX1-1Q15270 411 aaPredicted RBP9.35□□□□□ -0.91
NUDCD1-202ENST00000427660 GTPBP6O43824 516 aaPredicted RBP9.34□□□□□ -0.91
NUDCD1-202ENST00000427660 VGFO15240 615 aaPredicted RBP9.3□□□□□ -0.92
NUDCD1-202ENST00000427660 RYDENQ9NUL5 291 aaKnown RBP9.3□□□□□ -0.92
NUDCD1-202ENST00000427660 DCAF8Q5TAQ9 597 aa9.29□□□□□ -0.92
NUDCD1-202ENST00000427660 STK25O00506 426 aa9.28□□□□□ -0.92
NUDCD1-202ENST00000427660 SGIP1Q9BQI5 828 aa9.28□□□□□ -0.92
NUDCD1-202ENST00000427660 CHRM1P11229 460 aaPredicted RBP9.27□□□□□ -0.93
NUDCD1-202ENST00000427660 ERICH6Q7L0X2 663 aa9.27□□□□□ -0.93
NUDCD1-202ENST00000427660 FAM212AQ96EL1 285 aa9.27□□□□□ -0.93
NUDCD1-202ENST00000427660 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
NUDCD1-202ENST00000427660 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
NUDCD1-202ENST00000427660 SPDYE1Q8NFV5 336 aaPredicted RBP9.22□□□□□ -0.93
NUDCD1-202ENST00000427660 P3H3Q8IVL6 736 aa9.21□□□□□ -0.93
NUDCD1-202ENST00000427660 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
NUDCD1-202ENST00000427660 TMEM132AQ24JP5 1023 aa9.19□□□□□ -0.94
NUDCD1-202ENST00000427660 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
NUDCD1-202ENST00000427660 MNX1P50219 401 aaPredicted RBP9.17□□□□□ -0.94
NUDCD1-202ENST00000427660 STK24Q9Y6E0 443 aa9.17□□□□□ -0.94
NUDCD1-202ENST00000427660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.17□□□□□ -0.94
NUDCD1-202ENST00000427660 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
NUDCD1-202ENST00000427660 CREBZFQ9NS37 354 aa9.17□□□□□ -0.94
NUDCD1-202ENST00000427660 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
NUDCD1-202ENST00000427660 AKT1S1Q96B36 256 aa9.13□□□□□ -0.95
NUDCD1-202ENST00000427660 RASEFQ8IZ41 740 aa9.12□□□□□ -0.95
NUDCD1-202ENST00000427660 RBM42Q9BTD8 480 aaKnown RBP9.11□□□□□ -0.95
NUDCD1-202ENST00000427660 ARXQ96QS3 562 aa9.08□□□□□ -0.96
NUDCD1-202ENST00000427660 WDR70Q9NW82 654 aa9.08□□□□□ -0.96
NUDCD1-202ENST00000427660 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
NUDCD1-202ENST00000427660 PYGBP11216 843 aa9.07□□□□□ -0.96
NUDCD1-202ENST00000427660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.05□□□□□ -0.96
NUDCD1-202ENST00000427660 LMOD2Q6P5Q4 547 aa9.04□□□□□ -0.96
NUDCD1-202ENST00000427660 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
NUDCD1-202ENST00000427660 ZNF467Q7Z7K2 595 aaPredicted RBP9.03□□□□□ -0.96
NUDCD1-202ENST00000427660 REM2Q8IYK8 340 aaPredicted RBP9□□□□□ -0.97
NUDCD1-202ENST00000427660 CADPS2Q86UW7 1296 aa9□□□□□ -0.97
NUDCD1-202ENST00000427660 PDAP1Q13442 181 aaKnown RBP8.98□□□□□ -0.97
NUDCD1-202ENST00000427660 ARHGEF1Q92888 912 aaKnown RBP8.96□□□□□ -0.97
NUDCD1-202ENST00000427660 C14orf37Q86TY3 774 aa8.96□□□□□ -0.98
NUDCD1-202ENST00000427660 BRPF1P55201 1214 aaPredicted RBP8.93□□□□□ -0.98
NUDCD1-202ENST00000427660 MFRPQ9BY79 579 aa8.92□□□□□ -0.98
NUDCD1-202ENST00000427660 E2F4Q16254 413 aa8.89□□□□□ -0.99
NUDCD1-202ENST00000427660 ZC3H15Q8WU90 426 aaKnown RBP8.89□□□□□ -0.99
NUDCD1-202ENST00000427660 ZNF579Q8NAF0 562 aaKnown RBP8.89□□□□□ -0.99
NUDCD1-202ENST00000427660 PITPNM1O00562 1244 aa8.88□□□□□ -0.99
NUDCD1-202ENST00000427660 PSEN1P49768 467 aa8.88□□□□□ -0.99
NUDCD1-202ENST00000427660 DAXXQ9UER7 740 aaPredicted RBP8.88□□□□□ -0.99
NUDCD1-202ENST00000427660 HOMEZQ8IX15 550 aa8.87□□□□□ -0.99
NUDCD1-202ENST00000427660 TSPYL2Q9H2G4 693 aaPredicted RBP8.87□□□□□ -0.99
NUDCD1-202ENST00000427660 TESPA1A2RU30 521 aaPredicted RBP8.87□□□□□ -0.99
NUDCD1-202ENST00000427660 PCDHB8Q9UN66 801 aa8.86□□□□□ -0.99
NUDCD1-202ENST00000427660 PCDHB13Q9Y5F0 798 aa8.86□□□□□ -0.99
NUDCD1-202ENST00000427660 NLRP6P59044 892 aa8.84□□□□□ -0.99
NUDCD1-202ENST00000427660 NEUROD2Q15784 382 aa8.84□□□□□ -0.99
NUDCD1-202ENST00000427660 SOX12O15370 315 aa8.83□□□□□ -1
NUDCD1-202ENST00000427660 CCDC61Q9Y6R9 512 aa8.83□□□□□ -1
NUDCD1-202ENST00000427660 FBXO22Q8NEZ5 403 aa8.82□□□□□ -1
NUDCD1-202ENST00000427660 SEMA3EO15041 775 aa8.82□□□□□ -1
NUDCD1-202ENST00000427660 SMYD5Q6GMV2 418 aa8.82□□□□□ -1
NUDCD1-202ENST00000427660 PPP1R37O75864 691 aa8.81□□□□□ -1
NUDCD1-202ENST00000427660 FARP1Q9Y4F1 1045 aaPredicted RBP8.81□□□□□ -1
NUDCD1-202ENST00000427660 SLC24A3Q9HC58 644 aa8.81□□□□□ -1
NUDCD1-202ENST00000427660 ZMYND10O75800 440 aa8.79□□□□□ -1
NUDCD1-202ENST00000427660 ARIH1Q9Y4X5 557 aaPredicted RBP8.79□□□□□ -1
NUDCD1-202ENST00000427660 EFCAB3Q8N7B9 438 aa8.77□□□□□ -1
NUDCD1-202ENST00000427660 CHADLQ6NUI6 762 aa8.77□□□□□ -1.01
NUDCD1-202ENST00000427660 CHRDL2Q6WN34 429 aa8.76□□□□□ -1.01
NUDCD1-202ENST00000427660 PDE4AP27815 886 aa8.76□□□□□ -1.01
NUDCD1-202ENST00000427660 MFSD10Q14728 455 aa8.75□□□□□ -1.01
NUDCD1-202ENST00000427660 PHF8Q9UPP1 1060 aa8.75□□□□□ -1.01
NUDCD1-202ENST00000427660 NCKAP5LQ9HCH0 1330 aa8.74□□□□□ -1.01
NUDCD1-202ENST00000427660 CABP2Q9NPB3 220 aa8.74□□□□□ -1.01
NUDCD1-202ENST00000427660 IFNL1Q8IU54 200 aa8.74□□□□□ -1.01
NUDCD1-202ENST00000427660 PAK3O75914 559 aaPredicted RBP8.73□□□□□ -1.01
NUDCD1-202ENST00000427660 BARGINQ6ZT62 677 aa8.73□□□□□ -1.01
NUDCD1-202ENST00000427660 LARP6Q9BRS8 491 aaKnown RBP8.73□□□□□ -1.01
NUDCD1-202ENST00000427660 CRISPLD2Q9H0B8 497 aa8.71□□□□□ -1.02
NUDCD1-202ENST00000427660 CAMK2BQ13554 666 aa8.69□□□□□ -1.02
NUDCD1-202ENST00000427660 DDX27Q96GQ7 796 aaKnown RBP8.69□□□□□ -1.02
NUDCD1-202ENST00000427660 KIF12Q96FN5 646 aa8.69□□□□□ -1.02
NUDCD1-202ENST00000427660 MAP3K13O43283 966 aa8.68□□□□□ -1.02
NUDCD1-202ENST00000427660 POTEHQ6S545 545 aa8.68□□□□□ -1.02
NUDCD1-202ENST00000427660 AK7Q96M32 723 aa8.68□□□□□ -1.02
NUDCD1-202ENST00000427660 PRKAR2AP13861 404 aaKnown RBP8.66□□□□□ -1.02
NUDCD1-202ENST00000427660 MS4A4AQ96JQ5 239 aa8.65□□□□□ -1.02
NUDCD1-202ENST00000427660 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.03
NUDCD1-202ENST00000427660 GPIHBP1Q8IV16 184 aa8.63□□□□□ -1.03
NUDCD1-202ENST00000427660 FXR2P51116 673 aaKnown RBP eCLIP8.61□□□□□ -1.03
NUDCD1-202ENST00000427660 PIP4P2Q8N4L2 257 aa8.6□□□□□ -1.03
NUDCD1-202ENST00000427660 KRI1Q8N9T8 703 aaKnown RBP8.6□□□□□ -1.03
NUDCD1-202ENST00000427660 GOLGA2Q08379 1002 aa8.59□□□□□ -1.03
NUDCD1-202ENST00000427660 RBM26Q5T8P6 1007 aaKnown RBP8.59□□□□□ -1.03
NUDCD1-202ENST00000427660 GPBP1L1Q9HC44 474 aaPredicted RBP8.58□□□□□ -1.04
NUDCD1-202ENST00000427660 MLLT3P42568 568 aaPredicted RBP8.57□□□□□ -1.04
NUDCD1-202ENST00000427660 KDM4CQ9H3R0 1056 aa8.57□□□□□ -1.04
NUDCD1-202ENST00000427660 SPDYE16A6NNV3 312 aaPredicted RBP8.55□□□□□ -1.04
NUDCD1-202ENST00000427660 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms