RNA–Protein interactions for RNA: ENST00000427238.1

SPRED2-204, Transcript of sprouty related EVH1 domain containing 2, humanhuman

TSL 3

Gene SPRED2, Length 467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED2-204ENST00000427238 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
SPRED2-204ENST00000427238 PELP1Q8IZL8 1130 aaKnown RBP11.7□□□□□ -0.54
SPRED2-204ENST00000427238 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
SPRED2-204ENST00000427238 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
SPRED2-204ENST00000427238 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
SPRED2-204ENST00000427238 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
SPRED2-204ENST00000427238 POTEB2H3BUK9 544 aa11.63□□□□□ -0.55
SPRED2-204ENST00000427238 MAP3K13O43283 966 aa11.62□□□□□ -0.55
SPRED2-204ENST00000427238 SLC39A7Q92504 469 aa11.62□□□□□ -0.55
SPRED2-204ENST00000427238 METRNQ9UJH8 293 aa11.62□□□□□ -0.55
SPRED2-204ENST00000427238 C7P10643 843 aa11.61□□□□□ -0.55
SPRED2-204ENST00000427238 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
SPRED2-204ENST00000427238 ATN1P54259 1190 aaPredicted RBP11.58□□□□□ -0.56
SPRED2-204ENST00000427238 NUBP1P53384 320 aa11.57□□□□□ -0.56
SPRED2-204ENST00000427238 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
SPRED2-204ENST00000427238 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
SPRED2-204ENST00000427238 TRPC6Q9Y210 931 aa11.56□□□□□ -0.56
SPRED2-204ENST00000427238 FAM212AQ96EL1 285 aa11.54□□□□□ -0.56
SPRED2-204ENST00000427238 TIE1P35590 1138 aa11.53□□□□□ -0.56
SPRED2-204ENST00000427238 PCDHB13Q9Y5F0 798 aa11.52□□□□□ -0.57
SPRED2-204ENST00000427238 SGIP1Q9BQI5 828 aa11.5□□□□□ -0.57
SPRED2-204ENST00000427238 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
SPRED2-204ENST00000427238 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
SPRED2-204ENST00000427238 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
SPRED2-204ENST00000427238 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
SPRED2-204ENST00000427238 SEC24BO95487 1268 aa11.43□□□□□ -0.58
SPRED2-204ENST00000427238 IFNL1Q8IU54 200 aa11.43□□□□□ -0.58
SPRED2-204ENST00000427238 KLHL34Q8N239 644 aa11.42□□□□□ -0.58
SPRED2-204ENST00000427238 SCUBE2Q9NQ36 999 aa11.41□□□□□ -0.58
SPRED2-204ENST00000427238 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
SPRED2-204ENST00000427238 POTEFA5A3E0 1075 aa11.4□□□□□ -0.58
SPRED2-204ENST00000427238 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
SPRED2-204ENST00000427238 PYGBP11216 843 aa11.38□□□□□ -0.59
SPRED2-204ENST00000427238 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
SPRED2-204ENST00000427238 COLQQ9Y215 455 aaPredicted RBP11.37□□□□□ -0.59
SPRED2-204ENST00000427238 IER5LQ5T953 404 aa11.35□□□□□ -0.59
SPRED2-204ENST00000427238 POTEMA6NI47 508 aa11.31□□□□□ -0.6
SPRED2-204ENST00000427238 GSE1Q14687 1217 aa11.3□□□□□ -0.6
SPRED2-204ENST00000427238 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
SPRED2-204ENST00000427238 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
SPRED2-204ENST00000427238 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
SPRED2-204ENST00000427238 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
SPRED2-204ENST00000427238 PLCG2P16885 1265 aa11.27□□□□□ -0.61
SPRED2-204ENST00000427238 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
SPRED2-204ENST00000427238 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
SPRED2-204ENST00000427238 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
SPRED2-204ENST00000427238 IFNLR1Q8IU57 520 aaPredicted RBP11.18□□□□□ -0.62
SPRED2-204ENST00000427238 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
SPRED2-204ENST00000427238 CHRM1P11229 460 aaPredicted RBP11.17□□□□□ -0.62
SPRED2-204ENST00000427238 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
SPRED2-204ENST00000427238 LCE2DQ5TA82 110 aaPredicted RBP11.16□□□□□ -0.62
SPRED2-204ENST00000427238 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
SPRED2-204ENST00000427238 GOLGA2Q08379 1002 aa11.15□□□□□ -0.62
SPRED2-204ENST00000427238 PCDH10Q9P2E7 1040 aa11.13□□□□□ -0.63
SPRED2-204ENST00000427238 MKRN3Q13064 507 aaKnown RBP11.12□□□□□ -0.63
SPRED2-204ENST00000427238 PSEN1P49768 467 aa11.11□□□□□ -0.63
SPRED2-204ENST00000427238 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.07□□□□□ -0.64
SPRED2-204ENST00000427238 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
SPRED2-204ENST00000427238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.05□□□□□ -0.649e-8■□□□□ 10.4
SPRED2-204ENST00000427238 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
SPRED2-204ENST00000427238 L3MBTL3Q96JM7 780 aaPredicted RBP11.02□□□□□ -0.65
SPRED2-204ENST00000427238 ST18O60284 1047 aa11.01□□□□□ -0.65
SPRED2-204ENST00000427238 C3orf67Q6ZVT6 689 aa11□□□□□ -0.65
SPRED2-204ENST00000427238 CABP2Q9NPB3 220 aa10.99□□□□□ -0.65
SPRED2-204ENST00000427238 SNPHO15079 494 aa10.98□□□□□ -0.65
SPRED2-204ENST00000427238 TRIM41Q8WV44 630 aa10.96□□□□□ -0.65
SPRED2-204ENST00000427238 CDAN1Q8IWY9 1227 aa10.95□□□□□ -0.66
SPRED2-204ENST00000427238 G3V3G9 751 aa10.91□□□□□ -0.66
SPRED2-204ENST00000427238 DPY19L2Q6NUT2 758 aa10.91□□□□□ -0.66
SPRED2-204ENST00000427238 ILDR1Q86SU0 546 aaPredicted RBP10.91□□□□□ -0.66
SPRED2-204ENST00000427238 TMEM121BQ9BXQ6 578 aaPredicted RBP10.91□□□□□ -0.66
SPRED2-204ENST00000427238 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
SPRED2-204ENST00000427238 EFCAB3Q8N7B9 438 aa10.85□□□□□ -0.67
SPRED2-204ENST00000427238 MARVELD3Q96A59 401 aa10.85□□□□□ -0.67
SPRED2-204ENST00000427238 RIOK3O14730 519 aaKnown RBP10.82□□□□□ -0.68
SPRED2-204ENST00000427238 EMP3P54852 163 aa10.78□□□□□ -0.68
SPRED2-204ENST00000427238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.77□□□□□ -0.69
SPRED2-204ENST00000427238 VGFO15240 615 aaPredicted RBP10.77□□□□□ -0.69
SPRED2-204ENST00000427238 RNF25Q96BH1 459 aaPredicted RBP10.77□□□□□ -0.69
SPRED2-204ENST00000427238 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
SPRED2-204ENST00000427238 SOX12O15370 315 aa10.74□□□□□ -0.69
SPRED2-204ENST00000427238 FAM205CA6NFA0 338 aa10.71□□□□□ -0.69
SPRED2-204ENST00000427238 ZNF710Q8N1W2 664 aa10.71□□□□□ -0.69
SPRED2-204ENST00000427238 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
SPRED2-204ENST00000427238 HS3ST6Q96QI5 342 aa10.69□□□□□ -0.7
SPRED2-204ENST00000427238 TAOK2Q9UL54 1235 aa10.69□□□□□ -0.7
SPRED2-204ENST00000427238 PHF8Q9UPP1 1060 aa10.69□□□□□ -0.7
SPRED2-204ENST00000427238 MICALL2Q8IY33 904 aa10.68□□□□□ -0.7
SPRED2-204ENST00000427238 DOK7Q18PE1 504 aa10.67□□□□□ -0.7
SPRED2-204ENST00000427238 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
SPRED2-204ENST00000427238 MS4A4AQ96JQ5 239 aa10.65□□□□□ -0.7
SPRED2-204ENST00000427238 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.7
SPRED2-204ENST00000427238 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
SPRED2-204ENST00000427238 RIMBP2O15034 1052 aa10.64□□□□□ -0.71
SPRED2-204ENST00000427238 MMRN1Q13201 1228 aa10.64□□□□□ -0.71
SPRED2-204ENST00000427238 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
SPRED2-204ENST00000427238 STK24Q9Y6E0 443 aa10.64□□□□□ -0.71
SPRED2-204ENST00000427238 ECM2O94769 699 aaPredicted RBP10.63□□□□□ -0.71
SPRED2-204ENST00000427238 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
SPRED2-204ENST00000427238 NLRP6P59044 892 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms