RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 CIZ1Q9ULV3 898 aaPredicted RBP10.08□□□□□ -0.8
LINC00240-202ENST00000424968 P3H3Q8IVL6 736 aa10.06□□□□□ -0.8
LINC00240-202ENST00000424968 RYDENQ9NUL5 291 aaKnown RBP10.04□□□□□ -0.8
LINC00240-202ENST00000424968 PODXL2Q9NZ53 605 aa10.03□□□□□ -0.8
LINC00240-202ENST00000424968 MIER1Q8N108 512 aa10.02□□□□□ -0.81
LINC00240-202ENST00000424968 SUPT5HO00267 1087 aaKnown RBP9.91□□□□□ -0.82
LINC00240-202ENST00000424968 GSE1Q14687 1217 aa9.91□□□□□ -0.82
LINC00240-202ENST00000424968 GTPBP6O43824 516 aaPredicted RBP9.87□□□□□ -0.83
LINC00240-202ENST00000424968 LMOD2Q6P5Q4 547 aa9.87□□□□□ -0.83
LINC00240-202ENST00000424968 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
LINC00240-202ENST00000424968 WDR70Q9NW82 654 aa9.87□□□□□ -0.83
LINC00240-202ENST00000424968 BRPF1P55201 1214 aaPredicted RBP9.84□□□□□ -0.83
LINC00240-202ENST00000424968 RBM42Q9BTD8 480 aaKnown RBP9.84□□□□□ -0.83
LINC00240-202ENST00000424968 RIOK3O14730 519 aaKnown RBP9.83□□□□□ -0.84
LINC00240-202ENST00000424968 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC00240-202ENST00000424968 NEUROD2Q15784 382 aa9.82□□□□□ -0.84
LINC00240-202ENST00000424968 OSCARQ8IYS5 282 aa9.82□□□□□ -0.84
LINC00240-202ENST00000424968 NPM2Q86SE8 214 aaKnown RBP9.79□□□□□ -0.84
LINC00240-202ENST00000424968 SPDYE2BA6NHP3 402 aa9.78□□□□□ -0.84
LINC00240-202ENST00000424968 STK25O00506 426 aa9.78□□□□□ -0.84
LINC00240-202ENST00000424968 VGFO15240 615 aaPredicted RBP9.78□□□□□ -0.84
LINC00240-202ENST00000424968 SPDYE6P0CI01 402 aa9.78□□□□□ -0.84
LINC00240-202ENST00000424968 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
LINC00240-202ENST00000424968 SPDYE2Q495Y8 402 aa9.78□□□□□ -0.84
LINC00240-202ENST00000424968 RSPH6AQ9H0K4 717 aa9.72□□□□□ -0.85
LINC00240-202ENST00000424968 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00240-202ENST00000424968 RNF25Q96BH1 459 aaPredicted RBP9.7□□□□□ -0.86
LINC00240-202ENST00000424968 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
LINC00240-202ENST00000424968 ZMYND15Q9H091 742 aa9.69□□□□□ -0.86
LINC00240-202ENST00000424968 SGIP1Q9BQI5 828 aa9.68□□□□□ -0.86
LINC00240-202ENST00000424968 UBTFP17480 764 aaKnown RBP9.67□□□□□ -0.86
LINC00240-202ENST00000424968 ZC3H15Q8WU90 426 aaKnown RBP9.67□□□□□ -0.86
LINC00240-202ENST00000424968 TRIM26Q12899 539 aaPredicted RBP9.66□□□□□ -0.86
LINC00240-202ENST00000424968 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
LINC00240-202ENST00000424968 KCNV2Q8TDN2 545 aa9.65□□□□□ -0.86
LINC00240-202ENST00000424968 AKT1S1Q96B36 256 aa9.65□□□□□ -0.86
LINC00240-202ENST00000424968 SMYD5Q6GMV2 418 aa9.64□□□□□ -0.87
LINC00240-202ENST00000424968 STK24Q9Y6E0 443 aa9.64□□□□□ -0.87
LINC00240-202ENST00000424968 ARHGEF1Q92888 912 aaKnown RBP9.63□□□□□ -0.87
LINC00240-202ENST00000424968 ZBTB7CA1YPR0 619 aa9.62□□□□□ -0.87
LINC00240-202ENST00000424968 FAM212AQ96EL1 285 aa9.62□□□□□ -0.87
LINC00240-202ENST00000424968 CHRM1P11229 460 aaPredicted RBP9.61□□□□□ -0.87
LINC00240-202ENST00000424968 BCL11BQ9C0K0 894 aaPredicted RBP9.61□□□□□ -0.87
LINC00240-202ENST00000424968 CCDC9Q9Y3X0 531 aaKnown RBP9.61□□□□□ -0.87
LINC00240-202ENST00000424968 SLC24A3Q9HC58 644 aa9.6□□□□□ -0.87
LINC00240-202ENST00000424968 REM2Q8IYK8 340 aaPredicted RBP9.55□□□□□ -0.88
LINC00240-202ENST00000424968 NUBP1P53384 320 aa9.54□□□□□ -0.88
LINC00240-202ENST00000424968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.53□□□□□ -0.88
LINC00240-202ENST00000424968 PDIA4P13667 645 aaKnown RBP9.53□□□□□ -0.88
LINC00240-202ENST00000424968 ZFP91Q96JP5 570 aaPredicted RBP9.53□□□□□ -0.88
LINC00240-202ENST00000424968 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
LINC00240-202ENST00000424968 ZMYND10O75800 440 aa9.51□□□□□ -0.89
LINC00240-202ENST00000424968 HRCP23327 699 aa9.51□□□□□ -0.89
LINC00240-202ENST00000424968 AK7Q96M32 723 aa9.5□□□□□ -0.89
LINC00240-202ENST00000424968 E2F4Q16254 413 aa9.49□□□□□ -0.89
LINC00240-202ENST00000424968 SPDYE1Q8NFV5 336 aaPredicted RBP9.49□□□□□ -0.89
LINC00240-202ENST00000424968 CLEC11AQ9Y240 323 aa9.49□□□□□ -0.89
LINC00240-202ENST00000424968 ARID3AQ99856 593 aa9.47□□□□□ -0.89
LINC00240-202ENST00000424968 BARGINQ6ZT62 677 aa9.45□□□□□ -0.9
LINC00240-202ENST00000424968 PITPNM1O00562 1244 aa9.44□□□□□ -0.9
LINC00240-202ENST00000424968 CHRDL2Q6WN34 429 aa9.44□□□□□ -0.9
LINC00240-202ENST00000424968 FLIIQ13045 1269 aa9.43□□□□□ -0.9
LINC00240-202ENST00000424968 KRI1Q8N9T8 703 aaKnown RBP9.42□□□□□ -0.9
LINC00240-202ENST00000424968 SEMA3EO15041 775 aa9.41□□□□□ -0.9
LINC00240-202ENST00000424968 CADPS2Q86UW7 1296 aa9.41□□□□□ -0.9
LINC00240-202ENST00000424968 IL27Q8NEV9 243 aa9.41□□□□□ -0.9
LINC00240-202ENST00000424968 APBB1O00213 710 aa9.38□□□□□ -0.91
LINC00240-202ENST00000424968 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
LINC00240-202ENST00000424968 ZNF467Q7Z7K2 595 aaPredicted RBP9.36□□□□□ -0.91
LINC00240-202ENST00000424968 KDM4CQ9H3R0 1056 aa9.36□□□□□ -0.91
LINC00240-202ENST00000424968 KCTD17Q8N5Z5 321 aa9.32□□□□□ -0.92
LINC00240-202ENST00000424968 GPBP1L1Q9HC44 474 aaPredicted RBP9.32□□□□□ -0.92
LINC00240-202ENST00000424968 GPIHBP1Q8IV16 184 aa9.31□□□□□ -0.92
LINC00240-202ENST00000424968 PYGBP11216 843 aa9.3□□□□□ -0.92
LINC00240-202ENST00000424968 PDAP1Q13442 181 aaKnown RBP9.3□□□□□ -0.92
LINC00240-202ENST00000424968 DDRGK1Q96HY6 314 aa9.3□□□□□ -0.92
LINC00240-202ENST00000424968 ARIH1Q9Y4X5 557 aaPredicted RBP9.3□□□□□ -0.92
LINC00240-202ENST00000424968 PDE4DQ08499 809 aa9.27□□□□□ -0.93
LINC00240-202ENST00000424968 PIP4P2Q8N4L2 257 aa9.27□□□□□ -0.93
LINC00240-202ENST00000424968 C1orf115Q9H7X2 142 aa9.27□□□□□ -0.93
LINC00240-202ENST00000424968 PDE4AP27815 886 aa9.26□□□□□ -0.93
LINC00240-202ENST00000424968 POTEHQ6S545 545 aa9.26□□□□□ -0.93
LINC00240-202ENST00000424968 A6NJR5 290 aa9.25□□□□□ -0.93
LINC00240-202ENST00000424968 ZNF316A6NFI3 1004 aaPredicted RBP9.24□□□□□ -0.93
LINC00240-202ENST00000424968 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
LINC00240-202ENST00000424968 TRIM66O15016 1216 aa9.24□□□□□ -0.93
LINC00240-202ENST00000424968 PRKAR2AP13861 404 aaKnown RBP9.24□□□□□ -0.93
LINC00240-202ENST00000424968 FXR2P51116 673 aaKnown RBP eCLIP9.24□□□□□ -0.93
LINC00240-202ENST00000424968 NLRP6P59044 892 aa9.24□□□□□ -0.93
LINC00240-202ENST00000424968 MKRN3Q13064 507 aaKnown RBP9.24□□□□□ -0.93
LINC00240-202ENST00000424968 RASEFQ8IZ41 740 aa9.24□□□□□ -0.93
LINC00240-202ENST00000424968 TRAIPQ9BWF2 469 aa9.21□□□□□ -0.94
LINC00240-202ENST00000424968 CHADLQ6NUI6 762 aa9.2□□□□□ -0.94
LINC00240-202ENST00000424968 MFRPQ9BY79 579 aa9.2□□□□□ -0.94
LINC00240-202ENST00000424968 GOPCQ9HD26 462 aa9.2□□□□□ -0.94
LINC00240-202ENST00000424968 CCDC82Q8N4S0 544 aa9.19□□□□□ -0.94
LINC00240-202ENST00000424968 LARP6Q9BRS8 491 aaKnown RBP9.19□□□□□ -0.94
LINC00240-202ENST00000424968 SOX12O15370 315 aa9.18□□□□□ -0.94
LINC00240-202ENST00000424968 TRAK2O60296 914 aa9.18□□□□□ -0.94
LINC00240-202ENST00000424968 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms