RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 PHF12Q96QT6 1004 aa7.85□□□□□ -1.15
PMS1-209ENST00000424059 POTEIP0CG38 1075 aa7.84□□□□□ -1.15
PMS1-209ENST00000424059 GALR2O43603 387 aaPredicted RBP7.83□□□□□ -1.16
PMS1-209ENST00000424059 CCDC61Q9Y6R9 512 aa7.8□□□□□ -1.16
PMS1-209ENST00000424059 TSPYL2Q9H2G4 693 aaPredicted RBP7.79□□□□□ -1.16
PMS1-209ENST00000424059 RASEFQ8IZ41 740 aa7.76□□□□□ -1.17
PMS1-209ENST00000424059 MS4A3Q96HJ5 214 aa7.76□□□□□ -1.17
PMS1-209ENST00000424059 NUBP1P53384 320 aa7.75□□□□□ -1.17
PMS1-209ENST00000424059 KIF12Q96FN5 646 aa7.75□□□□□ -1.17
PMS1-209ENST00000424059 SGIP1Q9BQI5 828 aa7.74□□□□□ -1.17
PMS1-209ENST00000424059 ASTLQ6HA08 431 aaPredicted RBP7.73□□□□□ -1.17
PMS1-209ENST00000424059 FAM212AQ96EL1 285 aa7.73□□□□□ -1.17
PMS1-209ENST00000424059 VASPP50552 380 aaPredicted RBP7.71□□□□□ -1.18
PMS1-209ENST00000424059 ATMINO43313 823 aaPredicted RBP7.7□□□□□ -1.18
PMS1-209ENST00000424059 SLC39A7Q92504 469 aa7.69□□□□□ -1.18
PMS1-209ENST00000424059 TIE1P35590 1138 aa7.69□□□□□ -1.18
PMS1-209ENST00000424059 MAP3K13O43283 966 aa7.68□□□□□ -1.18
PMS1-209ENST00000424059 C7P10643 843 aa7.68□□□□□ -1.18
PMS1-209ENST00000424059 PELP1Q8IZL8 1130 aaKnown RBP7.64□□□□□ -1.19
PMS1-209ENST00000424059 BMP2KQ9NSY1 1161 aaPredicted RBP7.64□□□□□ -1.19
PMS1-209ENST00000424059 METRNQ9UJH8 293 aa7.64□□□□□ -1.19
PMS1-209ENST00000424059 PCDHB13Q9Y5F0 798 aa7.64□□□□□ -1.19
PMS1-209ENST00000424059 GSE1Q14687 1217 aa7.63□□□□□ -1.19
PMS1-209ENST00000424059 KLHL34Q8N239 644 aa7.63□□□□□ -1.19
PMS1-209ENST00000424059 ATN1P54259 1190 aaPredicted RBP7.62□□□□□ -1.19
PMS1-209ENST00000424059 DCAF8Q5TAQ9 597 aa7.62□□□□□ -1.19
PMS1-209ENST00000424059 IER5LQ5T953 404 aa7.59□□□□□ -1.19
PMS1-209ENST00000424059 TTLL13PA6NNM8 815 aa7.59□□□□□ -1.19
PMS1-209ENST00000424059 MAMSTRQ6ZN01 415 aa7.59□□□□□ -1.19
PMS1-209ENST00000424059 TRPC6Q9Y210 931 aa7.58□□□□□ -1.2
PMS1-209ENST00000424059 IFNL1Q8IU54 200 aa7.57□□□□□ -1.2
PMS1-209ENST00000424059 CHRM1P11229 460 aaPredicted RBP7.57□□□□□ -1.2
PMS1-209ENST00000424059 SPOCK2Q92563 424 aa7.57□□□□□ -1.2
PMS1-209ENST00000424059 POTEB2H3BUK9 544 aa7.55□□□□□ -1.2
PMS1-209ENST00000424059 ZNF467Q7Z7K2 595 aaPredicted RBP7.54□□□□□ -1.2
PMS1-209ENST00000424059 OTUD5Q96G74 571 aa7.54□□□□□ -1.2
PMS1-209ENST00000424059 PYGBP11216 843 aa7.54□□□□□ -1.2
PMS1-209ENST00000424059 TMEM106CQ9BVX2 250 aa7.53□□□□□ -1.2
PMS1-209ENST00000424059 TRIM35Q9UPQ4 493 aa7.53□□□□□ -1.2
PMS1-209ENST00000424059 IFNLR1Q8IU57 520 aaPredicted RBP7.52□□□□□ -1.21
PMS1-209ENST00000424059 SCUBE2Q9NQ36 999 aa7.52□□□□□ -1.21
PMS1-209ENST00000424059 SEC24BO95487 1268 aa7.51□□□□□ -1.21
PMS1-209ENST00000424059 MMRN1Q13201 1228 aa7.51□□□□□ -1.21
PMS1-209ENST00000424059 TRIM41Q8WV44 630 aa7.51□□□□□ -1.21
PMS1-209ENST00000424059 POTEFA5A3E0 1075 aa7.49□□□□□ -1.21
PMS1-209ENST00000424059 CDAN1Q8IWY9 1227 aa7.48□□□□□ -1.21
PMS1-209ENST00000424059 POTEJP0CG39 1038 aa7.47□□□□□ -1.21
PMS1-209ENST00000424059 PCDHB8Q9UN66 801 aa7.47□□□□□ -1.21
PMS1-209ENST00000424059 PLCG2P16885 1265 aa7.46□□□□□ -1.22
PMS1-209ENST00000424059 COLQQ9Y215 455 aaPredicted RBP7.45□□□□□ -1.22
PMS1-209ENST00000424059 CIZ1Q9ULV3 898 aaPredicted RBP7.45□□□□□ -1.22
PMS1-209ENST00000424059 IRX5P78411 483 aaPredicted RBP7.44□□□□□ -1.22
PMS1-209ENST00000424059 OCEL1Q9H607 264 aa7.43□□□□□ -1.22
PMS1-209ENST00000424059 PSEN1P49768 467 aa7.42□□□□□ -1.22
PMS1-209ENST00000424059 PDAP1Q13442 181 aaKnown RBP7.42□□□□□ -1.22
PMS1-209ENST00000424059 GOLGA2Q08379 1002 aa7.4□□□□□ -1.22
PMS1-209ENST00000424059 MKRN3Q13064 507 aaKnown RBP7.39□□□□□ -1.23
PMS1-209ENST00000424059 L3MBTL3Q96JM7 780 aaPredicted RBP7.35□□□□□ -1.23
PMS1-209ENST00000424059 ILDR1Q86SU0 546 aaPredicted RBP7.34□□□□□ -1.24
PMS1-209ENST00000424059 PDCD7Q8N8D1 485 aaKnown RBP7.33□□□□□ -1.24
PMS1-209ENST00000424059 SLAIN1Q8ND83 568 aa7.32□□□□□ -1.24
PMS1-209ENST00000424059 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.32□□□□□ -1.245e-7■■■□□ 15.3
PMS1-209ENST00000424059 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.32□□□□□ -1.24
PMS1-209ENST00000424059 TAOK2Q9UL54 1235 aa7.31□□□□□ -1.24
PMS1-209ENST00000424059 RIOK3O14730 519 aaKnown RBP7.3□□□□□ -1.24
PMS1-209ENST00000424059 CABP2Q9NPB3 220 aa7.3□□□□□ -1.24
PMS1-209ENST00000424059 SNPHO15079 494 aa7.29□□□□□ -1.24
PMS1-209ENST00000424059 VGFO15240 615 aaPredicted RBP7.29□□□□□ -1.24
PMS1-209ENST00000424059 FAM163AQ96GL9 167 aaPredicted RBP7.28□□□□□ -1.24
PMS1-209ENST00000424059 C3orf67Q6ZVT6 689 aa7.28□□□□□ -1.24
PMS1-209ENST00000424059 LCE2DQ5TA82 110 aaPredicted RBP7.27□□□□□ -1.25
PMS1-209ENST00000424059 G3V3G9 751 aa7.25□□□□□ -1.25
PMS1-209ENST00000424059 SPNS2Q8IVW8 549 aa7.25□□□□□ -1.25
PMS1-209ENST00000424059 SOX12O15370 315 aa7.24□□□□□ -1.25
PMS1-209ENST00000424059 RNF25Q96BH1 459 aaPredicted RBP7.24□□□□□ -1.25
PMS1-209ENST00000424059 TMEM121BQ9BXQ6 578 aaPredicted RBP7.23□□□□□ -1.25
PMS1-209ENST00000424059 BOLA1Q9Y3E2 137 aa7.23□□□□□ -1.25
PMS1-209ENST00000424059 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.22□□□□□ -1.25
PMS1-209ENST00000424059 ZFP91Q96JP5 570 aaPredicted RBP7.22□□□□□ -1.25
PMS1-209ENST00000424059 EFCAB3Q8N7B9 438 aa7.22□□□□□ -1.25
PMS1-209ENST00000424059 ST18O60284 1047 aa7.19□□□□□ -1.26
PMS1-209ENST00000424059 ECM2O94769 699 aaPredicted RBP7.19□□□□□ -1.26
PMS1-209ENST00000424059 DPY19L2Q6NUT2 758 aa7.18□□□□□ -1.26
PMS1-209ENST00000424059 NLRP6P59044 892 aa7.15□□□□□ -1.26
PMS1-209ENST00000424059 PKD2Q13563 968 aa7.14□□□□□ -1.27
PMS1-209ENST00000424059 BCL11BQ9C0K0 894 aaPredicted RBP7.14□□□□□ -1.27
PMS1-209ENST00000424059 MICALL2Q8IY33 904 aa7.13□□□□□ -1.27
PMS1-209ENST00000424059 STK24Q9Y6E0 443 aa7.13□□□□□ -1.27
PMS1-209ENST00000424059 MS4A4AQ96JQ5 239 aa7.12□□□□□ -1.27
PMS1-209ENST00000424059 PHF8Q9UPP1 1060 aa7.12□□□□□ -1.27
PMS1-209ENST00000424059 STK25O00506 426 aa7.11□□□□□ -1.27
PMS1-209ENST00000424059 DOK7Q18PE1 504 aa7.11□□□□□ -1.27
PMS1-209ENST00000424059 FBXO22Q8NEZ5 403 aa7.1□□□□□ -1.27
PMS1-209ENST00000424059 RGL2O15211 777 aa7.09□□□□□ -1.27
PMS1-209ENST00000424059 RIMBP2O15034 1052 aa7.08□□□□□ -1.28
PMS1-209ENST00000424059 HOXB3P14651 431 aaPredicted RBP7.07□□□□□ -1.28
PMS1-209ENST00000424059 EMP3P54852 163 aa7.07□□□□□ -1.28
PMS1-209ENST00000424059 ZSWIM6Q9HCJ5 1215 aa7.07□□□□□ -1.28
PMS1-209ENST00000424059 MFRPQ9BY79 579 aa7.06□□□□□ -1.28
PMS1-209ENST00000424059 ZNF710Q8N1W2 664 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms