RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.48
TVP23C-202ENST00000419890 PROM2Q8N271 834 aa12.08□□□□□ -0.48
TVP23C-202ENST00000419890 ZCCHC6Q5VYS8 1495 aaKnown RBP12.06□□□□□ -0.48
TVP23C-202ENST00000419890 MYO15BQ96JP2 1530 aa12.04□□□□□ -0.48
TVP23C-202ENST00000419890 MS4A3Q96HJ5 214 aa12.01□□□□□ -0.49
TVP23C-202ENST00000419890 ASTLQ6HA08 431 aaPredicted RBP12□□□□□ -0.49
TVP23C-202ENST00000419890 DCAF1Q9Y4B6 1507 aa11.97□□□□□ -0.49
TVP23C-202ENST00000419890 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.49
TVP23C-202ENST00000419890 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
TVP23C-202ENST00000419890 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
TVP23C-202ENST00000419890 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
TVP23C-202ENST00000419890 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
TVP23C-202ENST00000419890 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
TVP23C-202ENST00000419890 UNC13AQ9UPW8 1703 aa11.9□□□□□ -0.5
TVP23C-202ENST00000419890 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
TVP23C-202ENST00000419890 C7P10643 843 aa11.88□□□□□ -0.51
TVP23C-202ENST00000419890 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
TVP23C-202ENST00000419890 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
TVP23C-202ENST00000419890 POTEMA6NI47 508 aa11.83□□□□□ -0.52
TVP23C-202ENST00000419890 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
TVP23C-202ENST00000419890 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
TVP23C-202ENST00000419890 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
TVP23C-202ENST00000419890 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
TVP23C-202ENST00000419890 POTEGQ6S5H5 508 aa11.79□□□□□ -0.52
TVP23C-202ENST00000419890 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
TVP23C-202ENST00000419890 BMP2KQ9NSY1 1161 aaPredicted RBP11.79□□□□□ -0.52
TVP23C-202ENST00000419890 MAP3K13O43283 966 aa11.77□□□□□ -0.53
TVP23C-202ENST00000419890 LCE2DQ5TA82 110 aaPredicted RBP11.75□□□□□ -0.53
TVP23C-202ENST00000419890 MIER1Q8N108 512 aa11.75□□□□□ -0.53
TVP23C-202ENST00000419890 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
TVP23C-202ENST00000419890 TIE1P35590 1138 aa11.72□□□□□ -0.53
TVP23C-202ENST00000419890 PLEKHG5O94827 1062 aa11.68□□□□□ -0.54
TVP23C-202ENST00000419890 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
TVP23C-202ENST00000419890 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
TVP23C-202ENST00000419890 COLQQ9Y215 455 aaPredicted RBP11.65□□□□□ -0.54
TVP23C-202ENST00000419890 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
TVP23C-202ENST00000419890 NUBP1P53384 320 aa11.63□□□□□ -0.55
TVP23C-202ENST00000419890 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
TVP23C-202ENST00000419890 HRCP23327 699 aa11.62□□□□□ -0.55
TVP23C-202ENST00000419890 PLCD3Q8N3E9 789 aa11.61□□□□□ -0.55
TVP23C-202ENST00000419890 SGIP1Q9BQI5 828 aa11.61□□□□□ -0.55
TVP23C-202ENST00000419890 FAM163AQ96GL9 167 aaPredicted RBP11.6□□□□□ -0.55
TVP23C-202ENST00000419890 PCDHB13Q9Y5F0 798 aa11.58□□□□□ -0.56
TVP23C-202ENST00000419890 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
TVP23C-202ENST00000419890 IER5LQ5T953 404 aa11.55□□□□□ -0.56
TVP23C-202ENST00000419890 IFNL1Q8IU54 200 aa11.55□□□□□ -0.56
TVP23C-202ENST00000419890 SEC24BO95487 1268 aa11.54□□□□□ -0.56
TVP23C-202ENST00000419890 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
TVP23C-202ENST00000419890 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
TVP23C-202ENST00000419890 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
TVP23C-202ENST00000419890 SUPT5HO00267 1087 aaKnown RBP11.48□□□□□ -0.57
TVP23C-202ENST00000419890 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
TVP23C-202ENST00000419890 TMEM106CQ9BVX2 250 aa11.46□□□□□ -0.57
TVP23C-202ENST00000419890 FKBP8Q14318 412 aa11.44□□□□□ -0.58
TVP23C-202ENST00000419890 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
TVP23C-202ENST00000419890 IRX5P78411 483 aaPredicted RBP11.43□□□□□ -0.58
TVP23C-202ENST00000419890 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
TVP23C-202ENST00000419890 ST18O60284 1047 aa11.37□□□□□ -0.59
TVP23C-202ENST00000419890 PLCG2P16885 1265 aa11.37□□□□□ -0.59
TVP23C-202ENST00000419890 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
TVP23C-202ENST00000419890 PYGBP11216 843 aa11.36□□□□□ -0.59
TVP23C-202ENST00000419890 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
TVP23C-202ENST00000419890 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
TVP23C-202ENST00000419890 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
TVP23C-202ENST00000419890 SMARCA4P51532 1647 aa11.27□□□□□ -0.61
TVP23C-202ENST00000419890 BAZ1AQ9NRL2 1556 aaPredicted RBP11.25□□□□□ -0.61
TVP23C-202ENST00000419890 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
TVP23C-202ENST00000419890 ATAD2BQ9ULI0 1458 aa11.24□□□□□ -0.61
TVP23C-202ENST00000419890 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
TVP23C-202ENST00000419890 PCGF6Q9BYE7 350 aa11.23□□□□□ -0.61
TVP23C-202ENST00000419890 NCAPD3P42695 1498 aa11.23□□□□□ -0.61
TVP23C-202ENST00000419890 SMARCA2P51531 1590 aa11.21□□□□□ -0.61
TVP23C-202ENST00000419890 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
TVP23C-202ENST00000419890 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
TVP23C-202ENST00000419890 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
TVP23C-202ENST00000419890 ZEB1P37275 1124 aaPredicted RBP11.19□□□□□ -0.62
TVP23C-202ENST00000419890 VASPP50552 380 aaPredicted RBP11.18□□□□□ -0.62
TVP23C-202ENST00000419890 CHRM1P11229 460 aaPredicted RBP11.17□□□□□ -0.62
TVP23C-202ENST00000419890 TRIM26Q12899 539 aaPredicted RBP11.17□□□□□ -0.62
TVP23C-202ENST00000419890 GSE1Q14687 1217 aa11.17□□□□□ -0.62
TVP23C-202ENST00000419890 ZNF467Q7Z7K2 595 aaPredicted RBP11.17□□□□□ -0.62
TVP23C-202ENST00000419890 SNPHO15079 494 aa11.16□□□□□ -0.62
TVP23C-202ENST00000419890 BAZ1BQ9UIG0 1483 aaKnown RBP11.15□□□□□ -0.62
TVP23C-202ENST00000419890 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
TVP23C-202ENST00000419890 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
TVP23C-202ENST00000419890 PEG3Q9GZU2 1588 aa11.12□□□□□ -0.63
TVP23C-202ENST00000419890 KLHL34Q8N239 644 aa11.12□□□□□ -0.63
TVP23C-202ENST00000419890 ILDR1Q86SU0 546 aaPredicted RBP11.11□□□□□ -0.63
TVP23C-202ENST00000419890 SPNS2Q8IVW8 549 aa11.11□□□□□ -0.63
TVP23C-202ENST00000419890 PSEN1P49768 467 aa11.1□□□□□ -0.63
TVP23C-202ENST00000419890 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
TVP23C-202ENST00000419890 MMRN1Q13201 1228 aa11.1□□□□□ -0.63
TVP23C-202ENST00000419890 WIZO95785 1651 aa11.09□□□□□ -0.63
TVP23C-202ENST00000419890 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
TVP23C-202ENST00000419890 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
TVP23C-202ENST00000419890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.07□□□□□ -0.642e-14■■□□□ 13.7
TVP23C-202ENST00000419890 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
TVP23C-202ENST00000419890 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
TVP23C-202ENST00000419890 POTEB3A0JP26 581 aa11.04□□□□□ -0.64
TVP23C-202ENST00000419890 POTEBQ6S5H4 581 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms