RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 PHF12Q96QT6 1004 aa8.46□□□□□ -1.06
PTPRC-207ENST00000418674 PLSCR2Q9NRY7 297 aa8.46□□□□□ -1.06
PTPRC-207ENST00000418674 FAM212AQ96EL1 285 aa8.45□□□□□ -1.06
PTPRC-207ENST00000418674 CCDC61Q9Y6R9 512 aa8.44□□□□□ -1.06
PTPRC-207ENST00000418674 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
PTPRC-207ENST00000418674 DCAF8Q5TAQ9 597 aa8.4□□□□□ -1.06
PTPRC-207ENST00000418674 GALR2O43603 387 aaPredicted RBP8.39□□□□□ -1.07
PTPRC-207ENST00000418674 SPOCK2Q92563 424 aa8.39□□□□□ -1.07
PTPRC-207ENST00000418674 DCBLD2Q96PD2 775 aa8.38□□□□□ -1.07
PTPRC-207ENST00000418674 KIF12Q96FN5 646 aa8.37□□□□□ -1.07
PTPRC-207ENST00000418674 MS4A3Q96HJ5 214 aa8.37□□□□□ -1.07
PTPRC-207ENST00000418674 GSE1Q14687 1217 aa8.36□□□□□ -1.07
PTPRC-207ENST00000418674 MAP3K13O43283 966 aa8.34□□□□□ -1.07
PTPRC-207ENST00000418674 POTEIP0CG38 1075 aa8.31□□□□□ -1.08
PTPRC-207ENST00000418674 SGIP1Q9BQI5 828 aa8.31□□□□□ -1.08
PTPRC-207ENST00000418674 PCDHB13Q9Y5F0 798 aa8.31□□□□□ -1.08
PTPRC-207ENST00000418674 PYGBP11216 843 aa8.3□□□□□ -1.08
PTPRC-207ENST00000418674 CIZ1Q9ULV3 898 aaPredicted RBP8.3□□□□□ -1.08
PTPRC-207ENST00000418674 IFNL1Q8IU54 200 aa8.25□□□□□ -1.09
PTPRC-207ENST00000418674 ATMINO43313 823 aaPredicted RBP8.24□□□□□ -1.09
PTPRC-207ENST00000418674 TIE1P35590 1138 aa8.24□□□□□ -1.09
PTPRC-207ENST00000418674 ASTLQ6HA08 431 aaPredicted RBP8.24□□□□□ -1.09
PTPRC-207ENST00000418674 CHRM1P11229 460 aaPredicted RBP8.23□□□□□ -1.09
PTPRC-207ENST00000418674 TRPC6Q9Y210 931 aa8.23□□□□□ -1.09
PTPRC-207ENST00000418674 TRIM41Q8WV44 630 aa8.22□□□□□ -1.09
PTPRC-207ENST00000418674 BMP2KQ9NSY1 1161 aaPredicted RBP8.22□□□□□ -1.09
PTPRC-207ENST00000418674 ZNF467Q7Z7K2 595 aaPredicted RBP8.21□□□□□ -1.1
PTPRC-207ENST00000418674 ATN1P54259 1190 aaPredicted RBP8.2□□□□□ -1.1
PTPRC-207ENST00000418674 PCDHB8Q9UN66 801 aa8.2□□□□□ -1.1
PTPRC-207ENST00000418674 TTLL13PA6NNM8 815 aa8.19□□□□□ -1.1
PTPRC-207ENST00000418674 PELP1Q8IZL8 1130 aaKnown RBP8.19□□□□□ -1.1
PTPRC-207ENST00000418674 SLC39A7Q92504 469 aa8.18□□□□□ -1.1
PTPRC-207ENST00000418674 TMEM106CQ9BVX2 250 aa8.17□□□□□ -1.1
PTPRC-207ENST00000418674 C7P10643 843 aa8.16□□□□□ -1.1
PTPRC-207ENST00000418674 METRNQ9UJH8 293 aa8.16□□□□□ -1.1
PTPRC-207ENST00000418674 TRIM35Q9UPQ4 493 aa8.15□□□□□ -1.1
PTPRC-207ENST00000418674 PCDH10Q9P2E7 1040 aa8.14□□□□□ -1.11
PTPRC-207ENST00000418674 POTEMA6NI47 508 aa8.11□□□□□ -1.11
PTPRC-207ENST00000418674 PSEN1P49768 467 aa8.11□□□□□ -1.11
PTPRC-207ENST00000418674 PDAP1Q13442 181 aaKnown RBP8.11□□□□□ -1.11
PTPRC-207ENST00000418674 IER5LQ5T953 404 aa8.1□□□□□ -1.11
PTPRC-207ENST00000418674 GOLGA2Q08379 1002 aa8.09□□□□□ -1.11
PTPRC-207ENST00000418674 ECM2O94769 699 aaPredicted RBP8.08□□□□□ -1.12
PTPRC-207ENST00000418674 SEC24BO95487 1268 aa8.08□□□□□ -1.12
PTPRC-207ENST00000418674 OTUD5Q96G74 571 aa8.08□□□□□ -1.12
PTPRC-207ENST00000418674 RIOK3O14730 519 aaKnown RBP8.07□□□□□ -1.12
PTPRC-207ENST00000418674 POTEGQ6S5H5 508 aa8.07□□□□□ -1.12
PTPRC-207ENST00000418674 PKD2Q13563 968 aa8.05□□□□□ -1.12
PTPRC-207ENST00000418674 RNF25Q96BH1 459 aaPredicted RBP8.05□□□□□ -1.12
PTPRC-207ENST00000418674 POTEB2H3BUK9 544 aa8.04□□□□□ -1.12
PTPRC-207ENST00000418674 VGFO15240 615 aaPredicted RBP8.04□□□□□ -1.12
PTPRC-207ENST00000418674 MKRN3Q13064 507 aaKnown RBP8.04□□□□□ -1.12
PTPRC-207ENST00000418674 TAOK2Q9UL54 1235 aa8.04□□□□□ -1.12
PTPRC-207ENST00000418674 POTEFA5A3E0 1075 aa8.03□□□□□ -1.12
PTPRC-207ENST00000418674 PLCG2P16885 1265 aa8.03□□□□□ -1.12
PTPRC-207ENST00000418674 COLQQ9Y215 455 aaPredicted RBP8.03□□□□□ -1.12
PTPRC-207ENST00000418674 CABP2Q9NPB3 220 aa8.02□□□□□ -1.13
PTPRC-207ENST00000418674 IRX5P78411 483 aaPredicted RBP8.01□□□□□ -1.13
PTPRC-207ENST00000418674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8□□□□□ -1.13
PTPRC-207ENST00000418674 MAMSTRQ6ZN01 415 aa8□□□□□ -1.13
PTPRC-207ENST00000418674 ZFP91Q96JP5 570 aaPredicted RBP8□□□□□ -1.13
PTPRC-207ENST00000418674 OCEL1Q9H607 264 aa8□□□□□ -1.13
PTPRC-207ENST00000418674 RGL2O15211 777 aa7.98□□□□□ -1.13
PTPRC-207ENST00000418674 POTEJP0CG39 1038 aa7.97□□□□□ -1.13
PTPRC-207ENST00000418674 SCUBE2Q9NQ36 999 aa7.97□□□□□ -1.13
PTPRC-207ENST00000418674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPRC-207ENST00000418674 EFCAB3Q8N7B9 438 aa7.94□□□□□ -1.14
PTPRC-207ENST00000418674 BCL11BQ9C0K0 894 aaPredicted RBP7.94□□□□□ -1.14
PTPRC-207ENST00000418674 STK25O00506 426 aa7.93□□□□□ -1.14
PTPRC-207ENST00000418674 PDCD7Q8N8D1 485 aaKnown RBP7.93□□□□□ -1.14
PTPRC-207ENST00000418674 STK24Q9Y6E0 443 aa7.93□□□□□ -1.14
PTPRC-207ENST00000418674 ILDR1Q86SU0 546 aaPredicted RBP7.91□□□□□ -1.14
PTPRC-207ENST00000418674 L3MBTL3Q96JM7 780 aaPredicted RBP7.91□□□□□ -1.14
PTPRC-207ENST00000418674 SOX12O15370 315 aa7.9□□□□□ -1.14
PTPRC-207ENST00000418674 G3V3G9 751 aa7.88□□□□□ -1.15
PTPRC-207ENST00000418674 DPY19L2Q6NUT2 758 aa7.86□□□□□ -1.15
PTPRC-207ENST00000418674 C3orf67Q6ZVT6 689 aa7.86□□□□□ -1.15
PTPRC-207ENST00000418674 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.86□□□□□ -1.15
PTPRC-207ENST00000418674 NLRP6P59044 892 aa7.85□□□□□ -1.15
PTPRC-207ENST00000418674 SLAIN1Q8ND83 568 aa7.85□□□□□ -1.15
PTPRC-207ENST00000418674 FAM163AQ96GL9 167 aaPredicted RBP7.85□□□□□ -1.15
PTPRC-207ENST00000418674 PHF8Q9UPP1 1060 aa7.85□□□□□ -1.15
PTPRC-207ENST00000418674 BOLA1Q9Y3E2 137 aa7.84□□□□□ -1.15
PTPRC-207ENST00000418674 HS6ST3Q8IZP7 471 aa7.83□□□□□ -1.16
PTPRC-207ENST00000418674 CHGAP10645 457 aaKnown RBP7.82□□□□□ -1.16
PTPRC-207ENST00000418674 AMER1Q5JTC6 1135 aaPredicted RBP7.82□□□□□ -1.16
PTPRC-207ENST00000418674 DCAF8L2P0C7V8 631 aa7.81□□□□□ -1.16
PTPRC-207ENST00000418674 MS4A4AQ96JQ5 239 aa7.81□□□□□ -1.16
PTPRC-207ENST00000418674 MFRPQ9BY79 579 aa7.81□□□□□ -1.16
PTPRC-207ENST00000418674 FBXO22Q8NEZ5 403 aa7.79□□□□□ -1.16
PTPRC-207ENST00000418674 MICALL2Q8IY33 904 aa7.77□□□□□ -1.17
PTPRC-207ENST00000418674 TMEM121BQ9BXQ6 578 aaPredicted RBP7.77□□□□□ -1.17
PTPRC-207ENST00000418674 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
PTPRC-207ENST00000418674 SNPHO15079 494 aa7.74□□□□□ -1.17
PTPRC-207ENST00000418674 DNAJC5Q9H3Z4 198 aa7.74□□□□□ -1.17
PTPRC-207ENST00000418674 RTN4Q9NQC3 1192 aaKnown RBP7.73□□□□□ -1.17
PTPRC-207ENST00000418674 CDAN1Q8IWY9 1227 aa7.71□□□□□ -1.18
PTPRC-207ENST00000418674 RYDENQ9NUL5 291 aaKnown RBP7.71□□□□□ -1.18
PTPRC-207ENST00000418674 NKX1-1Q15270 411 aaPredicted RBP7.69□□□□□ -1.18
PTPRC-207ENST00000418674 PPP1R37O75864 691 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms