RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 RGL2O15211 777 aa6.9□□□□□ -1.3
VPS41-206ENST00000418457 PAK3O75914 559 aaPredicted RBP6.9□□□□□ -1.3
VPS41-206ENST00000418457 PYGBP11216 843 aa6.87□□□□□ -1.31
VPS41-206ENST00000418457 CHRM1P11229 460 aaPredicted RBP6.87□□□□□ -1.31
VPS41-206ENST00000418457 CD44P16070 742 aaKnown RBP6.85□□□□□ -1.31
VPS41-206ENST00000418457 CCDC61Q9Y6R9 512 aa6.85□□□□□ -1.31
VPS41-206ENST00000418457 RIOK3O14730 519 aaKnown RBP6.83□□□□□ -1.32
VPS41-206ENST00000418457 RNF25Q96BH1 459 aaPredicted RBP6.83□□□□□ -1.32
VPS41-206ENST00000418457 ZRANB1Q9UGI0 708 aa6.83□□□□□ -1.32
VPS41-206ENST00000418457 TAOK2Q9UL54 1235 aa6.82□□□□□ -1.32
VPS41-206ENST00000418457 C19orf67A6NJJ6 358 aa6.81□□□□□ -1.32
VPS41-206ENST00000418457 VGFO15240 615 aaPredicted RBP6.79□□□□□ -1.32
VPS41-206ENST00000418457 ZNF467Q7Z7K2 595 aaPredicted RBP6.79□□□□□ -1.32
VPS41-206ENST00000418457 HAX1O00165 279 aa6.78□□□□□ -1.32
VPS41-206ENST00000418457 CHGAP10645 457 aaKnown RBP6.78□□□□□ -1.32
VPS41-206ENST00000418457 KIF12Q96FN5 646 aa6.77□□□□□ -1.33
VPS41-206ENST00000418457 PHF12Q96QT6 1004 aa6.77□□□□□ -1.33
VPS41-206ENST00000418457 PCDHB13Q9Y5F0 798 aa6.77□□□□□ -1.33
VPS41-206ENST00000418457 MAP3K13O43283 966 aa6.76□□□□□ -1.33
VPS41-206ENST00000418457 HS6ST3Q8IZP7 471 aa6.76□□□□□ -1.33
VPS41-206ENST00000418457 ZNF579Q8NAF0 562 aaKnown RBP6.76□□□□□ -1.33
VPS41-206ENST00000418457 SGIP1Q9BQI5 828 aa6.76□□□□□ -1.33
VPS41-206ENST00000418457 PCDHB8Q9UN66 801 aa6.76□□□□□ -1.33
VPS41-206ENST00000418457 BBXQ8WY36 941 aaPredicted RBP6.75□□□□□ -1.33
VPS41-206ENST00000418457 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.75□□□□□ -1.33
VPS41-206ENST00000418457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.74□□□□□ -1.33
VPS41-206ENST00000418457 STK25O00506 426 aa6.74□□□□□ -1.33
VPS41-206ENST00000418457 POTEHQ6S545 545 aa6.74□□□□□ -1.33
VPS41-206ENST00000418457 ZFP91Q96JP5 570 aaPredicted RBP6.74□□□□□ -1.33
VPS41-206ENST00000418457 PDAP1Q13442 181 aaKnown RBP6.73□□□□□ -1.33
VPS41-206ENST00000418457 IFNL1Q8IU54 200 aa6.73□□□□□ -1.33
VPS41-206ENST00000418457 BCL11BQ9C0K0 894 aaPredicted RBP6.72□□□□□ -1.33
VPS41-206ENST00000418457 STK24Q9Y6E0 443 aa6.72□□□□□ -1.33
VPS41-206ENST00000418457 SLC24A1O60721 1099 aa6.71□□□□□ -1.34
VPS41-206ENST00000418457 PLCB2Q00722 1185 aa6.71□□□□□ -1.34
VPS41-206ENST00000418457 PSEN1P49768 467 aa6.7□□□□□ -1.34
VPS41-206ENST00000418457 EVX2Q03828 476 aa6.7□□□□□ -1.34
VPS41-206ENST00000418457 MS4A3Q96HJ5 214 aa6.69□□□□□ -1.34
VPS41-206ENST00000418457 DNAJC5Q9H3Z4 198 aa6.69□□□□□ -1.34
VPS41-206ENST00000418457 CLCN6P51797 869 aa6.68□□□□□ -1.34
VPS41-206ENST00000418457 PAXIP1Q6ZW49 1069 aaPredicted RBP6.68□□□□□ -1.34
VPS41-206ENST00000418457 CFAP44Q96MT7 982 aa6.67□□□□□ -1.34
VPS41-206ENST00000418457 SPRYD3Q8NCJ5 442 aa6.66□□□□□ -1.34
VPS41-206ENST00000418457 NKX1-1Q15270 411 aaPredicted RBP6.65□□□□□ -1.34
VPS41-206ENST00000418457 GALR2O43603 387 aaPredicted RBP6.64□□□□□ -1.35
VPS41-206ENST00000418457 TRPC6Q9Y210 931 aa6.64□□□□□ -1.35
VPS41-206ENST00000418457 TIE1P35590 1138 aa6.63□□□□□ -1.35
VPS41-206ENST00000418457 HAP1P54257 671 aaPredicted RBP6.63□□□□□ -1.35
VPS41-206ENST00000418457 TMEM106CQ9BVX2 250 aa6.63□□□□□ -1.35
VPS41-206ENST00000418457 CABP2Q9NPB3 220 aa6.63□□□□□ -1.35
VPS41-206ENST00000418457 RYDENQ9NUL5 291 aaKnown RBP6.61□□□□□ -1.35
VPS41-206ENST00000418457 GTPBP6O43824 516 aaPredicted RBP6.6□□□□□ -1.35
VPS41-206ENST00000418457 GABBR2O75899 941 aa6.6□□□□□ -1.35
VPS41-206ENST00000418457 GOLGA2Q08379 1002 aa6.6□□□□□ -1.35
VPS41-206ENST00000418457 EFCAB3Q8N7B9 438 aa6.6□□□□□ -1.35
VPS41-206ENST00000418457 TTLL13PA6NNM8 815 aa6.59□□□□□ -1.35
VPS41-206ENST00000418457 BMP2KQ9NSY1 1161 aaPredicted RBP6.59□□□□□ -1.35
VPS41-206ENST00000418457 SOX12O15370 315 aa6.57□□□□□ -1.36
VPS41-206ENST00000418457 MKRN3Q13064 507 aaKnown RBP6.57□□□□□ -1.36
VPS41-206ENST00000418457 MFRPQ9BY79 579 aa6.56□□□□□ -1.36
VPS41-206ENST00000418457 TRIM35Q9UPQ4 493 aa6.56□□□□□ -1.36
VPS41-206ENST00000418457 NLRP6P59044 892 aa6.55□□□□□ -1.36
VPS41-206ENST00000418457 PHF8Q9UPP1 1060 aa6.55□□□□□ -1.36
VPS41-206ENST00000418457 ATMINO43313 823 aaPredicted RBP6.54□□□□□ -1.36
VPS41-206ENST00000418457 ASTLQ6HA08 431 aaPredicted RBP6.54□□□□□ -1.36
VPS41-206ENST00000418457 SP7Q8TDD2 431 aaPredicted RBP6.54□□□□□ -1.36
VPS41-206ENST00000418457 TSHZ2Q9NRE2 1034 aa6.54□□□□□ -1.36
VPS41-206ENST00000418457 ATN1P54259 1190 aaPredicted RBP6.53□□□□□ -1.36
VPS41-206ENST00000418457 FBXO22Q8NEZ5 403 aa6.53□□□□□ -1.36
VPS41-206ENST00000418457 DCBLD2Q96PD2 775 aa6.53□□□□□ -1.36
VPS41-206ENST00000418457 VSIG10Q8N0Z9 540 aa6.52□□□□□ -1.37
VPS41-206ENST00000418457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.5□□□□□ -1.374e-7■■■□□ 18.2
VPS41-206ENST00000418457 IER5LQ5T953 404 aa6.49□□□□□ -1.37
VPS41-206ENST00000418457 MS4A4AQ96JQ5 239 aa6.49□□□□□ -1.37
VPS41-206ENST00000418457 PPP1R37O75864 691 aa6.48□□□□□ -1.37
VPS41-206ENST00000418457 ILDR1Q86SU0 546 aaPredicted RBP6.47□□□□□ -1.37
VPS41-206ENST00000418457 IRX5P78411 483 aaPredicted RBP6.46□□□□□ -1.38
VPS41-206ENST00000418457 PELP1Q8IZL8 1130 aaKnown RBP6.46□□□□□ -1.38
VPS41-206ENST00000418457 KDM2AQ9Y2K7 1162 aa6.46□□□□□ -1.38
VPS41-206ENST00000418457 PLCG2P16885 1265 aa6.45□□□□□ -1.38
VPS41-206ENST00000418457 SLC39A7Q92504 469 aa6.45□□□□□ -1.38
VPS41-206ENST00000418457 OCEL1Q9H607 264 aa6.45□□□□□ -1.38
VPS41-206ENST00000418457 POTEIP0CG38 1075 aa6.44□□□□□ -1.38
VPS41-206ENST00000418457 PDCD7Q8N8D1 485 aaKnown RBP6.44□□□□□ -1.38
VPS41-206ENST00000418457 SEC24BO95487 1268 aa6.43□□□□□ -1.38
VPS41-206ENST00000418457 C7P10643 843 aa6.42□□□□□ -1.38
VPS41-206ENST00000418457 DPY19L2Q6NUT2 758 aa6.42□□□□□ -1.38
VPS41-206ENST00000418457 CADPS2Q86UW7 1296 aa6.42□□□□□ -1.38
VPS41-206ENST00000418457 METRNQ9UJH8 293 aa6.41□□□□□ -1.38
VPS41-206ENST00000418457 G3V3G9 751 aa6.4□□□□□ -1.38
VPS41-206ENST00000418457 COLQQ9Y215 455 aaPredicted RBP6.4□□□□□ -1.38
VPS41-206ENST00000418457 L3MBTL3Q96JM7 780 aaPredicted RBP6.39□□□□□ -1.39
VPS41-206ENST00000418457 POTEFA5A3E0 1075 aa6.38□□□□□ -1.39
VPS41-206ENST00000418457 MICALL2Q8IY33 904 aa6.38□□□□□ -1.39
VPS41-206ENST00000418457 WDR70Q9NW82 654 aa6.38□□□□□ -1.39
VPS41-206ENST00000418457 BOLA1Q9Y3E2 137 aa6.38□□□□□ -1.39
VPS41-206ENST00000418457 PDE4AP27815 886 aa6.36□□□□□ -1.39
VPS41-206ENST00000418457 NCKAP5LQ9HCH0 1330 aa6.35□□□□□ -1.39
VPS41-206ENST00000418457 TMEM121BQ9BXQ6 578 aaPredicted RBP6.35□□□□□ -1.39
VPS41-206ENST00000418457 LARP6Q9BRS8 491 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms