RNA–Protein interactions for RNA: ENST00000417942.5

XIST-202, X inactive specific transcript, humanhuman

TSL 3

Gene XIST, Length 724 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-202ENST00000417942 CLCN6P51797 869 aa13.14□□□□□ -0.31
XIST-202ENST00000417942 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
XIST-202ENST00000417942 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
XIST-202ENST00000417942 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
XIST-202ENST00000417942 KIF12Q96FN5 646 aa13.08□□□□□ -0.32
XIST-202ENST00000417942 FAM212AQ96EL1 285 aa13.07□□□□□ -0.32
XIST-202ENST00000417942 MS4A3Q96HJ5 214 aa13.07□□□□□ -0.32
XIST-202ENST00000417942 LHX8Q68G74 356 aa13.05□□□□□ -0.32
XIST-202ENST00000417942 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
XIST-202ENST00000417942 MAP3K13O43283 966 aa13.03□□□□□ -0.32
XIST-202ENST00000417942 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
XIST-202ENST00000417942 TRPC6Q9Y210 931 aa12.96□□□□□ -0.33
XIST-202ENST00000417942 PYGBP11216 843 aa12.94□□□□□ -0.34
XIST-202ENST00000417942 GSE1Q14687 1217 aa12.94□□□□□ -0.34
XIST-202ENST00000417942 DCBLD2Q96PD2 775 aa12.94□□□□□ -0.34
XIST-202ENST00000417942 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
XIST-202ENST00000417942 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
XIST-202ENST00000417942 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
XIST-202ENST00000417942 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
XIST-202ENST00000417942 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
XIST-202ENST00000417942 ATMINO43313 823 aaPredicted RBP12.86□□□□□ -0.35
XIST-202ENST00000417942 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
XIST-202ENST00000417942 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
XIST-202ENST00000417942 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
XIST-202ENST00000417942 TIE1P35590 1138 aa12.82□□□□□ -0.36
XIST-202ENST00000417942 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
XIST-202ENST00000417942 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
XIST-202ENST00000417942 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
XIST-202ENST00000417942 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
XIST-202ENST00000417942 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
XIST-202ENST00000417942 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
XIST-202ENST00000417942 METRNQ9UJH8 293 aa12.69□□□□□ -0.38
XIST-202ENST00000417942 SLC39A7Q92504 469 aa12.68□□□□□ -0.38
XIST-202ENST00000417942 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
XIST-202ENST00000417942 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
XIST-202ENST00000417942 RNF25Q96BH1 459 aaPredicted RBP12.67□□□□□ -0.38
XIST-202ENST00000417942 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
XIST-202ENST00000417942 C7P10643 843 aa12.66□□□□□ -0.38
XIST-202ENST00000417942 PKD2Q13563 968 aa12.66□□□□□ -0.38
XIST-202ENST00000417942 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
XIST-202ENST00000417942 PSEN1P49768 467 aa12.63□□□□□ -0.39
XIST-202ENST00000417942 PDAP1Q13442 181 aaKnown RBP12.6□□□□□ -0.39
XIST-202ENST00000417942 COLQQ9Y215 455 aaPredicted RBP12.59□□□□□ -0.39
XIST-202ENST00000417942 IER5LQ5T953 404 aa12.58□□□□□ -0.4
XIST-202ENST00000417942 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
XIST-202ENST00000417942 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
XIST-202ENST00000417942 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
XIST-202ENST00000417942 IRX5P78411 483 aaPredicted RBP12.53□□□□□ -0.4
XIST-202ENST00000417942 RGL2O15211 777 aa12.51□□□□□ -0.41
XIST-202ENST00000417942 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
XIST-202ENST00000417942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.48□□□□□ -0.41
XIST-202ENST00000417942 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
XIST-202ENST00000417942 SEC24BO95487 1268 aa12.48□□□□□ -0.41
XIST-202ENST00000417942 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
XIST-202ENST00000417942 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
XIST-202ENST00000417942 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
XIST-202ENST00000417942 PLCG2P16885 1265 aa12.43□□□□□ -0.42
XIST-202ENST00000417942 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
XIST-202ENST00000417942 ILDR1Q86SU0 546 aaPredicted RBP12.43□□□□□ -0.42
XIST-202ENST00000417942 OCEL1Q9H607 264 aa12.43□□□□□ -0.42
XIST-202ENST00000417942 GOLGA2Q08379 1002 aa12.41□□□□□ -0.42
XIST-202ENST00000417942 EFCAB3Q8N7B9 438 aa12.4□□□□□ -0.42
XIST-202ENST00000417942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
XIST-202ENST00000417942 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
XIST-202ENST00000417942 SLC24A1O60721 1099 aa12.34□□□□□ -0.43
XIST-202ENST00000417942 DPY19L2Q6NUT2 758 aa12.33□□□□□ -0.44
XIST-202ENST00000417942 MAMSTRQ6ZN01 415 aa12.33□□□□□ -0.44
XIST-202ENST00000417942 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
XIST-202ENST00000417942 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
XIST-202ENST00000417942 POTEMA6NI47 508 aa12.31□□□□□ -0.44
XIST-202ENST00000417942 STK25O00506 426 aa12.31□□□□□ -0.44
XIST-202ENST00000417942 SCUBE2Q9NQ36 999 aa12.3□□□□□ -0.44
XIST-202ENST00000417942 MS4A4AQ96JQ5 239 aa12.28□□□□□ -0.44
XIST-202ENST00000417942 SOX12O15370 315 aa12.27□□□□□ -0.45
XIST-202ENST00000417942 POTEGQ6S5H5 508 aa12.27□□□□□ -0.45
XIST-202ENST00000417942 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
XIST-202ENST00000417942 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
XIST-202ENST00000417942 MFRPQ9BY79 579 aa12.23□□□□□ -0.45
XIST-202ENST00000417942 HS6ST3Q8IZP7 471 aa12.22□□□□□ -0.45
XIST-202ENST00000417942 L3MBTL3Q96JM7 780 aaPredicted RBP12.22□□□□□ -0.45
XIST-202ENST00000417942 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
XIST-202ENST00000417942 SLAIN1Q8ND83 568 aa12.17□□□□□ -0.46
XIST-202ENST00000417942 TMEM121BQ9BXQ6 578 aaPredicted RBP12.17□□□□□ -0.46
XIST-202ENST00000417942 NLRP6P59044 892 aa12.16□□□□□ -0.46
XIST-202ENST00000417942 RTN4Q9NQC3 1192 aaKnown RBP12.16□□□□□ -0.46
XIST-202ENST00000417942 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
XIST-202ENST00000417942 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.15□□□□□ -0.46
XIST-202ENST00000417942 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
XIST-202ENST00000417942 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
XIST-202ENST00000417942 LCE2DQ5TA82 110 aaPredicted RBP12.12□□□□□ -0.47
XIST-202ENST00000417942 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
XIST-202ENST00000417942 MICALL2Q8IY33 904 aa12.12□□□□□ -0.47
XIST-202ENST00000417942 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
XIST-202ENST00000417942 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
XIST-202ENST00000417942 MYT1Q01538 1121 aa12.1□□□□□ -0.47
XIST-202ENST00000417942 TMEM92Q6UXU6 159 aa12.07□□□□□ -0.48
XIST-202ENST00000417942 G3V3G9 751 aa12.06□□□□□ -0.48
XIST-202ENST00000417942 PPP1R37O75864 691 aa12.06□□□□□ -0.48
XIST-202ENST00000417942 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
XIST-202ENST00000417942 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms