RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 GLIPR1L2Q4G1C9 344 aa9.64□□□□□ -0.87
CLIP4-205ENST00000415891 TICAM2Q86XR7 235 aa9.63□□□□□ -0.87
CLIP4-205ENST00000415891 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-205ENST00000415891 DEKP35659 375 aaKnown RBP9.62□□□□□ -0.87
CLIP4-205ENST00000415891 ZMYND15Q9H091 742 aa9.61□□□□□ -0.87
CLIP4-205ENST00000415891 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
CLIP4-205ENST00000415891 MYT1LQ9UL68 1186 aa9.58□□□□□ -0.88
CLIP4-205ENST00000415891 ZBTB22O15209 634 aa9.57□□□□□ -0.88
CLIP4-205ENST00000415891 PPARGC1BQ86YN6 1023 aaKnown RBP9.56□□□□□ -0.88
CLIP4-205ENST00000415891 CLSTN1O94985 981 aa9.56□□□□□ -0.88
CLIP4-205ENST00000415891 ZNF592Q92610 1267 aa9.56□□□□□ -0.88
CLIP4-205ENST00000415891 ZFP91Q96JP5 570 aaPredicted RBP9.55□□□□□ -0.88
CLIP4-205ENST00000415891 NCLP19338 710 aaKnown RBP9.53□□□□□ -0.88
CLIP4-205ENST00000415891 NAP1L2Q9ULW6 460 aaPredicted RBP9.53□□□□□ -0.88
CLIP4-205ENST00000415891 CHRM1P11229 460 aaPredicted RBP9.51□□□□□ -0.89
CLIP4-205ENST00000415891 FKBP8Q14318 412 aa9.51□□□□□ -0.89
CLIP4-205ENST00000415891 TMED8Q6PL24 325 aaPredicted RBP9.51□□□□□ -0.89
CLIP4-205ENST00000415891 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
CLIP4-205ENST00000415891 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
CLIP4-205ENST00000415891 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
CLIP4-205ENST00000415891 ARID3AQ99856 593 aa9.48□□□□□ -0.89
CLIP4-205ENST00000415891 ZBTB7CA1YPR0 619 aa9.47□□□□□ -0.89
CLIP4-205ENST00000415891 CNPY4Q8N129 248 aa9.47□□□□□ -0.89
CLIP4-205ENST00000415891 PSMD1Q99460 953 aa9.47□□□□□ -0.89
CLIP4-205ENST00000415891 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.9
CLIP4-205ENST00000415891 PRDM10Q9NQV6 1147 aa9.45□□□□□ -0.9
CLIP4-205ENST00000415891 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
CLIP4-205ENST00000415891 CERS3Q8IU89 383 aa9.44□□□□□ -0.9
CLIP4-205ENST00000415891 ZNF692Q9BU19 519 aaPredicted RBP9.44□□□□□ -0.9
CLIP4-205ENST00000415891 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.44□□□□□ -0.9
CLIP4-205ENST00000415891 SECISBP2LQ93073 1101 aaKnown RBP9.41□□□□□ -0.9
CLIP4-205ENST00000415891 RNF216Q9NWF9 866 aaPredicted RBP9.4□□□□□ -0.9
CLIP4-205ENST00000415891 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
CLIP4-205ENST00000415891 CWC22Q9HCG8 908 aaKnown RBP9.39□□□□□ -0.91
CLIP4-205ENST00000415891 PLCD4Q9BRC7 762 aa9.38□□□□□ -0.91
CLIP4-205ENST00000415891 NBR1Q14596 966 aa9.38□□□□□ -0.91
CLIP4-205ENST00000415891 PRDM16Q9HAZ2 1276 aa9.38□□□□□ -0.91
CLIP4-205ENST00000415891 GRIPAP1Q4V328 841 aa9.36□□□□□ -0.91
CLIP4-205ENST00000415891 CHMP4BQ9H444 224 aaKnown RBP9.35□□□□□ -0.91
CLIP4-205ENST00000415891 FTSJ3Q8IY81 847 aaKnown RBP9.34□□□□□ -0.91
CLIP4-205ENST00000415891 WWC1Q8IX03 1113 aa9.33□□□□□ -0.92
CLIP4-205ENST00000415891 MAPK8IP2Q13387 824 aaPredicted RBP9.33□□□□□ -0.92
CLIP4-205ENST00000415891 ZNF428Q96B54 188 aa9.33□□□□□ -0.92
CLIP4-205ENST00000415891 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
CLIP4-205ENST00000415891 KCNG1Q9UIX4 513 aa9.31□□□□□ -0.92
CLIP4-205ENST00000415891 SETQ01105 290 aaPredicted RBP9.31□□□□□ -0.92
CLIP4-205ENST00000415891 ARID4BQ4LE39 1312 aaPredicted RBP9.3□□□□□ -0.92
CLIP4-205ENST00000415891 PPP4R3CPQ6ZMV5 832 aa9.3□□□□□ -0.92
CLIP4-205ENST00000415891 PTMSP20962 102 aa9.29□□□□□ -0.92
CLIP4-205ENST00000415891 FAM177A1Q8N128 213 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-205ENST00000415891 MCCP23508 829 aa9.29□□□□□ -0.92
CLIP4-205ENST00000415891 ZNF526Q8TF50 670 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-205ENST00000415891 BBXQ8WY36 941 aaPredicted RBP9.28□□□□□ -0.92
CLIP4-205ENST00000415891 FAM43BQ6ZT52 329 aaPredicted RBP9.27□□□□□ -0.93
CLIP4-205ENST00000415891 RGS22Q8NE09 1264 aa9.27□□□□□ -0.93
CLIP4-205ENST00000415891 C1orf115Q9H7X2 142 aa9.26□□□□□ -0.93
CLIP4-205ENST00000415891 RAD21O60216 631 aa9.26□□□□□ -0.93
CLIP4-205ENST00000415891 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
CLIP4-205ENST00000415891 PTMAP06454 111 aaKnown RBP9.24□□□□□ -0.93
CLIP4-205ENST00000415891 KCTD17Q8N5Z5 321 aa9.24□□□□□ -0.93
CLIP4-205ENST00000415891 TSHZ2Q9NRE2 1034 aa9.24□□□□□ -0.93
CLIP4-205ENST00000415891 NEFMP07197 916 aa9.22□□□□□ -0.93
CLIP4-205ENST00000415891 ANAPC15P60006 121 aa9.22□□□□□ -0.93
CLIP4-205ENST00000415891 CCDC27Q2M243 656 aa9.22□□□□□ -0.93
CLIP4-205ENST00000415891 PCGF6Q9BYE7 350 aa9.22□□□□□ -0.93
CLIP4-205ENST00000415891 MTMR7Q9Y216 660 aa9.22□□□□□ -0.93
CLIP4-205ENST00000415891 PPM1GO15355 546 aaPredicted RBP9.21□□□□□ -0.93
CLIP4-205ENST00000415891 MAFGO15525 162 aa9.21□□□□□ -0.93
CLIP4-205ENST00000415891 RBM25P49756 843 aaKnown RBP9.21□□□□□ -0.93
CLIP4-205ENST00000415891 DMRT2Q9Y5R5 561 aa9.21□□□□□ -0.93
CLIP4-205ENST00000415891 USP35Q9P2H5 1018 aa9.2□□□□□ -0.94
CLIP4-205ENST00000415891 DNAJC2Q99543 621 aaKnown RBP9.2□□□□□ -0.94
CLIP4-205ENST00000415891 CANXP27824 592 aaKnown RBP9.19□□□□□ -0.94
CLIP4-205ENST00000415891 GPATCH11Q8N954 259 aa9.18□□□□□ -0.94
CLIP4-205ENST00000415891 FOXD4L5Q5VV16 416 aaPredicted RBP9.17□□□□□ -0.94
CLIP4-205ENST00000415891 FOXD4L4Q8WXT5 416 aaPredicted RBP9.17□□□□□ -0.94
CLIP4-205ENST00000415891 FAM193AP78312 1265 aa9.17□□□□□ -0.94
CLIP4-205ENST00000415891 STAC3Q96MF2 364 aa9.16□□□□□ -0.94
CLIP4-205ENST00000415891 BRPF1P55201 1214 aaPredicted RBP9.16□□□□□ -0.94
CLIP4-205ENST00000415891 CNGB1Q14028 1251 aaPredicted RBP9.15□□□□□ -0.95
CLIP4-205ENST00000415891 NPM3O75607 178 aaKnown RBP9.14□□□□□ -0.95
CLIP4-205ENST00000415891 YTHDC1Q96MU7 727 aaKnown RBP9.14□□□□□ -0.95
CLIP4-205ENST00000415891 KDM4AO75164 1064 aa9.13□□□□□ -0.95
CLIP4-205ENST00000415891 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
CLIP4-205ENST00000415891 OS9Q13438 667 aaPredicted RBP9.12□□□□□ -0.95
CLIP4-205ENST00000415891 CLGNO14967 610 aa9.1□□□□□ -0.95
CLIP4-205ENST00000415891 PHF14O94880 888 aa9.1□□□□□ -0.95
CLIP4-205ENST00000415891 PATL2C9JE40 543 aaKnown RBP9.09□□□□□ -0.95
CLIP4-205ENST00000415891 VGFO15240 615 aaPredicted RBP9.09□□□□□ -0.95
CLIP4-205ENST00000415891 IL27Q8NEV9 243 aa9.07□□□□□ -0.96
CLIP4-205ENST00000415891 ZNF622Q969S3 477 aaKnown RBP eCLIP9.07□□□□□ -0.96
CLIP4-205ENST00000415891 PLEKHD1A6NEE1 506 aa9.06□□□□□ -0.96
CLIP4-205ENST00000415891 HSP90AB4PQ58FF6 505 aa9.06□□□□□ -0.96
CLIP4-205ENST00000415891 ARID3CA6NKF2 412 aa9.06□□□□□ -0.96
CLIP4-205ENST00000415891 NISCHQ9Y2I1 1504 aa9.05□□□□□ -0.96
CLIP4-205ENST00000415891 MMP14P50281 582 aa9.05□□□□□ -0.96
CLIP4-205ENST00000415891 FAM50AQ14320 339 aaKnown RBP9.04□□□□□ -0.96
CLIP4-205ENST00000415891 EXOC8Q8IYI6 725 aa9.04□□□□□ -0.96
CLIP4-205ENST00000415891 TMTC2Q8N394 836 aa9.04□□□□□ -0.96
CLIP4-205ENST00000415891 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms