RNA–Protein interactions for RNA: ENST00000411293.1

RNU6-1054P-201, Transcript of RNA, U6 small nuclear 1054, pseudogene, humanhuman

BASIC

Gene RNU6-1054P, Length 104 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1054P-201ENST00000411293 C7P10643 843 aa3.55□□□□□ -1.84
RNU6-1054P-201ENST00000411293 SLC39A7Q92504 469 aa3.55□□□□□ -1.84
RNU6-1054P-201ENST00000411293 CREBZFQ9NS37 354 aa3.54□□□□□ -1.84
RNU6-1054P-201ENST00000411293 SCUBE2Q9NQ36 999 aa3.53□□□□□ -1.84
RNU6-1054P-201ENST00000411293 ASTLQ6HA08 431 aaPredicted RBP3.52□□□□□ -1.85
RNU6-1054P-201ENST00000411293 METRNQ9UJH8 293 aa3.52□□□□□ -1.85
RNU6-1054P-201ENST00000411293 ATMINO43313 823 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1054P-201ENST00000411293 PHF12Q96QT6 1004 aa3.49□□□□□ -1.85
RNU6-1054P-201ENST00000411293 PELP1Q8IZL8 1130 aaKnown RBP3.48□□□□□ -1.85
RNU6-1054P-201ENST00000411293 MS4A3Q96HJ5 214 aa3.46□□□□□ -1.86
RNU6-1054P-201ENST00000411293 SPDYE4A6NLX3 237 aa3.45□□□□□ -1.86
RNU6-1054P-201ENST00000411293 PLEKHG5O94827 1062 aa3.44□□□□□ -1.86
RNU6-1054P-201ENST00000411293 MNX1P50219 401 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1054P-201ENST00000411293 POTEJP0CG39 1038 aa3.43□□□□□ -1.86
RNU6-1054P-201ENST00000411293 TIE1P35590 1138 aa3.43□□□□□ -1.86
RNU6-1054P-201ENST00000411293 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
RNU6-1054P-201ENST00000411293 SEC24BO95487 1268 aa3.42□□□□□ -1.86
RNU6-1054P-201ENST00000411293 ATN1P54259 1190 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1054P-201ENST00000411293 IER5LQ5T953 404 aa3.42□□□□□ -1.86
RNU6-1054P-201ENST00000411293 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
RNU6-1054P-201ENST00000411293 KIF12Q96FN5 646 aa3.41□□□□□ -1.86
RNU6-1054P-201ENST00000411293 TSPYL2Q9H2G4 693 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1054P-201ENST00000411293 CCDC61Q9Y6R9 512 aa3.41□□□□□ -1.86
RNU6-1054P-201ENST00000411293 SGIP1Q9BQI5 828 aa3.4□□□□□ -1.87
RNU6-1054P-201ENST00000411293 BMP2KQ9NSY1 1161 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1054P-201ENST00000411293 SNPHO15079 494 aa3.39□□□□□ -1.87
RNU6-1054P-201ENST00000411293 TMEM121BQ9BXQ6 578 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1054P-201ENST00000411293 POTEFA5A3E0 1075 aa3.37□□□□□ -1.87
RNU6-1054P-201ENST00000411293 SLAIN1Q8ND83 568 aa3.37□□□□□ -1.87
RNU6-1054P-201ENST00000411293 TTLL13PA6NNM8 815 aa3.36□□□□□ -1.87
RNU6-1054P-201ENST00000411293 MAP3K13O43283 966 aa3.36□□□□□ -1.87
RNU6-1054P-201ENST00000411293 ST18O60284 1047 aa3.35□□□□□ -1.87
RNU6-1054P-201ENST00000411293 PLCG2P16885 1265 aa3.35□□□□□ -1.87
RNU6-1054P-201ENST00000411293 ZBTB47Q9UFB7 747 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1054P-201ENST00000411293 TRIM35Q9UPQ4 493 aa3.35□□□□□ -1.87
RNU6-1054P-201ENST00000411293 COLQQ9Y215 455 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1054P-201ENST00000411293 PROM2Q8N271 834 aa3.33□□□□□ -1.88
RNU6-1054P-201ENST00000411293 MIER1Q8N108 512 aa3.32□□□□□ -1.88
RNU6-1054P-201ENST00000411293 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.32□□□□□ -1.88
RNU6-1054P-201ENST00000411293 TRPC6Q9Y210 931 aa3.32□□□□□ -1.88
RNU6-1054P-201ENST00000411293 PCDHB13Q9Y5F0 798 aa3.32□□□□□ -1.88
RNU6-1054P-201ENST00000411293 OCEL1Q9H607 264 aa3.31□□□□□ -1.88
RNU6-1054P-201ENST00000411293 RASEFQ8IZ41 740 aa3.3□□□□□ -1.88
RNU6-1054P-201ENST00000411293 TMEM106CQ9BVX2 250 aa3.3□□□□□ -1.88
RNU6-1054P-201ENST00000411293 IRX5P78411 483 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1054P-201ENST00000411293 RNF166Q96A37 237 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1054P-201ENST00000411293 FAM212AQ96EL1 285 aa3.29□□□□□ -1.88
RNU6-1054P-201ENST00000411293 PLCD3Q8N3E9 789 aa3.28□□□□□ -1.88
RNU6-1054P-201ENST00000411293 EMP3P54852 163 aa3.27□□□□□ -1.89
RNU6-1054P-201ENST00000411293 FKBP8Q14318 412 aa3.27□□□□□ -1.89
RNU6-1054P-201ENST00000411293 C3orf67Q6ZVT6 689 aa3.27□□□□□ -1.89
RNU6-1054P-201ENST00000411293 IFNL1Q8IU54 200 aa3.27□□□□□ -1.89
RNU6-1054P-201ENST00000411293 L3MBTL3Q96JM7 780 aaPredicted RBP3.27□□□□□ -1.89
RNU6-1054P-201ENST00000411293 MARVELD3Q96A59 401 aa3.26□□□□□ -1.89
RNU6-1054P-201ENST00000411293 NUBP1P53384 320 aa3.25□□□□□ -1.89
RNU6-1054P-201ENST00000411293 GOLGA2Q08379 1002 aa3.24□□□□□ -1.89
RNU6-1054P-201ENST00000411293 HS3ST6Q96QI5 342 aa3.24□□□□□ -1.89
RNU6-1054P-201ENST00000411293 MKRN3Q13064 507 aaKnown RBP3.23□□□□□ -1.89
RNU6-1054P-201ENST00000411293 FAM205CA6NFA0 338 aa3.22□□□□□ -1.89
RNU6-1054P-201ENST00000411293 G3V3G9 751 aa3.22□□□□□ -1.89
RNU6-1054P-201ENST00000411293 DCAF8Q5TAQ9 597 aa3.22□□□□□ -1.89
RNU6-1054P-201ENST00000411293 KRTAP3-3Q9BYR6 98 aa3.22□□□□□ -1.89
RNU6-1054P-201ENST00000411293 KRTAP3-2Q9BYR7 98 aa3.22□□□□□ -1.89
RNU6-1054P-201ENST00000411293 PTGER2P43116 358 aa3.21□□□□□ -1.9
RNU6-1054P-201ENST00000411293 ZNF467Q7Z7K2 595 aaPredicted RBP3.21□□□□□ -1.9
RNU6-1054P-201ENST00000411293 RTN4Q9NQC3 1192 aaKnown RBP3.21□□□□□ -1.9
RNU6-1054P-201ENST00000411293 RIMBP2O15034 1052 aa3.2□□□□□ -1.9
RNU6-1054P-201ENST00000411293 IRX2Q9BZI1 471 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1054P-201ENST00000411293 DOK7Q18PE1 504 aa3.19□□□□□ -1.9
RNU6-1054P-201ENST00000411293 ZNF710Q8N1W2 664 aa3.19□□□□□ -1.9
RNU6-1054P-201ENST00000411293 PYGBP11216 843 aa3.18□□□□□ -1.9
RNU6-1054P-201ENST00000411293 HOXB1P14653 301 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1054P-201ENST00000411293 GSE1Q14687 1217 aa3.18□□□□□ -1.9
RNU6-1054P-201ENST00000411293 PDCD7Q8N8D1 485 aaKnown RBP3.18□□□□□ -1.9
RNU6-1054P-201ENST00000411293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.18□□□□□ -1.9
RNU6-1054P-201ENST00000411293 ERBB3P21860 1342 aa3.18□□□□□ -1.9
RNU6-1054P-201ENST00000411293 MYT1LQ9UL68 1186 aa3.17□□□□□ -1.9
RNU6-1054P-201ENST00000411293 POTEB3A0JP26 581 aa3.16□□□□□ -1.9
RNU6-1054P-201ENST00000411293 CHRM1P11229 460 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1054P-201ENST00000411293 POTEBQ6S5H4 581 aa3.16□□□□□ -1.9
RNU6-1054P-201ENST00000411293 ZSWIM6Q9HCJ5 1215 aa3.16□□□□□ -1.9
RNU6-1054P-201ENST00000411293 PCDHB8Q9UN66 801 aa3.16□□□□□ -1.9
RNU6-1054P-201ENST00000411293 ILDR1Q86SU0 546 aaPredicted RBP3.15□□□□□ -1.91
RNU6-1054P-201ENST00000411293 FBXO3Q9UK99 471 aa3.15□□□□□ -1.91
RNU6-1054P-201ENST00000411293 BOLA1Q9Y3E2 137 aa3.15□□□□□ -1.91
RNU6-1054P-201ENST00000411293 RGS20O76081 388 aa3.14□□□□□ -1.91
RNU6-1054P-201ENST00000411293 PSEN1P49768 467 aa3.14□□□□□ -1.91
RNU6-1054P-201ENST00000411293 ZNF687Q8N1G0 1237 aa3.14□□□□□ -1.91
RNU6-1054P-201ENST00000411293 HOXB3P14651 431 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1054P-201ENST00000411293 PDAP1Q13442 181 aaKnown RBP3.13□□□□□ -1.91
RNU6-1054P-201ENST00000411293 PLA2G2EQ9NZK7 142 aa3.13□□□□□ -1.91
RNU6-1054P-201ENST00000411293 VARS2Q5ST30 1063 aaKnown RBP3.12□□□□□ -1.91
RNU6-1054P-201ENST00000411293 AMER1Q5JTC6 1135 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1054P-201ENST00000411293 PBX2P40425 430 aa3.1□□□□□ -1.91
RNU6-1054P-201ENST00000411293 KLHL34Q8N239 644 aa3.1□□□□□ -1.91
RNU6-1054P-201ENST00000411293 CABP2Q9NPB3 220 aa3.09□□□□□ -1.91
RNU6-1054P-201ENST00000411293 DPY19L2Q6NUT2 758 aa3.08□□□□□ -1.92
RNU6-1054P-201ENST00000411293 HCSTQ9UBK5 93 aa3.08□□□□□ -1.92
RNU6-1054P-201ENST00000411293 LSM11P83369 360 aaKnown RBP eCLIP3.07□□□□□ -1.92
RNU6-1054P-201ENST00000411293 GPR153Q6NV75 609 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms