RNA–Protein interactions for RNA: ENST00000411196.1

RN7SKP140-201, Transcript of RNA, 7SK small nuclear pseudogene 140, humanhuman

BASIC

Gene RN7SKP140, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP140-201ENST00000411196 LHX8Q68G74 356 aa10.58□□□□□ -0.72
RN7SKP140-201ENST00000411196 PELP1Q8IZL8 1130 aaKnown RBP10.57□□□□□ -0.72
RN7SKP140-201ENST00000411196 KIF12Q96FN5 646 aa10.56□□□□□ -0.72
RN7SKP140-201ENST00000411196 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
RN7SKP140-201ENST00000411196 TRPC6Q9Y210 931 aa10.53□□□□□ -0.72
RN7SKP140-201ENST00000411196 MAP3K13O43283 966 aa10.5□□□□□ -0.73
RN7SKP140-201ENST00000411196 ASTLQ6HA08 431 aaPredicted RBP10.49□□□□□ -0.73
RN7SKP140-201ENST00000411196 FBXO3Q9UK99 471 aa10.49□□□□□ -0.73
RN7SKP140-201ENST00000411196 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
RN7SKP140-201ENST00000411196 ATMINO43313 823 aaPredicted RBP10.48□□□□□ -0.73
RN7SKP140-201ENST00000411196 VASPP50552 380 aaPredicted RBP10.47□□□□□ -0.73
RN7SKP140-201ENST00000411196 ZBTB47Q9UFB7 747 aaPredicted RBP10.45□□□□□ -0.74
RN7SKP140-201ENST00000411196 ATN1P54259 1190 aaPredicted RBP10.43□□□□□ -0.74
RN7SKP140-201ENST00000411196 BMP2KQ9NSY1 1161 aaPredicted RBP10.42□□□□□ -0.74
RN7SKP140-201ENST00000411196 POTEJP0CG39 1038 aa10.38□□□□□ -0.75
RN7SKP140-201ENST00000411196 FAM212AQ96EL1 285 aa10.38□□□□□ -0.75
RN7SKP140-201ENST00000411196 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
RN7SKP140-201ENST00000411196 METRNQ9UJH8 293 aa10.37□□□□□ -0.75
RN7SKP140-201ENST00000411196 POTEFA5A3E0 1075 aa10.36□□□□□ -0.75
RN7SKP140-201ENST00000411196 IFNLR1Q8IU57 520 aaPredicted RBP10.36□□□□□ -0.75
RN7SKP140-201ENST00000411196 OTUD5Q96G74 571 aa10.36□□□□□ -0.75
RN7SKP140-201ENST00000411196 PCDHB13Q9Y5F0 798 aa10.36□□□□□ -0.75
RN7SKP140-201ENST00000411196 TIE1P35590 1138 aa10.35□□□□□ -0.75
RN7SKP140-201ENST00000411196 TTLL13PA6NNM8 815 aa10.34□□□□□ -0.75
RN7SKP140-201ENST00000411196 DCAF8Q5TAQ9 597 aa10.33□□□□□ -0.76
RN7SKP140-201ENST00000411196 SLC39A7Q92504 469 aa10.33□□□□□ -0.76
RN7SKP140-201ENST00000411196 SGIP1Q9BQI5 828 aa10.33□□□□□ -0.76
RN7SKP140-201ENST00000411196 PYGBP11216 843 aa10.32□□□□□ -0.76
RN7SKP140-201ENST00000411196 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
RN7SKP140-201ENST00000411196 C7P10643 843 aa10.31□□□□□ -0.76
RN7SKP140-201ENST00000411196 COLQQ9Y215 455 aaPredicted RBP10.27□□□□□ -0.77
RN7SKP140-201ENST00000411196 PCDHB8Q9UN66 801 aa10.26□□□□□ -0.77
RN7SKP140-201ENST00000411196 TRIM35Q9UPQ4 493 aa10.26□□□□□ -0.77
RN7SKP140-201ENST00000411196 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
RN7SKP140-201ENST00000411196 SPOCK2Q92563 424 aa10.21□□□□□ -0.77
RN7SKP140-201ENST00000411196 GSE1Q14687 1217 aa10.2□□□□□ -0.78
RN7SKP140-201ENST00000411196 CHRM1P11229 460 aaPredicted RBP10.17□□□□□ -0.78
RN7SKP140-201ENST00000411196 IER5LQ5T953 404 aa10.16□□□□□ -0.78
RN7SKP140-201ENST00000411196 IRX5P78411 483 aaPredicted RBP10.13□□□□□ -0.79
RN7SKP140-201ENST00000411196 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
RN7SKP140-201ENST00000411196 SEC24BO95487 1268 aa10.11□□□□□ -0.79
RN7SKP140-201ENST00000411196 ZNF467Q7Z7K2 595 aaPredicted RBP10.1□□□□□ -0.79
RN7SKP140-201ENST00000411196 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
RN7SKP140-201ENST00000411196 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
RN7SKP140-201ENST00000411196 PSEN1P49768 467 aa10.06□□□□□ -0.8
RN7SKP140-201ENST00000411196 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
RN7SKP140-201ENST00000411196 PLCG2P16885 1265 aa10.03□□□□□ -0.8
RN7SKP140-201ENST00000411196 PDCD7Q8N8D1 485 aaKnown RBP10.03□□□□□ -0.8
RN7SKP140-201ENST00000411196 RNF25Q96BH1 459 aaPredicted RBP10.02□□□□□ -0.81
RN7SKP140-201ENST00000411196 OCEL1Q9H607 264 aa10.02□□□□□ -0.81
RN7SKP140-201ENST00000411196 PDAP1Q13442 181 aaKnown RBP10.01□□□□□ -0.81
RN7SKP140-201ENST00000411196 ILDR1Q86SU0 546 aaPredicted RBP9.98□□□□□ -0.81
RN7SKP140-201ENST00000411196 POTEMA6NI47 508 aa9.95□□□□□ -0.82
RN7SKP140-201ENST00000411196 CABP2Q9NPB3 220 aa9.95□□□□□ -0.82
RN7SKP140-201ENST00000411196 DPY19L2Q6NUT2 758 aa9.94□□□□□ -0.82
RN7SKP140-201ENST00000411196 POTEGQ6S5H5 508 aa9.94□□□□□ -0.82
RN7SKP140-201ENST00000411196 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
RN7SKP140-201ENST00000411196 SLAIN1Q8ND83 568 aa9.93□□□□□ -0.82
RN7SKP140-201ENST00000411196 FAM163AQ96GL9 167 aaPredicted RBP9.93□□□□□ -0.82
RN7SKP140-201ENST00000411196 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
RN7SKP140-201ENST00000411196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.92□□□□□ -0.82
RN7SKP140-201ENST00000411196 GOLGA2Q08379 1002 aa9.91□□□□□ -0.82
RN7SKP140-201ENST00000411196 RIOK3O14730 519 aaKnown RBP9.87□□□□□ -0.83
RN7SKP140-201ENST00000411196 EFCAB3Q8N7B9 438 aa9.87□□□□□ -0.83
RN7SKP140-201ENST00000411196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.86□□□□□ -0.83
RN7SKP140-201ENST00000411196 ZFP91Q96JP5 570 aaPredicted RBP9.86□□□□□ -0.83
RN7SKP140-201ENST00000411196 PKD2Q13563 968 aa9.84□□□□□ -0.83
RN7SKP140-201ENST00000411196 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.83□□□□□ -0.84
RN7SKP140-201ENST00000411196 ST18O60284 1047 aa9.82□□□□□ -0.84
RN7SKP140-201ENST00000411196 VGFO15240 615 aaPredicted RBP9.8□□□□□ -0.84
RN7SKP140-201ENST00000411196 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
RN7SKP140-201ENST00000411196 MS4A4AQ96JQ5 239 aa9.8□□□□□ -0.84
RN7SKP140-201ENST00000411196 RGL2O15211 777 aa9.77□□□□□ -0.85
RN7SKP140-201ENST00000411196 C3orf67Q6ZVT6 689 aa9.77□□□□□ -0.85
RN7SKP140-201ENST00000411196 BOLA1Q9Y3E2 137 aa9.77□□□□□ -0.85
RN7SKP140-201ENST00000411196 TMEM121BQ9BXQ6 578 aaPredicted RBP9.76□□□□□ -0.85
RN7SKP140-201ENST00000411196 PHF8Q9UPP1 1060 aa9.76□□□□□ -0.85
RN7SKP140-201ENST00000411196 ECM2O94769 699 aaPredicted RBP9.75□□□□□ -0.85
RN7SKP140-201ENST00000411196 PLSCR2Q9NRY7 297 aa9.74□□□□□ -0.85
RN7SKP140-201ENST00000411196 BCL11BQ9C0K0 894 aaPredicted RBP9.73□□□□□ -0.85
RN7SKP140-201ENST00000411196 TMEM92Q6UXU6 159 aa9.72□□□□□ -0.85
RN7SKP140-201ENST00000411196 SOX12O15370 315 aa9.71□□□□□ -0.86
RN7SKP140-201ENST00000411196 FBXO22Q8NEZ5 403 aa9.71□□□□□ -0.86
RN7SKP140-201ENST00000411196 MICALL2Q8IY33 904 aa9.7□□□□□ -0.86
RN7SKP140-201ENST00000411196 MARVELD3Q96A59 401 aa9.69□□□□□ -0.86
RN7SKP140-201ENST00000411196 MFRPQ9BY79 579 aa9.69□□□□□ -0.86
RN7SKP140-201ENST00000411196 HOXB3P14651 431 aaPredicted RBP9.68□□□□□ -0.86
RN7SKP140-201ENST00000411196 PCDH10Q9P2E7 1040 aa9.68□□□□□ -0.86
RN7SKP140-201ENST00000411196 STK24Q9Y6E0 443 aa9.68□□□□□ -0.86
RN7SKP140-201ENST00000411196 STK25O00506 426 aa9.66□□□□□ -0.86
RN7SKP140-201ENST00000411196 SNPHO15079 494 aa9.66□□□□□ -0.86
RN7SKP140-201ENST00000411196 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
RN7SKP140-201ENST00000411196 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
RN7SKP140-201ENST00000411196 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
RN7SKP140-201ENST00000411196 G3V3G9 751 aa9.63□□□□□ -0.87
RN7SKP140-201ENST00000411196 NLRP6P59044 892 aa9.61□□□□□ -0.87
RN7SKP140-201ENST00000411196 TAOK2Q9UL54 1235 aa9.59□□□□□ -0.87
RN7SKP140-201ENST00000411196 EMP3P54852 163 aa9.56□□□□□ -0.88
RN7SKP140-201ENST00000411196 PPP1R37O75864 691 aa9.55□□□□□ -0.88
RN7SKP140-201ENST00000411196 HS3ST6Q96QI5 342 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms