RNA–Protein interactions for RNA: ENST00000410694.1

RNU2-48P-201, Transcript of RNA, U2 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU2-48P, Length 191 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-48P-201ENST00000410694 TRIM41Q8WV44 630 aa4.69□□□□□ -1.66
RNU2-48P-201ENST00000410694 SPDYE1Q8NFV5 336 aaPredicted RBP4.68□□□□□ -1.66
RNU2-48P-201ENST00000410694 FAM212AQ96EL1 285 aa4.67□□□□□ -1.66
RNU2-48P-201ENST00000410694 STK25O00506 426 aa4.66□□□□□ -1.66
RNU2-48P-201ENST00000410694 RBM42Q9BTD8 480 aaKnown RBP4.65□□□□□ -1.67
RNU2-48P-201ENST00000410694 RIOK3O14730 519 aaKnown RBP4.64□□□□□ -1.67
RNU2-48P-201ENST00000410694 HS6ST3Q8IZP7 471 aa4.63□□□□□ -1.67
RNU2-48P-201ENST00000410694 STK24Q9Y6E0 443 aa4.63□□□□□ -1.67
RNU2-48P-201ENST00000410694 PYGBP11216 843 aa4.62□□□□□ -1.67
RNU2-48P-201ENST00000410694 NUBP1P53384 320 aa4.61□□□□□ -1.67
RNU2-48P-201ENST00000410694 AKT1S1Q96B36 256 aa4.61□□□□□ -1.67
RNU2-48P-201ENST00000410694 VGFO15240 615 aaPredicted RBP4.6□□□□□ -1.67
RNU2-48P-201ENST00000410694 REM2Q8IYK8 340 aaPredicted RBP4.59□□□□□ -1.67
RNU2-48P-201ENST00000410694 RNF25Q96BH1 459 aaPredicted RBP4.59□□□□□ -1.67
RNU2-48P-201ENST00000410694 BCL11BQ9C0K0 894 aaPredicted RBP4.59□□□□□ -1.67
RNU2-48P-201ENST00000410694 TSPYL2Q9H2G4 693 aaPredicted RBP4.59□□□□□ -1.67
RNU2-48P-201ENST00000410694 WDR70Q9NW82 654 aa4.59□□□□□ -1.67
RNU2-48P-201ENST00000410694 CREBZFQ9NS37 354 aa4.58□□□□□ -1.68
RNU2-48P-201ENST00000410694 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.57□□□□□ -1.68
RNU2-48P-201ENST00000410694 RASEFQ8IZ41 740 aa4.57□□□□□ -1.68
RNU2-48P-201ENST00000410694 ZFP91Q96JP5 570 aaPredicted RBP4.57□□□□□ -1.68
RNU2-48P-201ENST00000410694 RYDENQ9NUL5 291 aaKnown RBP4.57□□□□□ -1.68
RNU2-48P-201ENST00000410694 GTPBP6O43824 516 aaPredicted RBP4.55□□□□□ -1.68
RNU2-48P-201ENST00000410694 NKX1-1Q15270 411 aaPredicted RBP4.55□□□□□ -1.68
RNU2-48P-201ENST00000410694 CHADLQ6NUI6 762 aa4.54□□□□□ -1.68
RNU2-48P-201ENST00000410694 PITPNM1O00562 1244 aa4.52□□□□□ -1.69
RNU2-48P-201ENST00000410694 CHRM1P11229 460 aaPredicted RBP4.52□□□□□ -1.69
RNU2-48P-201ENST00000410694 PAK3O75914 559 aaPredicted RBP4.51□□□□□ -1.69
RNU2-48P-201ENST00000410694 ZNF467Q7Z7K2 595 aaPredicted RBP4.51□□□□□ -1.69
RNU2-48P-201ENST00000410694 TULP1O00294 542 aaPredicted RBP4.5□□□□□ -1.69
RNU2-48P-201ENST00000410694 MNX1P50219 401 aaPredicted RBP4.5□□□□□ -1.69
RNU2-48P-201ENST00000410694 PCDHB8Q9UN66 801 aa4.5□□□□□ -1.69
RNU2-48P-201ENST00000410694 PCDHB13Q9Y5F0 798 aa4.5□□□□□ -1.69
RNU2-48P-201ENST00000410694 P3H3Q8IVL6 736 aa4.49□□□□□ -1.69
RNU2-48P-201ENST00000410694 DNAJC5Q9H3Z4 198 aa4.49□□□□□ -1.69
RNU2-48P-201ENST00000410694 PDAP1Q13442 181 aaKnown RBP4.48□□□□□ -1.69
RNU2-48P-201ENST00000410694 PRKAR2AP13861 404 aaKnown RBP4.47□□□□□ -1.69
RNU2-48P-201ENST00000410694 FARP1Q9Y4F1 1045 aaPredicted RBP4.47□□□□□ -1.69
RNU2-48P-201ENST00000410694 PSEN1P49768 467 aa4.46□□□□□ -1.7
RNU2-48P-201ENST00000410694 GOLGA2Q08379 1002 aa4.46□□□□□ -1.7
RNU2-48P-201ENST00000410694 SGIP1Q9BQI5 828 aa4.46□□□□□ -1.7
RNU2-48P-201ENST00000410694 CABP2Q9NPB3 220 aa4.45□□□□□ -1.7
RNU2-48P-201ENST00000410694 GTF3C3Q9Y5Q9 886 aa4.43□□□□□ -1.7
RNU2-48P-201ENST00000410694 LMOD2Q6P5Q4 547 aa4.42□□□□□ -1.7
RNU2-48P-201ENST00000410694 CADPS2Q86UW7 1296 aa4.42□□□□□ -1.7
RNU2-48P-201ENST00000410694 EFCAB3Q8N7B9 438 aa4.42□□□□□ -1.7
RNU2-48P-201ENST00000410694 NLRP6P59044 892 aa4.41□□□□□ -1.7
RNU2-48P-201ENST00000410694 ZNF579Q8NAF0 562 aaKnown RBP4.41□□□□□ -1.7
RNU2-48P-201ENST00000410694 KCNV2Q8TDN2 545 aa4.41□□□□□ -1.7
RNU2-48P-201ENST00000410694 MAP3K13O43283 966 aa4.4□□□□□ -1.71
RNU2-48P-201ENST00000410694 IFNL1Q8IU54 200 aa4.4□□□□□ -1.71
RNU2-48P-201ENST00000410694 MFRPQ9BY79 579 aa4.4□□□□□ -1.71
RNU2-48P-201ENST00000410694 ZRANB1Q9UGI0 708 aa4.4□□□□□ -1.71
RNU2-48P-201ENST00000410694 E2F4Q16254 413 aa4.39□□□□□ -1.71
RNU2-48P-201ENST00000410694 LARP6Q9BRS8 491 aaKnown RBP4.39□□□□□ -1.71
RNU2-48P-201ENST00000410694 PHF8Q9UPP1 1060 aa4.39□□□□□ -1.71
RNU2-48P-201ENST00000410694 CCDC61Q9Y6R9 512 aa4.39□□□□□ -1.71
RNU2-48P-201ENST00000410694 SOX12O15370 315 aa4.38□□□□□ -1.71
RNU2-48P-201ENST00000410694 PPP1R37O75864 691 aa4.38□□□□□ -1.71
RNU2-48P-201ENST00000410694 MKRN3Q13064 507 aaKnown RBP4.38□□□□□ -1.71
RNU2-48P-201ENST00000410694 SMYD5Q6GMV2 418 aa4.38□□□□□ -1.71
RNU2-48P-201ENST00000410694 PDE4AP27815 886 aa4.37□□□□□ -1.71
RNU2-48P-201ENST00000410694 NEUROD2Q15784 382 aa4.37□□□□□ -1.71
RNU2-48P-201ENST00000410694 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU2-48P-201ENST00000410694 SEMA3EO15041 775 aa4.36□□□□□ -1.71
RNU2-48P-201ENST00000410694 CD44P16070 742 aaKnown RBP4.36□□□□□ -1.71
RNU2-48P-201ENST00000410694 C14orf37Q86TY3 774 aa4.36□□□□□ -1.71
RNU2-48P-201ENST00000410694 KRI1Q8N9T8 703 aaKnown RBP4.36□□□□□ -1.71
RNU2-48P-201ENST00000410694 ARHGEF1Q92888 912 aaKnown RBP4.36□□□□□ -1.71
RNU2-48P-201ENST00000410694 TMEM132AQ24JP5 1023 aa4.35□□□□□ -1.71
RNU2-48P-201ENST00000410694 ERICH6Q7L0X2 663 aa4.35□□□□□ -1.71
RNU2-48P-201ENST00000410694 KIF12Q96FN5 646 aa4.35□□□□□ -1.71
RNU2-48P-201ENST00000410694 PHF12Q96QT6 1004 aa4.35□□□□□ -1.71
RNU2-48P-201ENST00000410694 TMEM106CQ9BVX2 250 aa4.35□□□□□ -1.71
RNU2-48P-201ENST00000410694 TIMELESSQ9UNS1 1208 aa4.35□□□□□ -1.71
RNU2-48P-201ENST00000410694 CHRDL2Q6WN34 429 aa4.34□□□□□ -1.71
RNU2-48P-201ENST00000410694 FXR2P51116 673 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU2-48P-201ENST00000410694 DDX27Q96GQ7 796 aaKnown RBP4.33□□□□□ -1.72
RNU2-48P-201ENST00000410694 SLC24A3Q9HC58 644 aa4.33□□□□□ -1.72
RNU2-48P-201ENST00000410694 G3V3G9 751 aa4.32□□□□□ -1.72
RNU2-48P-201ENST00000410694 PIP4P2Q8N4L2 257 aa4.32□□□□□ -1.72
RNU2-48P-201ENST00000410694 ZC3H15Q8WU90 426 aaKnown RBP4.32□□□□□ -1.72
RNU2-48P-201ENST00000410694 FBXO22Q8NEZ5 403 aa4.31□□□□□ -1.72
RNU2-48P-201ENST00000410694 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNU2-48P-201ENST00000410694 NCKAP5LQ9HCH0 1330 aa4.28□□□□□ -1.72
RNU2-48P-201ENST00000410694 TESPA1A2RU30 521 aaPredicted RBP4.28□□□□□ -1.72
RNU2-48P-201ENST00000410694 BRPF1P55201 1214 aaPredicted RBP4.28□□□□□ -1.72
RNU2-48P-201ENST00000410694 TMC2Q8TDI7 906 aa4.28□□□□□ -1.72
RNU2-48P-201ENST00000410694 RBM26Q5T8P6 1007 aaKnown RBP4.27□□□□□ -1.73
RNU2-48P-201ENST00000410694 GPIHBP1Q8IV16 184 aa4.27□□□□□ -1.73
RNU2-48P-201ENST00000410694 MS4A3Q96HJ5 214 aa4.27□□□□□ -1.73
RNU2-48P-201ENST00000410694 PPP1R15BQ5SWA1 713 aa4.26□□□□□ -1.73
RNU2-48P-201ENST00000410694 MS4A4AQ96JQ5 239 aa4.26□□□□□ -1.73
RNU2-48P-201ENST00000410694 ATP1B4Q9UN42 357 aaPredicted RBP4.26□□□□□ -1.73
RNU2-48P-201ENST00000410694 GRXCR2A6NFK2 248 aa4.25□□□□□ -1.73
RNU2-48P-201ENST00000410694 DPYSL4O14531 572 aa4.25□□□□□ -1.73
RNU2-48P-201ENST00000410694 MAP3K9P80192 1104 aa4.25□□□□□ -1.73
RNU2-48P-201ENST00000410694 IL27Q8NEV9 243 aa4.25□□□□□ -1.73
RNU2-48P-201ENST00000410694 TRPC6Q9Y210 931 aa4.25□□□□□ -1.73
RNU2-48P-201ENST00000410694 NUTM2FA1L443 756 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms