RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 POTEIP0CG38 1075 aa11.11□□□□□ -0.63
LSM5-205ENST00000409952 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
LSM5-205ENST00000409952 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
LSM5-205ENST00000409952 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
LSM5-205ENST00000409952 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
LSM5-205ENST00000409952 CCDC61Q9Y6R9 512 aa11.08□□□□□ -0.64
LSM5-205ENST00000409952 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
LSM5-205ENST00000409952 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
LSM5-205ENST00000409952 CLCN6P51797 869 aa11.04□□□□□ -0.64
LSM5-205ENST00000409952 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
LSM5-205ENST00000409952 FAM212AQ96EL1 285 aa11.03□□□□□ -0.64
LSM5-205ENST00000409952 GSE1Q14687 1217 aa10.98□□□□□ -0.65
LSM5-205ENST00000409952 KIF12Q96FN5 646 aa10.97□□□□□ -0.65
LSM5-205ENST00000409952 DCAF8Q5TAQ9 597 aa10.96□□□□□ -0.65
LSM5-205ENST00000409952 CHRM1P11229 460 aaPredicted RBP10.94□□□□□ -0.66
LSM5-205ENST00000409952 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
LSM5-205ENST00000409952 SGIP1Q9BQI5 828 aa10.92□□□□□ -0.66
LSM5-205ENST00000409952 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.66
LSM5-205ENST00000409952 MAP3K13O43283 966 aa10.89□□□□□ -0.67
LSM5-205ENST00000409952 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
LSM5-205ENST00000409952 TRPC6Q9Y210 931 aa10.88□□□□□ -0.67
LSM5-205ENST00000409952 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
LSM5-205ENST00000409952 POTEMA6NI47 508 aa10.86□□□□□ -0.67
LSM5-205ENST00000409952 CIZ1Q9ULV3 898 aaPredicted RBP10.86□□□□□ -0.67
LSM5-205ENST00000409952 PYGBP11216 843 aa10.85□□□□□ -0.67
LSM5-205ENST00000409952 PKD2Q13563 968 aa10.83□□□□□ -0.68
LSM5-205ENST00000409952 PCDHB13Q9Y5F0 798 aa10.82□□□□□ -0.68
LSM5-205ENST00000409952 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
LSM5-205ENST00000409952 ATMINO43313 823 aaPredicted RBP10.8□□□□□ -0.68
LSM5-205ENST00000409952 POTEGQ6S5H5 508 aa10.8□□□□□ -0.68
LSM5-205ENST00000409952 ASTLQ6HA08 431 aaPredicted RBP10.78□□□□□ -0.68
LSM5-205ENST00000409952 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
LSM5-205ENST00000409952 OTUD5Q96G74 571 aa10.77□□□□□ -0.69
LSM5-205ENST00000409952 ZNF467Q7Z7K2 595 aaPredicted RBP10.76□□□□□ -0.69
LSM5-205ENST00000409952 PCDH10Q9P2E7 1040 aa10.76□□□□□ -0.69
LSM5-205ENST00000409952 TIE1P35590 1138 aa10.75□□□□□ -0.69
LSM5-205ENST00000409952 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
LSM5-205ENST00000409952 RNF25Q96BH1 459 aaPredicted RBP10.74□□□□□ -0.69
LSM5-205ENST00000409952 BMP2KQ9NSY1 1161 aaPredicted RBP10.74□□□□□ -0.69
LSM5-205ENST00000409952 PCDHB8Q9UN66 801 aa10.73□□□□□ -0.69
LSM5-205ENST00000409952 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
LSM5-205ENST00000409952 ECM2O94769 699 aaPredicted RBP10.69□□□□□ -0.7
LSM5-205ENST00000409952 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
LSM5-205ENST00000409952 RIOK3O14730 519 aaKnown RBP10.67□□□□□ -0.7
LSM5-205ENST00000409952 POTEJP0CG39 1038 aa10.67□□□□□ -0.7
LSM5-205ENST00000409952 PDAP1Q13442 181 aaKnown RBP10.66□□□□□ -0.7
LSM5-205ENST00000409952 RGL2O15211 777 aa10.64□□□□□ -0.71
LSM5-205ENST00000409952 PSEN1P49768 467 aa10.64□□□□□ -0.71
LSM5-205ENST00000409952 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
LSM5-205ENST00000409952 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
LSM5-205ENST00000409952 VGFO15240 615 aaPredicted RBP10.61□□□□□ -0.71
LSM5-205ENST00000409952 C7P10643 843 aa10.6□□□□□ -0.71
LSM5-205ENST00000409952 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
LSM5-205ENST00000409952 TRIM35Q9UPQ4 493 aa10.59□□□□□ -0.71
LSM5-205ENST00000409952 COLQQ9Y215 455 aaPredicted RBP10.59□□□□□ -0.71
LSM5-205ENST00000409952 IER5LQ5T953 404 aa10.57□□□□□ -0.72
LSM5-205ENST00000409952 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.55□□□□□ -0.72
LSM5-205ENST00000409952 ZFP91Q96JP5 570 aaPredicted RBP10.55□□□□□ -0.72
LSM5-205ENST00000409952 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
LSM5-205ENST00000409952 ILDR1Q86SU0 546 aaPredicted RBP10.52□□□□□ -0.73
LSM5-205ENST00000409952 IRX5P78411 483 aaPredicted RBP10.5□□□□□ -0.73
LSM5-205ENST00000409952 CABP2Q9NPB3 220 aa10.47□□□□□ -0.73
LSM5-205ENST00000409952 BCL11BQ9C0K0 894 aaPredicted RBP10.46□□□□□ -0.73
LSM5-205ENST00000409952 MAMSTRQ6ZN01 415 aa10.45□□□□□ -0.74
LSM5-205ENST00000409952 HS6ST3Q8IZP7 471 aa10.45□□□□□ -0.74
LSM5-205ENST00000409952 DNAJC5Q9H3Z4 198 aa10.45□□□□□ -0.74
LSM5-205ENST00000409952 STK25O00506 426 aa10.43□□□□□ -0.74
LSM5-205ENST00000409952 MKRN3Q13064 507 aaKnown RBP10.43□□□□□ -0.74
LSM5-205ENST00000409952 EFCAB3Q8N7B9 438 aa10.43□□□□□ -0.74
LSM5-205ENST00000409952 PDCD7Q8N8D1 485 aaKnown RBP10.43□□□□□ -0.74
LSM5-205ENST00000409952 FAM163AQ96GL9 167 aaPredicted RBP10.43□□□□□ -0.74
LSM5-205ENST00000409952 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
LSM5-205ENST00000409952 SOX12O15370 315 aa10.41□□□□□ -0.74
LSM5-205ENST00000409952 SEC24BO95487 1268 aa10.41□□□□□ -0.74
LSM5-205ENST00000409952 STK24Q9Y6E0 443 aa10.41□□□□□ -0.74
LSM5-205ENST00000409952 GOLGA2Q08379 1002 aa10.4□□□□□ -0.74
LSM5-205ENST00000409952 PLCG2P16885 1265 aa10.38□□□□□ -0.75
LSM5-205ENST00000409952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.38□□□□□ -0.754e-7■□□□□ 10.5
LSM5-205ENST00000409952 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
LSM5-205ENST00000409952 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
LSM5-205ENST00000409952 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
LSM5-205ENST00000409952 FBXO22Q8NEZ5 403 aa10.36□□□□□ -0.75
LSM5-205ENST00000409952 MS4A4AQ96JQ5 239 aa10.34□□□□□ -0.75
LSM5-205ENST00000409952 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
LSM5-205ENST00000409952 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
LSM5-205ENST00000409952 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
LSM5-205ENST00000409952 DPY19L2Q6NUT2 758 aa10.32□□□□□ -0.76
LSM5-205ENST00000409952 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
LSM5-205ENST00000409952 NLRP6P59044 892 aa10.3□□□□□ -0.76
LSM5-205ENST00000409952 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
LSM5-205ENST00000409952 L3MBTL3Q96JM7 780 aaPredicted RBP10.27□□□□□ -0.77
LSM5-205ENST00000409952 CDAN1Q8IWY9 1227 aa10.26□□□□□ -0.77
LSM5-205ENST00000409952 BCANQ96GW7 911 aa10.25□□□□□ -0.77
LSM5-205ENST00000409952 DCAF8L2P0C7V8 631 aa10.23□□□□□ -0.77
LSM5-205ENST00000409952 BOLA1Q9Y3E2 137 aa10.23□□□□□ -0.77
LSM5-205ENST00000409952 HAP1P54257 671 aaPredicted RBP10.21□□□□□ -0.77
LSM5-205ENST00000409952 GTPBP6O43824 516 aaPredicted RBP10.2□□□□□ -0.78
LSM5-205ENST00000409952 SLAIN1Q8ND83 568 aa10.2□□□□□ -0.78
LSM5-205ENST00000409952 BBXQ8WY36 941 aaPredicted RBP10.2□□□□□ -0.78
LSM5-205ENST00000409952 MICALL2Q8IY33 904 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms