RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 UPF2Q9HAU5 1272 aaKnown RBP22.06■■□□□ 1.12
CBX6-202ENST00000407418 RRP7BPQ9NSQ0 103 aa22.05■■□□□ 1.12
CBX6-202ENST00000407418 MYH16Q9H6N6 1097 aa22.03■■□□□ 1.12
CBX6-202ENST00000407418 EEA1Q15075 1411 aa22.03■■□□□ 1.12
CBX6-202ENST00000407418 ANP32AP39687 249 aaKnown RBP22.03■■□□□ 1.12
CBX6-202ENST00000407418 HDGFP51858 240 aaKnown RBP22.01■■□□□ 1.11
CBX6-202ENST00000407418 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.11
CBX6-202ENST00000407418 FAM9BQ8IZU0 186 aa22■■□□□ 1.11
CBX6-202ENST00000407418 GOLGA3Q08378 1498 aa21.99■■□□□ 1.11
CBX6-202ENST00000407418 LMOD2Q6P5Q4 547 aa21.98■■□□□ 1.11
CBX6-202ENST00000407418 CDCA8Q53HL2 280 aa21.97■■□□□ 1.11
CBX6-202ENST00000407418 EIF5BO60841 1220 aaKnown RBP21.97■■□□□ 1.11
CBX6-202ENST00000407418 SALL2Q9Y467 1007 aaPredicted RBP21.96■■□□□ 1.11
CBX6-202ENST00000407418 ARXQ96QS3 562 aa21.96■■□□□ 1.11
CBX6-202ENST00000407418 CFAP53Q96M91 514 aa21.95■■□□□ 1.1
CBX6-202ENST00000407418 POGKQ9P215 609 aa21.94■■□□□ 1.1
CBX6-202ENST00000407418 KANK1Q14678 1352 aa21.94■■□□□ 1.1
CBX6-202ENST00000407418 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
CBX6-202ENST00000407418 RGL3Q3MIN7 710 aa21.93■■□□□ 1.1
CBX6-202ENST00000407418 NPHP1O15259 732 aa21.92■■□□□ 1.1
CBX6-202ENST00000407418 HNRNPUQ00839 825 aaKnown RBP eCLIP21.9■■□□□ 1.1
CBX6-202ENST00000407418 MLECQ14165 292 aa21.89■■□□□ 1.09
CBX6-202ENST00000407418 ANP32BQ92688 251 aaKnown RBP21.89■■□□□ 1.09
CBX6-202ENST00000407418 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
CBX6-202ENST00000407418 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
CBX6-202ENST00000407418 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
CBX6-202ENST00000407418 EIF4G2P78344 907 aaKnown RBP eCLIP21.85■■□□□ 1.09
CBX6-202ENST00000407418 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.09
CBX6-202ENST00000407418 PPM1GO15355 546 aaPredicted RBP21.82■■□□□ 1.08
CBX6-202ENST00000407418 MRS2Q9HD23 443 aa21.8■■□□□ 1.08
CBX6-202ENST00000407418 CDK11BP21127 795 aaKnown RBP21.79■■□□□ 1.08
CBX6-202ENST00000407418 GLIPR1L2Q4G1C9 344 aa21.79■■□□□ 1.08
CBX6-202ENST00000407418 CARMIL2Q6F5E8 1435 aa21.79■■□□□ 1.08
CBX6-202ENST00000407418 CEP164Q9UPV0 1460 aa21.78■■□□□ 1.08
CBX6-202ENST00000407418 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
CBX6-202ENST00000407418 KNSTRNQ9Y448 316 aa21.78■■□□□ 1.08
CBX6-202ENST00000407418 NUDCQ9Y266 331 aa21.72■■□□□ 1.07
CBX6-202ENST00000407418 MAPK8IP3Q9UPT6 1336 aa21.71■■□□□ 1.07
CBX6-202ENST00000407418 CUX2O14529 1486 aa21.71■■□□□ 1.07
CBX6-202ENST00000407418 FKBP8Q14318 412 aa21.7■■□□□ 1.06
CBX6-202ENST00000407418 CARD11Q9BXL7 1154 aa21.69■■□□□ 1.06
CBX6-202ENST00000407418 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
CBX6-202ENST00000407418 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
CBX6-202ENST00000407418 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
CBX6-202ENST00000407418 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
CBX6-202ENST00000407418 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.05
CBX6-202ENST00000407418 PNNQ9H307 717 aaKnown RBP21.64■■□□□ 1.05
CBX6-202ENST00000407418 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
CBX6-202ENST00000407418 GGT6Q6P531 493 aa21.6■■□□□ 1.05
CBX6-202ENST00000407418 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
CBX6-202ENST00000407418 NBR1Q14596 966 aa21.57■■□□□ 1.04
CBX6-202ENST00000407418 CASC1Q6TDU7 716 aa21.57■■□□□ 1.04
CBX6-202ENST00000407418 GOLGA2Q08379 1002 aa21.55■■□□□ 1.04
CBX6-202ENST00000407418 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
CBX6-202ENST00000407418 SRPK2P78362 688 aaKnown RBP21.54■■□□□ 1.04
CBX6-202ENST00000407418 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
CBX6-202ENST00000407418 SOGA1O94964 1423 aa21.54■■□□□ 1.04
CBX6-202ENST00000407418 FTSJ3Q8IY81 847 aaKnown RBP21.52■■□□□ 1.04
CBX6-202ENST00000407418 EFCAB2Q5VUJ9 269 aa21.51■■□□□ 1.03
CBX6-202ENST00000407418 HIRIP3Q9BW71 556 aaPredicted RBP21.5■■□□□ 1.03
CBX6-202ENST00000407418 EID1Q9Y6B2 187 aa21.49■■□□□ 1.03
CBX6-202ENST00000407418 TMF1P82094 1093 aa21.48■■□□□ 1.03
CBX6-202ENST00000407418 CHMP4BQ9H444 224 aaKnown RBP21.48■■□□□ 1.03
CBX6-202ENST00000407418 CCDC9Q9Y3X0 531 aaKnown RBP21.47■■□□□ 1.03
CBX6-202ENST00000407418 NCLP19338 710 aaKnown RBP21.47■■□□□ 1.03
CBX6-202ENST00000407418 U2SURPO15042 1029 aaKnown RBP21.47■■□□□ 1.03
CBX6-202ENST00000407418 OS9Q13438 667 aaPredicted RBP21.47■■□□□ 1.03
CBX6-202ENST00000407418 CSB-PGBD3P0DP91 1061 aa21.46■■□□□ 1.03
CBX6-202ENST00000407418 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
CBX6-202ENST00000407418 SOX12O15370 315 aa21.45■■□□□ 1.02
CBX6-202ENST00000407418 HDGFL2Q7Z4V5 671 aaPredicted RBP21.44■■□□□ 1.02
CBX6-202ENST00000407418 PAK3O75914 559 aaPredicted RBP21.44■■□□□ 1.02
CBX6-202ENST00000407418 TMX4Q9H1E5 349 aaPredicted RBP21.43■■□□□ 1.02
CBX6-202ENST00000407418 NEUROD2Q15784 382 aa21.43■■□□□ 1.02
CBX6-202ENST00000407418 DCAF11Q8TEB1 546 aa21.41■■□□□ 1.02
CBX6-202ENST00000407418 STK26Q9P289 416 aa21.4■■□□□ 1.02
CBX6-202ENST00000407418 SAFB2Q14151 953 aaKnown RBP eCLIP21.39■■□□□ 1.02
CBX6-202ENST00000407418 RTF1Q92541 710 aaKnown RBP21.39■■□□□ 1.01
CBX6-202ENST00000407418 ZRSR1Q15695 479 aaKnown RBP21.37■■□□□ 1.01
CBX6-202ENST00000407418 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
CBX6-202ENST00000407418 MS4A1P11836 297 aa21.37■■□□□ 1.01
CBX6-202ENST00000407418 TULP1O00294 542 aaPredicted RBP21.37■■□□□ 1.01
CBX6-202ENST00000407418 ARHGAP35Q9NRY4 1499 aa21.37■■□□□ 1.01
CBX6-202ENST00000407418 BECN1Q14457 450 aa21.35■■□□□ 1.01
CBX6-202ENST00000407418 CC2D1BQ5T0F9 858 aaKnown RBP21.35■■□□□ 1.01
CBX6-202ENST00000407418 MORC1Q86VD1 984 aa21.33■■□□□ 1.01
CBX6-202ENST00000407418 FMN1Q68DA7 1419 aa21.31■■□□□ 1
CBX6-202ENST00000407418 OSCARQ8IYS5 282 aa21.29■■□□□ 1
CBX6-202ENST00000407418 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
CBX6-202ENST00000407418 ANKRD30AQ9BXX3 1397 aa21.28■■□□□ 1
CBX6-202ENST00000407418 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
CBX6-202ENST00000407418 GOLGA6L22H0YM25 854 aa21.28■■□□□ 1
CBX6-202ENST00000407418 KIF3BO15066 747 aa21.26■□□□□ 0.99
CBX6-202ENST00000407418 FGD1P98174 961 aa21.26■□□□□ 0.99
CBX6-202ENST00000407418 WASHC2CQ9Y4E1 1318 aa21.25■□□□□ 0.99
CBX6-202ENST00000407418 SPAG9O60271 1321 aaKnown RBP21.25■□□□□ 0.99
CBX6-202ENST00000407418 EIF3AQ14152 1382 aaKnown RBP21.24■□□□□ 0.99
CBX6-202ENST00000407418 DDRGK1Q96HY6 314 aa21.24■□□□□ 0.99
CBX6-202ENST00000407418 KCNJ4P48050 445 aa21.23■□□□□ 0.99
CBX6-202ENST00000407418 CYB5RLQ6IPT4 315 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms