RNA–Protein interactions for RNA: ENST00000400470.3

RAB6A-203, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-203ENST00000400470 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
RAB6A-203ENST00000400470 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
RAB6A-203ENST00000400470 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
RAB6A-203ENST00000400470 DCBLD2Q96PD2 775 aa10.98□□□□□ -0.65
RAB6A-203ENST00000400470 KIF12Q96FN5 646 aa10.97□□□□□ -0.65
RAB6A-203ENST00000400470 MAP3K13O43283 966 aa10.91□□□□□ -0.66
RAB6A-203ENST00000400470 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
RAB6A-203ENST00000400470 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
RAB6A-203ENST00000400470 IFNLR1Q8IU57 520 aaPredicted RBP10.88□□□□□ -0.67
RAB6A-203ENST00000400470 TRPC6Q9Y210 931 aa10.88□□□□□ -0.67
RAB6A-203ENST00000400470 PELP1Q8IZL8 1130 aaKnown RBP10.87□□□□□ -0.67
RAB6A-203ENST00000400470 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
RAB6A-203ENST00000400470 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
RAB6A-203ENST00000400470 LHX8Q68G74 356 aa10.85□□□□□ -0.67
RAB6A-203ENST00000400470 DCAF8Q5TAQ9 597 aa10.84□□□□□ -0.67
RAB6A-203ENST00000400470 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
RAB6A-203ENST00000400470 BMP2KQ9NSY1 1161 aaPredicted RBP10.81□□□□□ -0.68
RAB6A-203ENST00000400470 PCDHB13Q9Y5F0 798 aa10.81□□□□□ -0.68
RAB6A-203ENST00000400470 ATN1P54259 1190 aaPredicted RBP10.79□□□□□ -0.68
RAB6A-203ENST00000400470 IFNL1Q8IU54 200 aa10.79□□□□□ -0.68
RAB6A-203ENST00000400470 PYGBP11216 843 aa10.78□□□□□ -0.68
RAB6A-203ENST00000400470 TIE1P35590 1138 aa10.77□□□□□ -0.69
RAB6A-203ENST00000400470 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
RAB6A-203ENST00000400470 GSE1Q14687 1217 aa10.75□□□□□ -0.69
RAB6A-203ENST00000400470 POTEB2H3BUK9 544 aa10.74□□□□□ -0.69
RAB6A-203ENST00000400470 TTLL13PA6NNM8 815 aa10.73□□□□□ -0.69
RAB6A-203ENST00000400470 METRNQ9UJH8 293 aa10.73□□□□□ -0.69
RAB6A-203ENST00000400470 SLC39A7Q92504 469 aa10.72□□□□□ -0.69
RAB6A-203ENST00000400470 C7P10643 843 aa10.7□□□□□ -0.7
RAB6A-203ENST00000400470 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
RAB6A-203ENST00000400470 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
RAB6A-203ENST00000400470 POTEFA5A3E0 1075 aa10.67□□□□□ -0.7
RAB6A-203ENST00000400470 TMEM106CQ9BVX2 250 aa10.66□□□□□ -0.7
RAB6A-203ENST00000400470 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
RAB6A-203ENST00000400470 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
RAB6A-203ENST00000400470 POTEJP0CG39 1038 aa10.64□□□□□ -0.71
RAB6A-203ENST00000400470 OTUD5Q96G74 571 aa10.63□□□□□ -0.71
RAB6A-203ENST00000400470 COLQQ9Y215 455 aaPredicted RBP10.61□□□□□ -0.71
RAB6A-203ENST00000400470 ZNF467Q7Z7K2 595 aaPredicted RBP10.6□□□□□ -0.71
RAB6A-203ENST00000400470 IER5LQ5T953 404 aa10.58□□□□□ -0.72
RAB6A-203ENST00000400470 SEC24BO95487 1268 aa10.53□□□□□ -0.72
RAB6A-203ENST00000400470 PSEN1P49768 467 aa10.53□□□□□ -0.72
RAB6A-203ENST00000400470 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
RAB6A-203ENST00000400470 TRIM41Q8WV44 630 aa10.51□□□□□ -0.73
RAB6A-203ENST00000400470 PDAP1Q13442 181 aaKnown RBP10.5□□□□□ -0.73
RAB6A-203ENST00000400470 MAMSTRQ6ZN01 415 aa10.47□□□□□ -0.73
RAB6A-203ENST00000400470 PLCG2P16885 1265 aa10.46□□□□□ -0.73
RAB6A-203ENST00000400470 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
RAB6A-203ENST00000400470 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
RAB6A-203ENST00000400470 SCUBE2Q9NQ36 999 aa10.43□□□□□ -0.74
RAB6A-203ENST00000400470 PDCD7Q8N8D1 485 aaKnown RBP10.41□□□□□ -0.74
RAB6A-203ENST00000400470 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
RAB6A-203ENST00000400470 MKRN3Q13064 507 aaKnown RBP10.4□□□□□ -0.74
RAB6A-203ENST00000400470 GOLGA2Q08379 1002 aa10.39□□□□□ -0.75
RAB6A-203ENST00000400470 CABP2Q9NPB3 220 aa10.39□□□□□ -0.75
RAB6A-203ENST00000400470 ILDR1Q86SU0 546 aaPredicted RBP10.38□□□□□ -0.75
RAB6A-203ENST00000400470 PKD2Q13563 968 aa10.37□□□□□ -0.75
RAB6A-203ENST00000400470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.755e-7■□□□□ 10.6
RAB6A-203ENST00000400470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.34□□□□□ -0.75
RAB6A-203ENST00000400470 ZFP91Q96JP5 570 aaPredicted RBP10.34□□□□□ -0.75
RAB6A-203ENST00000400470 VGFO15240 615 aaPredicted RBP10.33□□□□□ -0.76
RAB6A-203ENST00000400470 ECM2O94769 699 aaPredicted RBP10.32□□□□□ -0.76
RAB6A-203ENST00000400470 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
RAB6A-203ENST00000400470 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
RAB6A-203ENST00000400470 LCE2DQ5TA82 110 aaPredicted RBP10.29□□□□□ -0.76
RAB6A-203ENST00000400470 SLAIN1Q8ND83 568 aa10.29□□□□□ -0.76
RAB6A-203ENST00000400470 RGL2O15211 777 aa10.28□□□□□ -0.76
RAB6A-203ENST00000400470 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
RAB6A-203ENST00000400470 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
RAB6A-203ENST00000400470 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.24□□□□□ -0.77
RAB6A-203ENST00000400470 BCL11BQ9C0K0 894 aaPredicted RBP10.23□□□□□ -0.77
RAB6A-203ENST00000400470 SOX12O15370 315 aa10.21□□□□□ -0.77
RAB6A-203ENST00000400470 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.77
RAB6A-203ENST00000400470 POTEMA6NI47 508 aa10.2□□□□□ -0.78
RAB6A-203ENST00000400470 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
RAB6A-203ENST00000400470 TAOK2Q9UL54 1235 aa10.2□□□□□ -0.78
RAB6A-203ENST00000400470 PHF8Q9UPP1 1060 aa10.2□□□□□ -0.78
RAB6A-203ENST00000400470 BOLA1Q9Y3E2 137 aa10.2□□□□□ -0.78
RAB6A-203ENST00000400470 POTEGQ6S5H5 508 aa10.19□□□□□ -0.78
RAB6A-203ENST00000400470 STK24Q9Y6E0 443 aa10.19□□□□□ -0.78
RAB6A-203ENST00000400470 STK25O00506 426 aa10.17□□□□□ -0.78
RAB6A-203ENST00000400470 TMEM121BQ9BXQ6 578 aaPredicted RBP10.17□□□□□ -0.78
RAB6A-203ENST00000400470 FBXO22Q8NEZ5 403 aa10.15□□□□□ -0.78
RAB6A-203ENST00000400470 ST18O60284 1047 aa10.13□□□□□ -0.79
RAB6A-203ENST00000400470 MFRPQ9BY79 579 aa10.13□□□□□ -0.79
RAB6A-203ENST00000400470 G3V3G9 751 aa10.12□□□□□ -0.79
RAB6A-203ENST00000400470 NLRP6P59044 892 aa10.11□□□□□ -0.79
RAB6A-203ENST00000400470 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
RAB6A-203ENST00000400470 SNPHO15079 494 aa10.08□□□□□ -0.8
RAB6A-203ENST00000400470 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
RAB6A-203ENST00000400470 HS6ST3Q8IZP7 471 aa10.04□□□□□ -0.8
RAB6A-203ENST00000400470 HOXB3P14651 431 aaPredicted RBP10.03□□□□□ -0.8
RAB6A-203ENST00000400470 PPP1R37O75864 691 aa9.99□□□□□ -0.81
RAB6A-203ENST00000400470 CHGAP10645 457 aaKnown RBP9.99□□□□□ -0.81
RAB6A-203ENST00000400470 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
RAB6A-203ENST00000400470 PCDH10Q9P2E7 1040 aa9.99□□□□□ -0.81
RAB6A-203ENST00000400470 NKX1-1Q15270 411 aaPredicted RBP9.95□□□□□ -0.82
RAB6A-203ENST00000400470 DNAJC5Q9H3Z4 198 aa9.95□□□□□ -0.82
RAB6A-203ENST00000400470 CDAN1Q8IWY9 1227 aa9.94□□□□□ -0.82
RAB6A-203ENST00000400470 KIF3CO14782 793 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms