RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 NEUROD2Q15784 382 aa6.63□□□□□ -1.35
TTC3-204ENST00000399017 CASC1Q6TDU7 716 aa6.62□□□□□ -1.35
TTC3-204ENST00000399017 PNNQ9H307 717 aaKnown RBP6.62□□□□□ -1.35
TTC3-204ENST00000399017 G3V3G9 751 aa6.61□□□□□ -1.35
TTC3-204ENST00000399017 DCAF8Q5TAQ9 597 aa6.61□□□□□ -1.35
TTC3-204ENST00000399017 TRIM44Q96DX7 344 aaPredicted RBP6.61□□□□□ -1.35
TTC3-204ENST00000399017 CHMP4AQ9BY43 222 aa6.61□□□□□ -1.35
TTC3-204ENST00000399017 NCLP19338 710 aaKnown RBP6.6□□□□□ -1.35
TTC3-204ENST00000399017 WDR43Q15061 677 aaKnown RBP eCLIP6.6□□□□□ -1.35
TTC3-204ENST00000399017 NEUROD1Q13562 356 aa6.59□□□□□ -1.35
TTC3-204ENST00000399017 CDCA8Q53HL2 280 aa6.59□□□□□ -1.35
TTC3-204ENST00000399017 CHMP4BQ9H444 224 aaKnown RBP6.59□□□□□ -1.35
TTC3-204ENST00000399017 CFAP44Q96MT7 982 aa6.59□□□□□ -1.35
TTC3-204ENST00000399017 DIEXFQ68CQ4 756 aaKnown RBP6.59□□□□□ -1.35
TTC3-204ENST00000399017 ANP32AP39687 249 aaKnown RBP6.58□□□□□ -1.36
TTC3-204ENST00000399017 HMGB2P26583 209 aaKnown RBP6.58□□□□□ -1.36
TTC3-204ENST00000399017 LMOD2Q6P5Q4 547 aa6.58□□□□□ -1.36
TTC3-204ENST00000399017 CLSTN1O94985 981 aa6.58□□□□□ -1.36
TTC3-204ENST00000399017 RB1CC1Q8TDY2 1594 aa6.57□□□□□ -1.36
TTC3-204ENST00000399017 NRDCO43847 1150 aa6.56□□□□□ -1.36
TTC3-204ENST00000399017 CCDC180Q9P1Z9 1646 aa6.56□□□□□ -1.36
TTC3-204ENST00000399017 GOLGA6L6A8MZA4 724 aa6.56□□□□□ -1.36
TTC3-204ENST00000399017 KIAA2012Q0VF49 1180 aa6.55□□□□□ -1.36
TTC3-204ENST00000399017 CHAF1AQ13111 956 aaPredicted RBP6.55□□□□□ -1.36
TTC3-204ENST00000399017 CFAP53Q96M91 514 aa6.55□□□□□ -1.36
TTC3-204ENST00000399017 WASHC2AQ641Q2 1341 aa6.54□□□□□ -1.36
TTC3-204ENST00000399017 CNKSR2Q8WXI2 1034 aa6.53□□□□□ -1.36
TTC3-204ENST00000399017 CCDC9Q9Y3X0 531 aaKnown RBP6.53□□□□□ -1.36
TTC3-204ENST00000399017 GLIPR1L2Q4G1C9 344 aa6.53□□□□□ -1.36
TTC3-204ENST00000399017 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.53□□□□□ -1.36
TTC3-204ENST00000399017 GOLGA6L22H0YM25 854 aa6.52□□□□□ -1.37
TTC3-204ENST00000399017 CCDC34Q96HJ3 373 aa6.52□□□□□ -1.37
TTC3-204ENST00000399017 MEX3CQ5U5Q3 659 aaKnown RBP6.51□□□□□ -1.37
TTC3-204ENST00000399017 KANK1Q14678 1352 aa6.51□□□□□ -1.37
TTC3-204ENST00000399017 KLHL34Q8N239 644 aa6.51□□□□□ -1.37
TTC3-204ENST00000399017 TMC1Q8TDI8 760 aa6.51□□□□□ -1.37
TTC3-204ENST00000399017 PPARGC1BQ86YN6 1023 aaKnown RBP6.51□□□□□ -1.37
TTC3-204ENST00000399017 ISY1Q9ULR0 285 aaKnown RBP6.51□□□□□ -1.37
TTC3-204ENST00000399017 FGD1P98174 961 aa6.51□□□□□ -1.37
TTC3-204ENST00000399017 SF3B2Q13435 895 aaKnown RBP6.51□□□□□ -1.37
TTC3-204ENST00000399017 TONSLQ96HA7 1378 aa6.5□□□□□ -1.37
TTC3-204ENST00000399017 PLEKHD1A6NEE1 506 aa6.5□□□□□ -1.37
TTC3-204ENST00000399017 SRPK2P78362 688 aaKnown RBP6.5□□□□□ -1.37
TTC3-204ENST00000399017 HDAC5Q9UQL6 1122 aa6.49□□□□□ -1.37
TTC3-204ENST00000399017 WDR70Q9NW82 654 aa6.49□□□□□ -1.37
TTC3-204ENST00000399017 NUDCQ9Y266 331 aa6.49□□□□□ -1.37
TTC3-204ENST00000399017 CWC22Q9HCG8 908 aaKnown RBP6.48□□□□□ -1.37
TTC3-204ENST00000399017 POGKQ9P215 609 aa6.48□□□□□ -1.37
TTC3-204ENST00000399017 USP35Q9P2H5 1018 aa6.47□□□□□ -1.37
TTC3-204ENST00000399017 ARID3CA6NKF2 412 aa6.47□□□□□ -1.37
TTC3-204ENST00000399017 OS9Q13438 667 aaPredicted RBP6.47□□□□□ -1.37
TTC3-204ENST00000399017 RSF1Q96T23 1441 aaPredicted RBP6.47□□□□□ -1.37
TTC3-204ENST00000399017 EID1Q9Y6B2 187 aa6.46□□□□□ -1.37
TTC3-204ENST00000399017 MS4A1P11836 297 aa6.46□□□□□ -1.38
TTC3-204ENST00000399017 CEP89Q96ST8 783 aa6.46□□□□□ -1.38
TTC3-204ENST00000399017 TCEAL9Q9UHQ7 104 aa6.46□□□□□ -1.38
TTC3-204ENST00000399017 MTUS2Q5JR59 1369 aa6.46□□□□□ -1.38
TTC3-204ENST00000399017 KCNH8Q96L42 1107 aa6.46□□□□□ -1.38
TTC3-204ENST00000399017 KCNJ4P48050 445 aa6.45□□□□□ -1.38
TTC3-204ENST00000399017 BECN1Q14457 450 aa6.45□□□□□ -1.38
TTC3-204ENST00000399017 MAPK8IP3Q9UPT6 1336 aa6.45□□□□□ -1.38
TTC3-204ENST00000399017 P3H3Q8IVL6 736 aa6.45□□□□□ -1.38
TTC3-204ENST00000399017 CLIP1P30622 1438 aa6.45□□□□□ -1.38
TTC3-204ENST00000399017 SCRIBQ14160 1630 aa6.44□□□□□ -1.38
TTC3-204ENST00000399017 GNL2Q13823 731 aaKnown RBP6.44□□□□□ -1.38
TTC3-204ENST00000399017 CTDP1Q9Y5B0 961 aaPredicted RBP6.44□□□□□ -1.38
TTC3-204ENST00000399017 GTF2E1P29083 439 aaPredicted RBP6.44□□□□□ -1.38
TTC3-204ENST00000399017 TNNT2P45379 298 aaPredicted RBP6.44□□□□□ -1.38
TTC3-204ENST00000399017 RTF1Q92541 710 aaKnown RBP6.44□□□□□ -1.38
TTC3-204ENST00000399017 TRIM34Q9BYJ4 488 aa6.43□□□□□ -1.38
TTC3-204ENST00000399017 PPM1GO15355 546 aaPredicted RBP6.43□□□□□ -1.38
TTC3-204ENST00000399017 FTSJ3Q8IY81 847 aaKnown RBP6.43□□□□□ -1.38
TTC3-204ENST00000399017 WDHD1O75717 1129 aaPredicted RBP6.43□□□□□ -1.38
TTC3-204ENST00000399017 DDRGK1Q96HY6 314 aa6.43□□□□□ -1.38
TTC3-204ENST00000399017 AMOTL1Q8IY63 956 aa6.43□□□□□ -1.38
TTC3-204ENST00000399017 PPP4R2Q9NY27 417 aa6.43□□□□□ -1.38
TTC3-204ENST00000399017 WWC2Q6AWC2 1192 aa6.42□□□□□ -1.38
TTC3-204ENST00000399017 MSH5O43196 834 aa6.42□□□□□ -1.38
TTC3-204ENST00000399017 KNSTRNQ9Y448 316 aa6.41□□□□□ -1.38
TTC3-204ENST00000399017 NOC3LQ8WTT2 800 aaKnown RBP6.41□□□□□ -1.38
TTC3-204ENST00000399017 EVA1CP58658 441 aa6.41□□□□□ -1.38
TTC3-204ENST00000399017 MCCP23508 829 aa6.41□□□□□ -1.38
TTC3-204ENST00000399017 ZNF710Q8N1W2 664 aa6.4□□□□□ -1.38
TTC3-204ENST00000399017 CSB-PGBD3P0DP91 1061 aa6.4□□□□□ -1.38
TTC3-204ENST00000399017 TAF7LQ5H9L4 462 aa6.4□□□□□ -1.38
TTC3-204ENST00000399017 CCAR1Q8IX12 1150 aaKnown RBP6.4□□□□□ -1.38
TTC3-204ENST00000399017 FRAT2O75474 233 aaPredicted RBP6.4□□□□□ -1.39
TTC3-204ENST00000399017 CALD1Q05682 793 aaKnown RBP6.4□□□□□ -1.39
TTC3-204ENST00000399017 NOL10Q9BSC4 688 aaKnown RBP6.39□□□□□ -1.39
TTC3-204ENST00000399017 LRRFIP1Q32MZ4 808 aaKnown RBP6.39□□□□□ -1.39
TTC3-204ENST00000399017 NAP1L2Q9ULW6 460 aaPredicted RBP6.39□□□□□ -1.39
TTC3-204ENST00000399017 GOLGA6L4A6NEF3 574 aa6.38□□□□□ -1.39
TTC3-204ENST00000399017 CHMP4CQ96CF2 233 aa6.38□□□□□ -1.39
TTC3-204ENST00000399017 SPAG9O60271 1321 aaKnown RBP6.38□□□□□ -1.39
TTC3-204ENST00000399017 GPATCH3Q96I76 525 aa6.38□□□□□ -1.39
TTC3-204ENST00000399017 PAK3O75914 559 aaPredicted RBP6.38□□□□□ -1.39
TTC3-204ENST00000399017 HTATSF1O43719 755 aaKnown RBP6.38□□□□□ -1.39
TTC3-204ENST00000399017 PPP1R1BQ9UD71 204 aaPredicted RBP6.37□□□□□ -1.39
TTC3-204ENST00000399017 GORABQ5T7V8 394 aa6.37□□□□□ -1.39
TTC3-204ENST00000399017 KDM2AQ9Y2K7 1162 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms