RNA–Protein interactions for RNA: ENST00000398263.6

TGOLN2-203, Transcript of trans-golgi network protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TGOLN2, Length 6,138 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGOLN2-203ENST00000398263 CLIP1P30622 1438 aa20.21■□□□□ 0.83
TGOLN2-203ENST00000398263 PLEKHG5O94827 1062 aa20.17■□□□□ 0.82
TGOLN2-203ENST00000398263 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
TGOLN2-203ENST00000398263 EEA1Q15075 1411 aa20.17■□□□□ 0.82
TGOLN2-203ENST00000398263 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
TGOLN2-203ENST00000398263 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
TGOLN2-203ENST00000398263 CFDP1Q9UEE9 299 aaPredicted RBP20.15■□□□□ 0.82
TGOLN2-203ENST00000398263 CDCA8Q53HL2 280 aa20.14■□□□□ 0.81
TGOLN2-203ENST00000398263 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
TGOLN2-203ENST00000398263 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
TGOLN2-203ENST00000398263 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
TGOLN2-203ENST00000398263 CFAP53Q96M91 514 aa20.1■□□□□ 0.81
TGOLN2-203ENST00000398263 EIF4G2P78344 907 aaKnown RBP eCLIP20.09■□□□□ 0.81
TGOLN2-203ENST00000398263 GOLGA3Q08378 1498 aa20.09■□□□□ 0.81
TGOLN2-203ENST00000398263 MRS2Q9HD23 443 aa20.08■□□□□ 0.8
TGOLN2-203ENST00000398263 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
TGOLN2-203ENST00000398263 RGL3Q3MIN7 710 aa20.04■□□□□ 0.8
TGOLN2-203ENST00000398263 HDGFP51858 240 aaKnown RBP20.03■□□□□ 0.8
TGOLN2-203ENST00000398263 FKBP8Q14318 412 aa20.02■□□□□ 0.8
TGOLN2-203ENST00000398263 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.8
TGOLN2-203ENST00000398263 POGKQ9P215 609 aa20■□□□□ 0.79
TGOLN2-203ENST00000398263 CCDC136Q96JN2 1154 aa20■□□□□ 0.79
TGOLN2-203ENST00000398263 CDK11BP21127 795 aaKnown RBP20■□□□□ 0.79
TGOLN2-203ENST00000398263 ARXQ96QS3 562 aa19.99■□□□□ 0.79
TGOLN2-203ENST00000398263 LMOD2Q6P5Q4 547 aa19.97■□□□□ 0.79
TGOLN2-203ENST00000398263 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
TGOLN2-203ENST00000398263 KANK1Q14678 1352 aa19.96■□□□□ 0.79
TGOLN2-203ENST00000398263 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
TGOLN2-203ENST00000398263 NPHP1O15259 732 aa19.91■□□□□ 0.78
TGOLN2-203ENST00000398263 NUDCQ9Y266 331 aa19.91■□□□□ 0.78
TGOLN2-203ENST00000398263 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
TGOLN2-203ENST00000398263 CCNB3Q8WWL7 1395 aa19.9■□□□□ 0.78
TGOLN2-203ENST00000398263 CARD11Q9BXL7 1154 aa19.88■□□□□ 0.77
TGOLN2-203ENST00000398263 MAPK8IP3Q9UPT6 1336 aa19.88■□□□□ 0.77
TGOLN2-203ENST00000398263 CEP162Q5TB80 1403 aa19.86■□□□□ 0.77
TGOLN2-203ENST00000398263 EIF5BO60841 1220 aaKnown RBP19.85■□□□□ 0.77
TGOLN2-203ENST00000398263 BAZ1AQ9NRL2 1556 aaPredicted RBP19.85■□□□□ 0.77
TGOLN2-203ENST00000398263 EIF4G1Q04637 1599 aaKnown RBP19.84■□□□□ 0.77
TGOLN2-203ENST00000398263 PNNQ9H307 717 aaKnown RBP19.82■□□□□ 0.76
TGOLN2-203ENST00000398263 MLECQ14165 292 aa19.82■□□□□ 0.76
TGOLN2-203ENST00000398263 CASC1Q6TDU7 716 aa19.81■□□□□ 0.76
TGOLN2-203ENST00000398263 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
TGOLN2-203ENST00000398263 NCLP19338 710 aaKnown RBP19.79■□□□□ 0.76
TGOLN2-203ENST00000398263 CARMIL2Q6F5E8 1435 aa19.77■□□□□ 0.76
TGOLN2-203ENST00000398263 TNIKQ9UKE5 1360 aa19.76■□□□□ 0.75
TGOLN2-203ENST00000398263 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
TGOLN2-203ENST00000398263 HIRIP3Q9BW71 556 aaPredicted RBP19.76■□□□□ 0.75
TGOLN2-203ENST00000398263 FTSJ3Q8IY81 847 aaKnown RBP19.76■□□□□ 0.75
TGOLN2-203ENST00000398263 CHMP4BQ9H444 224 aaKnown RBP19.75■□□□□ 0.75
TGOLN2-203ENST00000398263 LAS1LQ9Y4W2 734 aaKnown RBP19.74■□□□□ 0.75
TGOLN2-203ENST00000398263 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
TGOLN2-203ENST00000398263 BECN1Q14457 450 aa19.73■□□□□ 0.75
TGOLN2-203ENST00000398263 CUX2O14529 1486 aa19.72■□□□□ 0.75
TGOLN2-203ENST00000398263 TMF1P82094 1093 aa19.68■□□□□ 0.74
TGOLN2-203ENST00000398263 GOLGA2Q08379 1002 aa19.67■□□□□ 0.74
TGOLN2-203ENST00000398263 ZRSR1Q15695 479 aaKnown RBP19.67■□□□□ 0.74
TGOLN2-203ENST00000398263 MS4A1P11836 297 aa19.67■□□□□ 0.74
TGOLN2-203ENST00000398263 GOLGA6L22H0YM25 854 aa19.66■□□□□ 0.74
TGOLN2-203ENST00000398263 DDRGK1Q96HY6 314 aa19.65■□□□□ 0.74
TGOLN2-203ENST00000398263 SRPK2P78362 688 aaKnown RBP19.65■□□□□ 0.74
TGOLN2-203ENST00000398263 NEUROD2Q15784 382 aa19.64■□□□□ 0.74
TGOLN2-203ENST00000398263 OS9Q13438 667 aaPredicted RBP19.64■□□□□ 0.73
TGOLN2-203ENST00000398263 U2SURPO15042 1029 aaKnown RBP19.64■□□□□ 0.73
TGOLN2-203ENST00000398263 GGT6Q6P531 493 aa19.64■□□□□ 0.73
TGOLN2-203ENST00000398263 TNNT2P45379 298 aaPredicted RBP19.61■□□□□ 0.73
TGOLN2-203ENST00000398263 SMARCA2P51531 1590 aa19.6■□□□□ 0.73
TGOLN2-203ENST00000398263 DCAF11Q8TEB1 546 aa19.59■□□□□ 0.73
TGOLN2-203ENST00000398263 ANP32EQ9BTT0 268 aa19.59■□□□□ 0.73
TGOLN2-203ENST00000398263 EFCAB2Q5VUJ9 269 aa19.59■□□□□ 0.73
TGOLN2-203ENST00000398263 HDGFL2Q7Z4V5 671 aaPredicted RBP19.58■□□□□ 0.72
TGOLN2-203ENST00000398263 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
TGOLN2-203ENST00000398263 CC2D1BQ5T0F9 858 aaKnown RBP19.55■□□□□ 0.72
TGOLN2-203ENST00000398263 RTF1Q92541 710 aaKnown RBP19.54■□□□□ 0.72
TGOLN2-203ENST00000398263 SOGA1O94964 1423 aa19.54■□□□□ 0.72
TGOLN2-203ENST00000398263 SOX12O15370 315 aa19.53■□□□□ 0.72
TGOLN2-203ENST00000398263 MORC1Q86VD1 984 aa19.53■□□□□ 0.72
TGOLN2-203ENST00000398263 MIER1Q8N108 512 aa19.51■□□□□ 0.71
TGOLN2-203ENST00000398263 CSB-PGBD3P0DP91 1061 aa19.51■□□□□ 0.71
TGOLN2-203ENST00000398263 EID1Q9Y6B2 187 aa19.51■□□□□ 0.71
TGOLN2-203ENST00000398263 FGD1P98174 961 aa19.51■□□□□ 0.71
TGOLN2-203ENST00000398263 TULP1O00294 542 aaPredicted RBP19.5■□□□□ 0.71
TGOLN2-203ENST00000398263 FRAT1Q92837 279 aaPredicted RBP19.49■□□□□ 0.71
TGOLN2-203ENST00000398263 ARHGAP35Q9NRY4 1499 aa19.49■□□□□ 0.71
TGOLN2-203ENST00000398263 SAFB2Q14151 953 aaKnown RBP eCLIP19.49■□□□□ 0.71
TGOLN2-203ENST00000398263 PAK3O75914 559 aaPredicted RBP19.49■□□□□ 0.71
TGOLN2-203ENST00000398263 STK26Q9P289 416 aa19.49■□□□□ 0.71
TGOLN2-203ENST00000398263 TMX4Q9H1E5 349 aaPredicted RBP19.48■□□□□ 0.71
TGOLN2-203ENST00000398263 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
TGOLN2-203ENST00000398263 KCNJ4P48050 445 aa19.48■□□□□ 0.71
TGOLN2-203ENST00000398263 NBR1Q14596 966 aa19.45■□□□□ 0.7
TGOLN2-203ENST00000398263 CHMP4AQ9BY43 222 aa19.44■□□□□ 0.7
TGOLN2-203ENST00000398263 SIN3AQ96ST3 1273 aa19.44■□□□□ 0.7
TGOLN2-203ENST00000398263 FMN1Q68DA7 1419 aa19.44■□□□□ 0.7
TGOLN2-203ENST00000398263 CCDC9Q9Y3X0 531 aaKnown RBP19.43■□□□□ 0.7
TGOLN2-203ENST00000398263 TIMELESSQ9UNS1 1208 aa19.43■□□□□ 0.7
TGOLN2-203ENST00000398263 ANKRD30AQ9BXX3 1397 aa19.42■□□□□ 0.7
TGOLN2-203ENST00000398263 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
TGOLN2-203ENST00000398263 PKD2Q13563 968 aa19.42■□□□□ 0.7
TGOLN2-203ENST00000398263 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
TGOLN2-203ENST00000398263 EIF3AQ14152 1382 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms