RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 LHX8Q68G74 356 aa11.64□□□□□ -0.55
CMC1-202ENST00000396610 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
CMC1-202ENST00000396610 RASEFQ8IZ41 740 aa11.61□□□□□ -0.55
CMC1-202ENST00000396610 DCBLD2Q96PD2 775 aa11.6□□□□□ -0.55
CMC1-202ENST00000396610 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
CMC1-202ENST00000396610 PKD2Q13563 968 aa11.57□□□□□ -0.56
CMC1-202ENST00000396610 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
CMC1-202ENST00000396610 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
CMC1-202ENST00000396610 DCAF8Q5TAQ9 597 aa11.53□□□□□ -0.56
CMC1-202ENST00000396610 GSE1Q14687 1217 aa11.51□□□□□ -0.57
CMC1-202ENST00000396610 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
CMC1-202ENST00000396610 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
CMC1-202ENST00000396610 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
CMC1-202ENST00000396610 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
CMC1-202ENST00000396610 TRIM41Q8WV44 630 aa11.42□□□□□ -0.58
CMC1-202ENST00000396610 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
CMC1-202ENST00000396610 PYGBP11216 843 aa11.4□□□□□ -0.58
CMC1-202ENST00000396610 RGL2O15211 777 aa11.39□□□□□ -0.59
CMC1-202ENST00000396610 RNF25Q96BH1 459 aaPredicted RBP11.35□□□□□ -0.59
CMC1-202ENST00000396610 CHRM1P11229 460 aaPredicted RBP11.33□□□□□ -0.6
CMC1-202ENST00000396610 DCAF8L2P0C7V8 631 aa11.32□□□□□ -0.6
CMC1-202ENST00000396610 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
CMC1-202ENST00000396610 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
CMC1-202ENST00000396610 ASTLQ6HA08 431 aaPredicted RBP11.28□□□□□ -0.6
CMC1-202ENST00000396610 RIOK3O14730 519 aaKnown RBP11.27□□□□□ -0.61
CMC1-202ENST00000396610 MAP3K13O43283 966 aa11.27□□□□□ -0.61
CMC1-202ENST00000396610 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
CMC1-202ENST00000396610 ATMINO43313 823 aaPredicted RBP11.24□□□□□ -0.61
CMC1-202ENST00000396610 SLC39A7Q92504 469 aa11.24□□□□□ -0.61
CMC1-202ENST00000396610 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
CMC1-202ENST00000396610 C7P10643 843 aa11.23□□□□□ -0.61
CMC1-202ENST00000396610 ZNF467Q7Z7K2 595 aaPredicted RBP11.23□□□□□ -0.61
CMC1-202ENST00000396610 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
CMC1-202ENST00000396610 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
CMC1-202ENST00000396610 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
CMC1-202ENST00000396610 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
CMC1-202ENST00000396610 OTUD5Q96G74 571 aa11.19□□□□□ -0.62
CMC1-202ENST00000396610 SGIP1Q9BQI5 828 aa11.19□□□□□ -0.62
CMC1-202ENST00000396610 POTEB2H3BUK9 544 aa11.18□□□□□ -0.62
CMC1-202ENST00000396610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.16□□□□□ -0.62
CMC1-202ENST00000396610 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
CMC1-202ENST00000396610 CHGAP10645 457 aaKnown RBP11.14□□□□□ -0.63
CMC1-202ENST00000396610 TIE1P35590 1138 aa11.14□□□□□ -0.63
CMC1-202ENST00000396610 PDAP1Q13442 181 aaKnown RBP11.14□□□□□ -0.63
CMC1-202ENST00000396610 TAOK2Q9UL54 1235 aa11.14□□□□□ -0.63
CMC1-202ENST00000396610 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
CMC1-202ENST00000396610 ATN1P54259 1190 aaPredicted RBP11.13□□□□□ -0.63
CMC1-202ENST00000396610 MAMSTRQ6ZN01 415 aa11.13□□□□□ -0.63
CMC1-202ENST00000396610 STK25O00506 426 aa11.12□□□□□ -0.63
CMC1-202ENST00000396610 PSEN1P49768 467 aa11.12□□□□□ -0.63
CMC1-202ENST00000396610 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
CMC1-202ENST00000396610 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
CMC1-202ENST00000396610 BCL11BQ9C0K0 894 aaPredicted RBP11.1□□□□□ -0.63
CMC1-202ENST00000396610 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
CMC1-202ENST00000396610 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
CMC1-202ENST00000396610 SCUBE2Q9NQ36 999 aa11.04□□□□□ -0.64
CMC1-202ENST00000396610 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
CMC1-202ENST00000396610 POTEJP0CG39 1038 aa11.01□□□□□ -0.65
CMC1-202ENST00000396610 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
CMC1-202ENST00000396610 CABP2Q9NPB3 220 aa11□□□□□ -0.65
CMC1-202ENST00000396610 SEC24BO95487 1268 aa10.99□□□□□ -0.65
CMC1-202ENST00000396610 NKX1-1Q15270 411 aaPredicted RBP10.99□□□□□ -0.65
CMC1-202ENST00000396610 IER5LQ5T953 404 aa10.99□□□□□ -0.65
CMC1-202ENST00000396610 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
CMC1-202ENST00000396610 POTEFA5A3E0 1075 aa10.97□□□□□ -0.65
CMC1-202ENST00000396610 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
CMC1-202ENST00000396610 POTEMA6NI47 508 aa10.95□□□□□ -0.66
CMC1-202ENST00000396610 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.95□□□□□ -0.66
CMC1-202ENST00000396610 EFCAB3Q8N7B9 438 aa10.94□□□□□ -0.66
CMC1-202ENST00000396610 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
CMC1-202ENST00000396610 PLSCR2Q9NRY7 297 aa10.92□□□□□ -0.66
CMC1-202ENST00000396610 GOLGA2Q08379 1002 aa10.91□□□□□ -0.66
CMC1-202ENST00000396610 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
CMC1-202ENST00000396610 PLCB2Q00722 1185 aa10.9□□□□□ -0.66
CMC1-202ENST00000396610 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
CMC1-202ENST00000396610 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
CMC1-202ENST00000396610 MFRPQ9BY79 579 aa10.88□□□□□ -0.67
CMC1-202ENST00000396610 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
CMC1-202ENST00000396610 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
CMC1-202ENST00000396610 PHF8Q9UPP1 1060 aa10.87□□□□□ -0.67
CMC1-202ENST00000396610 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
CMC1-202ENST00000396610 PLCG2P16885 1265 aa10.85□□□□□ -0.67
CMC1-202ENST00000396610 SPRYD3Q8NCJ5 442 aa10.85□□□□□ -0.67
CMC1-202ENST00000396610 SOX12O15370 315 aa10.84□□□□□ -0.67
CMC1-202ENST00000396610 FAM163AQ96GL9 167 aaPredicted RBP10.84□□□□□ -0.67
CMC1-202ENST00000396610 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
CMC1-202ENST00000396610 NLRP6P59044 892 aa10.81□□□□□ -0.68
CMC1-202ENST00000396610 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
CMC1-202ENST00000396610 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
CMC1-202ENST00000396610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.8□□□□□ -0.68
CMC1-202ENST00000396610 IRX5P78411 483 aaPredicted RBP10.79□□□□□ -0.68
CMC1-202ENST00000396610 LCE2DQ5TA82 110 aaPredicted RBP10.77□□□□□ -0.69
CMC1-202ENST00000396610 ILDR1Q86SU0 546 aaPredicted RBP10.77□□□□□ -0.69
CMC1-202ENST00000396610 OCEL1Q9H607 264 aa10.77□□□□□ -0.69
CMC1-202ENST00000396610 PDCD7Q8N8D1 485 aaKnown RBP10.76□□□□□ -0.69
CMC1-202ENST00000396610 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
CMC1-202ENST00000396610 HAP1P54257 671 aaPredicted RBP10.75□□□□□ -0.69
CMC1-202ENST00000396610 PPP1R37O75864 691 aa10.74□□□□□ -0.69
CMC1-202ENST00000396610 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
CMC1-202ENST00000396610 DPY19L2Q6NUT2 758 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms