RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 GSE1Q14687 1217 aa4.22□□□□□ -1.73
SNORD28B-201ENST00000390993 PHF12Q96QT6 1004 aa4.22□□□□□ -1.73
SNORD28B-201ENST00000390993 RASEFQ8IZ41 740 aa4.2□□□□□ -1.74
SNORD28B-201ENST00000390993 SPOCK2Q92563 424 aa4.2□□□□□ -1.74
SNORD28B-201ENST00000390993 CCDC61Q9Y6R9 512 aa4.2□□□□□ -1.74
SNORD28B-201ENST00000390993 GALR2O43603 387 aaPredicted RBP4.19□□□□□ -1.74
SNORD28B-201ENST00000390993 NUBP1P53384 320 aa4.19□□□□□ -1.74
SNORD28B-201ENST00000390993 SGIP1Q9BQI5 828 aa4.19□□□□□ -1.74
SNORD28B-201ENST00000390993 KIF12Q96FN5 646 aa4.18□□□□□ -1.74
SNORD28B-201ENST00000390993 MS4A3Q96HJ5 214 aa4.18□□□□□ -1.74
SNORD28B-201ENST00000390993 PCDHB13Q9Y5F0 798 aa4.18□□□□□ -1.74
SNORD28B-201ENST00000390993 MAP3K13O43283 966 aa4.17□□□□□ -1.74
SNORD28B-201ENST00000390993 CIZ1Q9ULV3 898 aaPredicted RBP4.17□□□□□ -1.74
SNORD28B-201ENST00000390993 TRIM41Q8WV44 630 aa4.16□□□□□ -1.74
SNORD28B-201ENST00000390993 TIE1P35590 1138 aa4.15□□□□□ -1.75
SNORD28B-201ENST00000390993 ZNF467Q7Z7K2 595 aaPredicted RBP4.15□□□□□ -1.75
SNORD28B-201ENST00000390993 SLC39A7Q92504 469 aa4.15□□□□□ -1.75
SNORD28B-201ENST00000390993 C7P10643 843 aa4.14□□□□□ -1.75
SNORD28B-201ENST00000390993 PYGBP11216 843 aa4.14□□□□□ -1.75
SNORD28B-201ENST00000390993 GOLGA2Q08379 1002 aa4.14□□□□□ -1.75
SNORD28B-201ENST00000390993 LHX8Q68G74 356 aa4.14□□□□□ -1.75
SNORD28B-201ENST00000390993 ATMINO43313 823 aaPredicted RBP4.13□□□□□ -1.75
SNORD28B-201ENST00000390993 ASTLQ6HA08 431 aaPredicted RBP4.13□□□□□ -1.75
SNORD28B-201ENST00000390993 IFNLR1Q8IU57 520 aaPredicted RBP4.13□□□□□ -1.75
SNORD28B-201ENST00000390993 SEC24BO95487 1268 aa4.12□□□□□ -1.75
SNORD28B-201ENST00000390993 POTEIP0CG38 1075 aa4.12□□□□□ -1.75
SNORD28B-201ENST00000390993 TAOK2Q9UL54 1235 aa4.12□□□□□ -1.75
SNORD28B-201ENST00000390993 CHRM1P11229 460 aaPredicted RBP4.11□□□□□ -1.75
SNORD28B-201ENST00000390993 IER5LQ5T953 404 aa4.11□□□□□ -1.75
SNORD28B-201ENST00000390993 MAMSTRQ6ZN01 415 aa4.11□□□□□ -1.75
SNORD28B-201ENST00000390993 IFNL1Q8IU54 200 aa4.11□□□□□ -1.75
SNORD28B-201ENST00000390993 TMEM106CQ9BVX2 250 aa4.11□□□□□ -1.75
SNORD28B-201ENST00000390993 METRNQ9UJH8 293 aa4.11□□□□□ -1.75
SNORD28B-201ENST00000390993 ATN1P54259 1190 aaPredicted RBP4.1□□□□□ -1.75
SNORD28B-201ENST00000390993 BMP2KQ9NSY1 1161 aaPredicted RBP4.1□□□□□ -1.75
SNORD28B-201ENST00000390993 TTLL13PA6NNM8 815 aa4.09□□□□□ -1.75
SNORD28B-201ENST00000390993 TRIM35Q9UPQ4 493 aa4.09□□□□□ -1.75
SNORD28B-201ENST00000390993 PLCG2P16885 1265 aa4.08□□□□□ -1.76
SNORD28B-201ENST00000390993 MKRN3Q13064 507 aaKnown RBP4.08□□□□□ -1.76
SNORD28B-201ENST00000390993 PDAP1Q13442 181 aaKnown RBP4.08□□□□□ -1.76
SNORD28B-201ENST00000390993 SCUBE2Q9NQ36 999 aa4.08□□□□□ -1.76
SNORD28B-201ENST00000390993 PCDHB8Q9UN66 801 aa4.08□□□□□ -1.76
SNORD28B-201ENST00000390993 PSEN1P49768 467 aa4.07□□□□□ -1.76
SNORD28B-201ENST00000390993 G3V3G9 751 aa4.06□□□□□ -1.76
SNORD28B-201ENST00000390993 PELP1Q8IZL8 1130 aaKnown RBP4.06□□□□□ -1.76
SNORD28B-201ENST00000390993 TRPC6Q9Y210 931 aa4.05□□□□□ -1.76
SNORD28B-201ENST00000390993 VGFO15240 615 aaPredicted RBP4.04□□□□□ -1.76
SNORD28B-201ENST00000390993 OCEL1Q9H607 264 aa4.04□□□□□ -1.76
SNORD28B-201ENST00000390993 RIOK3O14730 519 aaKnown RBP4.03□□□□□ -1.76
SNORD28B-201ENST00000390993 ECM2O94769 699 aaPredicted RBP4.02□□□□□ -1.77
SNORD28B-201ENST00000390993 L3MBTL3Q96JM7 780 aaPredicted RBP4.02□□□□□ -1.77
SNORD28B-201ENST00000390993 CABP2Q9NPB3 220 aa4.01□□□□□ -1.77
SNORD28B-201ENST00000390993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.01□□□□□ -1.77
SNORD28B-201ENST00000390993 C3orf67Q6ZVT6 689 aa4□□□□□ -1.77
SNORD28B-201ENST00000390993 EIF2AK3Q9NZJ5 1116 aaKnown RBP4□□□□□ -1.77
SNORD28B-201ENST00000390993 IRX5P78411 483 aaPredicted RBP3.99□□□□□ -1.77
SNORD28B-201ENST00000390993 OTUD5Q96G74 571 aa3.99□□□□□ -1.77
SNORD28B-201ENST00000390993 COLQQ9Y215 455 aaPredicted RBP3.99□□□□□ -1.77
SNORD28B-201ENST00000390993 POTEB2H3BUK9 544 aa3.98□□□□□ -1.77
SNORD28B-201ENST00000390993 SNPHO15079 494 aa3.98□□□□□ -1.77
SNORD28B-201ENST00000390993 SOX12O15370 315 aa3.98□□□□□ -1.77
SNORD28B-201ENST00000390993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.97□□□□□ -1.77
SNORD28B-201ENST00000390993 STK25O00506 426 aa3.97□□□□□ -1.77
SNORD28B-201ENST00000390993 SLAIN1Q8ND83 568 aa3.97□□□□□ -1.77
SNORD28B-201ENST00000390993 ZFP91Q96JP5 570 aaPredicted RBP3.97□□□□□ -1.77
SNORD28B-201ENST00000390993 STK24Q9Y6E0 443 aa3.97□□□□□ -1.77
SNORD28B-201ENST00000390993 POTEFA5A3E0 1075 aa3.96□□□□□ -1.78
SNORD28B-201ENST00000390993 NLRP6P59044 892 aa3.95□□□□□ -1.78
SNORD28B-201ENST00000390993 EFCAB3Q8N7B9 438 aa3.95□□□□□ -1.78
SNORD28B-201ENST00000390993 BCL11BQ9C0K0 894 aaPredicted RBP3.95□□□□□ -1.78
SNORD28B-201ENST00000390993 RNF25Q96BH1 459 aaPredicted RBP3.94□□□□□ -1.78
SNORD28B-201ENST00000390993 BOLA1Q9Y3E2 137 aa3.94□□□□□ -1.78
SNORD28B-201ENST00000390993 PKD2Q13563 968 aa3.93□□□□□ -1.78
SNORD28B-201ENST00000390993 PDCD7Q8N8D1 485 aaKnown RBP3.93□□□□□ -1.78
SNORD28B-201ENST00000390993 FAM163AQ96GL9 167 aaPredicted RBP3.93□□□□□ -1.78
SNORD28B-201ENST00000390993 RYDENQ9NUL5 291 aaKnown RBP3.93□□□□□ -1.78
SNORD28B-201ENST00000390993 RGL2O15211 777 aa3.92□□□□□ -1.78
SNORD28B-201ENST00000390993 DCAF8L2P0C7V8 631 aa3.92□□□□□ -1.78
SNORD28B-201ENST00000390993 POTEJP0CG39 1038 aa3.92□□□□□ -1.78
SNORD28B-201ENST00000390993 RIMBP2O15034 1052 aa3.91□□□□□ -1.78
SNORD28B-201ENST00000390993 ILDR1Q86SU0 546 aaPredicted RBP3.91□□□□□ -1.78
SNORD28B-201ENST00000390993 CHGAP10645 457 aaKnown RBP3.9□□□□□ -1.79
SNORD28B-201ENST00000390993 PCDH10Q9P2E7 1040 aa3.9□□□□□ -1.79
SNORD28B-201ENST00000390993 PHF8Q9UPP1 1060 aa3.9□□□□□ -1.79
SNORD28B-201ENST00000390993 POTEMA6NI47 508 aa3.89□□□□□ -1.79
SNORD28B-201ENST00000390993 DOK7Q18PE1 504 aa3.89□□□□□ -1.79
SNORD28B-201ENST00000390993 DPY19L2Q6NUT2 758 aa3.89□□□□□ -1.79
SNORD28B-201ENST00000390993 ZNF710Q8N1W2 664 aa3.89□□□□□ -1.79
SNORD28B-201ENST00000390993 TMEM121BQ9BXQ6 578 aaPredicted RBP3.89□□□□□ -1.79
SNORD28B-201ENST00000390993 POTEGQ6S5H5 508 aa3.88□□□□□ -1.79
SNORD28B-201ENST00000390993 MICALL2Q8IY33 904 aa3.88□□□□□ -1.79
SNORD28B-201ENST00000390993 HS6ST3Q8IZP7 471 aa3.88□□□□□ -1.79
SNORD28B-201ENST00000390993 AMER1Q5JTC6 1135 aaPredicted RBP3.87□□□□□ -1.79
SNORD28B-201ENST00000390993 TMC2Q8TDI7 906 aa3.86□□□□□ -1.79
SNORD28B-201ENST00000390993 ST18O60284 1047 aa3.85□□□□□ -1.79
SNORD28B-201ENST00000390993 EMP3P54852 163 aa3.85□□□□□ -1.79
SNORD28B-201ENST00000390993 FBXO22Q8NEZ5 403 aa3.85□□□□□ -1.79
SNORD28B-201ENST00000390993 MS4A4AQ96JQ5 239 aa3.85□□□□□ -1.79
SNORD28B-201ENST00000390993 MFRPQ9BY79 579 aa3.85□□□□□ -1.79
SNORD28B-201ENST00000390993 ZSWIM6Q9HCJ5 1215 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms