RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 ZRANB1Q9UGI0 708 aa10.8□□□□□ -0.68
SNORA40.3-201ENST00000390964 GSE1Q14687 1217 aa10.79□□□□□ -0.68
SNORA40.3-201ENST00000390964 DCAF8Q5TAQ9 597 aa10.78□□□□□ -0.68
SNORA40.3-201ENST00000390964 CCDC61Q9Y6R9 512 aa10.76□□□□□ -0.69
SNORA40.3-201ENST00000390964 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
SNORA40.3-201ENST00000390964 CLCN6P51797 869 aa10.72□□□□□ -0.69
SNORA40.3-201ENST00000390964 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
SNORA40.3-201ENST00000390964 TRIM41Q8WV44 630 aa10.68□□□□□ -0.7
SNORA40.3-201ENST00000390964 PHF12Q96QT6 1004 aa10.67□□□□□ -0.7
SNORA40.3-201ENST00000390964 CHRM1P11229 460 aaPredicted RBP10.66□□□□□ -0.7
SNORA40.3-201ENST00000390964 POTEIP0CG38 1075 aa10.65□□□□□ -0.7
SNORA40.3-201ENST00000390964 KIF12Q96FN5 646 aa10.65□□□□□ -0.7
SNORA40.3-201ENST00000390964 PYGBP11216 843 aa10.63□□□□□ -0.71
SNORA40.3-201ENST00000390964 SGIP1Q9BQI5 828 aa10.63□□□□□ -0.71
SNORA40.3-201ENST00000390964 PKD2Q13563 968 aa10.62□□□□□ -0.71
SNORA40.3-201ENST00000390964 MAP3K13O43283 966 aa10.61□□□□□ -0.71
SNORA40.3-201ENST00000390964 AMER1Q5JTC6 1135 aaPredicted RBP10.6□□□□□ -0.71
SNORA40.3-201ENST00000390964 PCDHB13Q9Y5F0 798 aa10.58□□□□□ -0.72
SNORA40.3-201ENST00000390964 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
SNORA40.3-201ENST00000390964 MS4A3Q96HJ5 214 aa10.56□□□□□ -0.72
SNORA40.3-201ENST00000390964 GALR2O43603 387 aaPredicted RBP10.55□□□□□ -0.72
SNORA40.3-201ENST00000390964 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
SNORA40.3-201ENST00000390964 ZNF467Q7Z7K2 595 aaPredicted RBP10.54□□□□□ -0.72
SNORA40.3-201ENST00000390964 IFNL1Q8IU54 200 aa10.52□□□□□ -0.73
SNORA40.3-201ENST00000390964 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
SNORA40.3-201ENST00000390964 PCDHB8Q9UN66 801 aa10.49□□□□□ -0.73
SNORA40.3-201ENST00000390964 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
SNORA40.3-201ENST00000390964 RIOK3O14730 519 aaKnown RBP10.46□□□□□ -0.73
SNORA40.3-201ENST00000390964 TIE1P35590 1138 aa10.46□□□□□ -0.73
SNORA40.3-201ENST00000390964 RGL2O15211 777 aa10.45□□□□□ -0.74
SNORA40.3-201ENST00000390964 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
SNORA40.3-201ENST00000390964 TRPC6Q9Y210 931 aa10.44□□□□□ -0.74
SNORA40.3-201ENST00000390964 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
SNORA40.3-201ENST00000390964 VGFO15240 615 aaPredicted RBP10.42□□□□□ -0.74
SNORA40.3-201ENST00000390964 ASTLQ6HA08 431 aaPredicted RBP10.41□□□□□ -0.74
SNORA40.3-201ENST00000390964 PSEN1P49768 467 aa10.4□□□□□ -0.74
SNORA40.3-201ENST00000390964 BMP2KQ9NSY1 1161 aaPredicted RBP10.4□□□□□ -0.74
SNORA40.3-201ENST00000390964 TTLL13PA6NNM8 815 aa10.38□□□□□ -0.75
SNORA40.3-201ENST00000390964 ATMINO43313 823 aaPredicted RBP10.38□□□□□ -0.75
SNORA40.3-201ENST00000390964 TMEM106CQ9BVX2 250 aa10.38□□□□□ -0.75
SNORA40.3-201ENST00000390964 ATN1P54259 1190 aaPredicted RBP10.35□□□□□ -0.75
SNORA40.3-201ENST00000390964 PLSCR2Q9NRY7 297 aa10.35□□□□□ -0.75
SNORA40.3-201ENST00000390964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.34□□□□□ -0.75
SNORA40.3-201ENST00000390964 ZFP91Q96JP5 570 aaPredicted RBP10.34□□□□□ -0.75
SNORA40.3-201ENST00000390964 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
SNORA40.3-201ENST00000390964 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
SNORA40.3-201ENST00000390964 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
SNORA40.3-201ENST00000390964 POTEB2H3BUK9 544 aa10.28□□□□□ -0.76
SNORA40.3-201ENST00000390964 STK25O00506 426 aa10.28□□□□□ -0.76
SNORA40.3-201ENST00000390964 DCAF8L2P0C7V8 631 aa10.27□□□□□ -0.77
SNORA40.3-201ENST00000390964 SLC39A7Q92504 469 aa10.27□□□□□ -0.77
SNORA40.3-201ENST00000390964 BCL11BQ9C0K0 894 aaPredicted RBP10.27□□□□□ -0.77
SNORA40.3-201ENST00000390964 GOLGA2Q08379 1002 aa10.26□□□□□ -0.77
SNORA40.3-201ENST00000390964 IER5LQ5T953 404 aa10.26□□□□□ -0.77
SNORA40.3-201ENST00000390964 HS6ST3Q8IZP7 471 aa10.26□□□□□ -0.77
SNORA40.3-201ENST00000390964 CABP2Q9NPB3 220 aa10.26□□□□□ -0.77
SNORA40.3-201ENST00000390964 STK24Q9Y6E0 443 aa10.26□□□□□ -0.77
SNORA40.3-201ENST00000390964 C7P10643 843 aa10.25□□□□□ -0.77
SNORA40.3-201ENST00000390964 CHGAP10645 457 aaKnown RBP10.24□□□□□ -0.77
SNORA40.3-201ENST00000390964 MKRN3Q13064 507 aaKnown RBP10.24□□□□□ -0.77
SNORA40.3-201ENST00000390964 EFCAB3Q8N7B9 438 aa10.21□□□□□ -0.77
SNORA40.3-201ENST00000390964 DNAJC5Q9H3Z4 198 aa10.21□□□□□ -0.77
SNORA40.3-201ENST00000390964 METRNQ9UJH8 293 aa10.21□□□□□ -0.77
SNORA40.3-201ENST00000390964 POTEMA6NI47 508 aa10.19□□□□□ -0.78
SNORA40.3-201ENST00000390964 SOX12O15370 315 aa10.19□□□□□ -0.78
SNORA40.3-201ENST00000390964 IRX5P78411 483 aaPredicted RBP10.18□□□□□ -0.78
SNORA40.3-201ENST00000390964 SEC24BO95487 1268 aa10.16□□□□□ -0.78
SNORA40.3-201ENST00000390964 ILDR1Q86SU0 546 aaPredicted RBP10.16□□□□□ -0.78
SNORA40.3-201ENST00000390964 POTEFA5A3E0 1075 aa10.15□□□□□ -0.78
SNORA40.3-201ENST00000390964 POTEGQ6S5H5 508 aa10.15□□□□□ -0.78
SNORA40.3-201ENST00000390964 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
SNORA40.3-201ENST00000390964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.15□□□□□ -0.78
SNORA40.3-201ENST00000390964 PLCG2P16885 1265 aa10.14□□□□□ -0.79
SNORA40.3-201ENST00000390964 COLQQ9Y215 455 aaPredicted RBP10.14□□□□□ -0.79
SNORA40.3-201ENST00000390964 MAMSTRQ6ZN01 415 aa10.12□□□□□ -0.79
SNORA40.3-201ENST00000390964 NLRP6P59044 892 aa10.11□□□□□ -0.79
SNORA40.3-201ENST00000390964 PDCD7Q8N8D1 485 aaKnown RBP10.11□□□□□ -0.79
SNORA40.3-201ENST00000390964 MFRPQ9BY79 579 aa10.11□□□□□ -0.79
SNORA40.3-201ENST00000390964 PCDH10Q9P2E7 1040 aa10.11□□□□□ -0.79
SNORA40.3-201ENST00000390964 PHF8Q9UPP1 1060 aa10.11□□□□□ -0.79
SNORA40.3-201ENST00000390964 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
SNORA40.3-201ENST00000390964 NKX1-1Q15270 411 aaPredicted RBP10.09□□□□□ -0.79
SNORA40.3-201ENST00000390964 FBXO22Q8NEZ5 403 aa10.09□□□□□ -0.79
SNORA40.3-201ENST00000390964 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
SNORA40.3-201ENST00000390964 RYDENQ9NUL5 291 aaKnown RBP10.07□□□□□ -0.8
SNORA40.3-201ENST00000390964 MS4A4AQ96JQ5 239 aa10.06□□□□□ -0.8
SNORA40.3-201ENST00000390964 L3MBTL3Q96JM7 780 aaPredicted RBP10.04□□□□□ -0.8
SNORA40.3-201ENST00000390964 DPY19L2Q6NUT2 758 aa10.03□□□□□ -0.8
SNORA40.3-201ENST00000390964 SCUBE2Q9NQ36 999 aa10.03□□□□□ -0.8
SNORA40.3-201ENST00000390964 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.03□□□□□ -0.8
SNORA40.3-201ENST00000390964 GTPBP6O43824 516 aaPredicted RBP10.01□□□□□ -0.81
SNORA40.3-201ENST00000390964 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
SNORA40.3-201ENST00000390964 G3V3G9 751 aa9.97□□□□□ -0.81
SNORA40.3-201ENST00000390964 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
SNORA40.3-201ENST00000390964 TMEM121BQ9BXQ6 578 aaPredicted RBP9.97□□□□□ -0.81
SNORA40.3-201ENST00000390964 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.82
SNORA40.3-201ENST00000390964 FAM163AQ96GL9 167 aaPredicted RBP9.95□□□□□ -0.82
SNORA40.3-201ENST00000390964 PPP1R37O75864 691 aa9.94□□□□□ -0.82
SNORA40.3-201ENST00000390964 MICALL2Q8IY33 904 aa9.94□□□□□ -0.82
SNORA40.3-201ENST00000390964 C3orf67Q6ZVT6 689 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms