RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 RIOK3O14730 519 aaKnown RBP6.37□□□□□ -1.39
RNU6-140P-201ENST00000384566 DCAF8Q5TAQ9 597 aa6.37□□□□□ -1.39
RNU6-140P-201ENST00000384566 GTPBP6O43824 516 aaPredicted RBP6.35□□□□□ -1.39
RNU6-140P-201ENST00000384566 NKX1-1Q15270 411 aaPredicted RBP6.35□□□□□ -1.39
RNU6-140P-201ENST00000384566 VGFO15240 615 aaPredicted RBP6.34□□□□□ -1.39
RNU6-140P-201ENST00000384566 POTEDQ86YR6 584 aa6.34□□□□□ -1.39
RNU6-140P-201ENST00000384566 SPDYE1Q8NFV5 336 aaPredicted RBP6.33□□□□□ -1.4
RNU6-140P-201ENST00000384566 STK25O00506 426 aa6.32□□□□□ -1.4
RNU6-140P-201ENST00000384566 CHRM1P11229 460 aaPredicted RBP6.32□□□□□ -1.4
RNU6-140P-201ENST00000384566 FAM212AQ96EL1 285 aa6.32□□□□□ -1.4
RNU6-140P-201ENST00000384566 SGIP1Q9BQI5 828 aa6.31□□□□□ -1.4
RNU6-140P-201ENST00000384566 RYDENQ9NUL5 291 aaKnown RBP6.31□□□□□ -1.4
RNU6-140P-201ENST00000384566 PRR29P0C7W0 189 aa6.28□□□□□ -1.4
RNU6-140P-201ENST00000384566 CREBZFQ9NS37 354 aa6.28□□□□□ -1.4
RNU6-140P-201ENST00000384566 MNX1P50219 401 aaPredicted RBP6.27□□□□□ -1.41
RNU6-140P-201ENST00000384566 AKT1S1Q96B36 256 aa6.27□□□□□ -1.41
RNU6-140P-201ENST00000384566 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.26□□□□□ -1.41
RNU6-140P-201ENST00000384566 ZFP91Q96JP5 570 aaPredicted RBP6.26□□□□□ -1.41
RNU6-140P-201ENST00000384566 RBM42Q9BTD8 480 aaKnown RBP6.26□□□□□ -1.41
RNU6-140P-201ENST00000384566 CLEC11AQ9Y240 323 aa6.26□□□□□ -1.41
RNU6-140P-201ENST00000384566 STK24Q9Y6E0 443 aa6.26□□□□□ -1.41
RNU6-140P-201ENST00000384566 BCL11BQ9C0K0 894 aaPredicted RBP6.25□□□□□ -1.41
RNU6-140P-201ENST00000384566 CACNB1Q02641 598 aaPredicted RBP6.24□□□□□ -1.41
RNU6-140P-201ENST00000384566 RASEFQ8IZ41 740 aa6.24□□□□□ -1.41
RNU6-140P-201ENST00000384566 P3H3Q8IVL6 736 aa6.23□□□□□ -1.41
RNU6-140P-201ENST00000384566 PYGBP11216 843 aa6.21□□□□□ -1.42
RNU6-140P-201ENST00000384566 GTF3C3Q9Y5Q9 886 aa6.21□□□□□ -1.42
RNU6-140P-201ENST00000384566 ERICH6Q7L0X2 663 aa6.2□□□□□ -1.42
RNU6-140P-201ENST00000384566 REM2Q8IYK8 340 aaPredicted RBP6.2□□□□□ -1.42
RNU6-140P-201ENST00000384566 WDR70Q9NW82 654 aa6.19□□□□□ -1.42
RNU6-140P-201ENST00000384566 TULP1O00294 542 aaPredicted RBP6.18□□□□□ -1.42
RNU6-140P-201ENST00000384566 TMEM132AQ24JP5 1023 aa6.18□□□□□ -1.42
RNU6-140P-201ENST00000384566 TIMELESSQ9UNS1 1208 aa6.18□□□□□ -1.42
RNU6-140P-201ENST00000384566 ZNF467Q7Z7K2 595 aaPredicted RBP6.16□□□□□ -1.42
RNU6-140P-201ENST00000384566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.13□□□□□ -1.43
RNU6-140P-201ENST00000384566 KCNV2Q8TDN2 545 aa6.13□□□□□ -1.43
RNU6-140P-201ENST00000384566 PDAP1Q13442 181 aaKnown RBP6.12□□□□□ -1.43
RNU6-140P-201ENST00000384566 LMOD2Q6P5Q4 547 aa6.12□□□□□ -1.43
RNU6-140P-201ENST00000384566 CADPS2Q86UW7 1296 aa6.12□□□□□ -1.43
RNU6-140P-201ENST00000384566 PITPNM1O00562 1244 aa6.1□□□□□ -1.43
RNU6-140P-201ENST00000384566 TSPYL2Q9H2G4 693 aaPredicted RBP6.1□□□□□ -1.43
RNU6-140P-201ENST00000384566 ARHGEF1Q92888 912 aaKnown RBP6.08□□□□□ -1.44
RNU6-140P-201ENST00000384566 PSEN1P49768 467 aa6.07□□□□□ -1.44
RNU6-140P-201ENST00000384566 MFRPQ9BY79 579 aa6.07□□□□□ -1.44
RNU6-140P-201ENST00000384566 PCDHB8Q9UN66 801 aa6.07□□□□□ -1.44
RNU6-140P-201ENST00000384566 PCDHB13Q9Y5F0 798 aa6.07□□□□□ -1.44
RNU6-140P-201ENST00000384566 ZNF579Q8NAF0 562 aaKnown RBP6.06□□□□□ -1.44
RNU6-140P-201ENST00000384566 ARXQ96QS3 562 aa6.05□□□□□ -1.44
RNU6-140P-201ENST00000384566 FARP1Q9Y4F1 1045 aaPredicted RBP6.05□□□□□ -1.44
RNU6-140P-201ENST00000384566 E2F4Q16254 413 aa6.04□□□□□ -1.44
RNU6-140P-201ENST00000384566 CHADLQ6NUI6 762 aa6.04□□□□□ -1.44
RNU6-140P-201ENST00000384566 CCDC61Q9Y6R9 512 aa6.04□□□□□ -1.44
RNU6-140P-201ENST00000384566 SOX12O15370 315 aa6.03□□□□□ -1.44
RNU6-140P-201ENST00000384566 NLRP6P59044 892 aa6.03□□□□□ -1.44
RNU6-140P-201ENST00000384566 ZC3H15Q8WU90 426 aaKnown RBP6.03□□□□□ -1.44
RNU6-140P-201ENST00000384566 BRPF1P55201 1214 aaPredicted RBP6.02□□□□□ -1.45
RNU6-140P-201ENST00000384566 C14orf37Q86TY3 774 aa6.02□□□□□ -1.45
RNU6-140P-201ENST00000384566 TESPA1A2RU30 521 aaPredicted RBP6.01□□□□□ -1.45
RNU6-140P-201ENST00000384566 PPP1R37O75864 691 aa6.01□□□□□ -1.45
RNU6-140P-201ENST00000384566 FBXO22Q8NEZ5 403 aa6.01□□□□□ -1.45
RNU6-140P-201ENST00000384566 EFCAB3Q8N7B9 438 aa6□□□□□ -1.45
RNU6-140P-201ENST00000384566 SEMA3EO15041 775 aa5.99□□□□□ -1.45
RNU6-140P-201ENST00000384566 PAK3O75914 559 aaPredicted RBP5.99□□□□□ -1.45
RNU6-140P-201ENST00000384566 SMYD5Q6GMV2 418 aa5.99□□□□□ -1.45
RNU6-140P-201ENST00000384566 CABP2Q9NPB3 220 aa5.99□□□□□ -1.45
RNU6-140P-201ENST00000384566 NEUROD2Q15784 382 aa5.98□□□□□ -1.45
RNU6-140P-201ENST00000384566 IFNL1Q8IU54 200 aa5.98□□□□□ -1.45
RNU6-140P-201ENST00000384566 PHF8Q9UPP1 1060 aa5.98□□□□□ -1.45
RNU6-140P-201ENST00000384566 PRKAR2AP13861 404 aaKnown RBP5.97□□□□□ -1.45
RNU6-140P-201ENST00000384566 PDE4AP27815 886 aa5.97□□□□□ -1.45
RNU6-140P-201ENST00000384566 SLC24A3Q9HC58 644 aa5.97□□□□□ -1.45
RNU6-140P-201ENST00000384566 MAP3K13O43283 966 aa5.96□□□□□ -1.46
RNU6-140P-201ENST00000384566 ZMYND10O75800 440 aa5.95□□□□□ -1.46
RNU6-140P-201ENST00000384566 KIF12Q96FN5 646 aa5.95□□□□□ -1.46
RNU6-140P-201ENST00000384566 LARP6Q9BRS8 491 aaKnown RBP5.95□□□□□ -1.46
RNU6-140P-201ENST00000384566 ARIH1Q9Y4X5 557 aaPredicted RBP5.95□□□□□ -1.46
RNU6-140P-201ENST00000384566 NCKAP5LQ9HCH0 1330 aa5.95□□□□□ -1.46
RNU6-140P-201ENST00000384566 MFSD10Q14728 455 aa5.94□□□□□ -1.46
RNU6-140P-201ENST00000384566 HOMEZQ8IX15 550 aa5.93□□□□□ -1.46
RNU6-140P-201ENST00000384566 FXR2P51116 673 aaKnown RBP eCLIP5.92□□□□□ -1.46
RNU6-140P-201ENST00000384566 DDX27Q96GQ7 796 aaKnown RBP5.92□□□□□ -1.46
RNU6-140P-201ENST00000384566 CRISPLD2Q9H0B8 497 aa5.92□□□□□ -1.46
RNU6-140P-201ENST00000384566 BARGINQ6ZT62 677 aa5.91□□□□□ -1.46
RNU6-140P-201ENST00000384566 DAXXQ9UER7 740 aaPredicted RBP5.91□□□□□ -1.46
RNU6-140P-201ENST00000384566 CAMK2BQ13554 666 aa5.9□□□□□ -1.46
RNU6-140P-201ENST00000384566 MS4A4AQ96JQ5 239 aa5.9□□□□□ -1.46
RNU6-140P-201ENST00000384566 GOLGA2Q08379 1002 aa5.89□□□□□ -1.47
RNU6-140P-201ENST00000384566 AK7Q96M32 723 aa5.88□□□□□ -1.47
RNU6-140P-201ENST00000384566 ZRANB1Q9UGI0 708 aa5.86□□□□□ -1.47
RNU6-140P-201ENST00000384566 MKRN3Q13064 507 aaKnown RBP5.85□□□□□ -1.47
RNU6-140P-201ENST00000384566 GPIHBP1Q8IV16 184 aa5.85□□□□□ -1.47
RNU6-140P-201ENST00000384566 KRI1Q8N9T8 703 aaKnown RBP5.85□□□□□ -1.47
RNU6-140P-201ENST00000384566 RBM26Q5T8P6 1007 aaKnown RBP5.84□□□□□ -1.47
RNU6-140P-201ENST00000384566 TMEM106CQ9BVX2 250 aa5.84□□□□□ -1.47
RNU6-140P-201ENST00000384566 SUPT5HO00267 1087 aaKnown RBP5.83□□□□□ -1.48
RNU6-140P-201ENST00000384566 MLLT3P42568 568 aaPredicted RBP5.83□□□□□ -1.48
RNU6-140P-201ENST00000384566 PPP1R15BQ5SWA1 713 aa5.83□□□□□ -1.48
RNU6-140P-201ENST00000384566 GPHNQ9NQX3 736 aaPredicted RBP5.83□□□□□ -1.48
RNU6-140P-201ENST00000384566 CD44P16070 742 aaKnown RBP5.82□□□□□ -1.48
RNU6-140P-201ENST00000384566 PIP4P2Q8N4L2 257 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms