RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
RNU6-40P-201ENST00000384254 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
RNU6-40P-201ENST00000384254 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
RNU6-40P-201ENST00000384254 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
RNU6-40P-201ENST00000384254 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
RNU6-40P-201ENST00000384254 HS6ST3Q8IZP7 471 aa12.53□□□□□ -0.4
RNU6-40P-201ENST00000384254 RASEFQ8IZ41 740 aa12.49□□□□□ -0.41
RNU6-40P-201ENST00000384254 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
RNU6-40P-201ENST00000384254 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
RNU6-40P-201ENST00000384254 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
RNU6-40P-201ENST00000384254 BCANQ96GW7 911 aa12.44□□□□□ -0.42
RNU6-40P-201ENST00000384254 STK25O00506 426 aa12.42□□□□□ -0.42
RNU6-40P-201ENST00000384254 PYGBP11216 843 aa12.4□□□□□ -0.42
RNU6-40P-201ENST00000384254 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
RNU6-40P-201ENST00000384254 DNAJC5Q9H3Z4 198 aa12.39□□□□□ -0.43
RNU6-40P-201ENST00000384254 TSHZ2Q9NRE2 1034 aa12.36□□□□□ -0.43
RNU6-40P-201ENST00000384254 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
RNU6-40P-201ENST00000384254 TSPYL2Q9H2G4 693 aaPredicted RBP12.34□□□□□ -0.43
RNU6-40P-201ENST00000384254 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
RNU6-40P-201ENST00000384254 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
RNU6-40P-201ENST00000384254 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
RNU6-40P-201ENST00000384254 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
RNU6-40P-201ENST00000384254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
RNU6-40P-201ENST00000384254 ZFP91Q96JP5 570 aaPredicted RBP12.31□□□□□ -0.44
RNU6-40P-201ENST00000384254 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
RNU6-40P-201ENST00000384254 RYDENQ9NUL5 291 aaKnown RBP12.31□□□□□ -0.44
RNU6-40P-201ENST00000384254 ZNF467Q7Z7K2 595 aaPredicted RBP12.3□□□□□ -0.44
RNU6-40P-201ENST00000384254 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
RNU6-40P-201ENST00000384254 NKX1-1Q15270 411 aaPredicted RBP12.27□□□□□ -0.45
RNU6-40P-201ENST00000384254 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
RNU6-40P-201ENST00000384254 GTPBP6O43824 516 aaPredicted RBP12.23□□□□□ -0.45
RNU6-40P-201ENST00000384254 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
RNU6-40P-201ENST00000384254 PDAP1Q13442 181 aaKnown RBP12.2□□□□□ -0.46
RNU6-40P-201ENST00000384254 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
RNU6-40P-201ENST00000384254 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
RNU6-40P-201ENST00000384254 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
RNU6-40P-201ENST00000384254 PCDHB13Q9Y5F0 798 aa12.15□□□□□ -0.46
RNU6-40P-201ENST00000384254 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
RNU6-40P-201ENST00000384254 NBR1Q14596 966 aa12.13□□□□□ -0.47
RNU6-40P-201ENST00000384254 PSEN1P49768 467 aa12.11□□□□□ -0.47
RNU6-40P-201ENST00000384254 MAP3K13O43283 966 aa12.03□□□□□ -0.48
RNU6-40P-201ENST00000384254 IFNL1Q8IU54 200 aa12.03□□□□□ -0.48
RNU6-40P-201ENST00000384254 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
RNU6-40P-201ENST00000384254 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
RNU6-40P-201ENST00000384254 KIF12Q96FN5 646 aa12.02□□□□□ -0.49
RNU6-40P-201ENST00000384254 TPRNQ4KMQ1 711 aa11.99□□□□□ -0.49
RNU6-40P-201ENST00000384254 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
RNU6-40P-201ENST00000384254 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
RNU6-40P-201ENST00000384254 WDR70Q9NW82 654 aa11.97□□□□□ -0.49
RNU6-40P-201ENST00000384254 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
RNU6-40P-201ENST00000384254 NLRP6P59044 892 aa11.95□□□□□ -0.5
RNU6-40P-201ENST00000384254 MFRPQ9BY79 579 aa11.95□□□□□ -0.5
RNU6-40P-201ENST00000384254 SOX12O15370 315 aa11.94□□□□□ -0.5
RNU6-40P-201ENST00000384254 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
RNU6-40P-201ENST00000384254 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
RNU6-40P-201ENST00000384254 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
RNU6-40P-201ENST00000384254 PHF8Q9UPP1 1060 aa11.86□□□□□ -0.51
RNU6-40P-201ENST00000384254 CADPS2Q86UW7 1296 aa11.84□□□□□ -0.51
RNU6-40P-201ENST00000384254 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
RNU6-40P-201ENST00000384254 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
RNU6-40P-201ENST00000384254 C19orf67A6NJJ6 358 aa11.81□□□□□ -0.52
RNU6-40P-201ENST00000384254 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
RNU6-40P-201ENST00000384254 MS4A3Q96HJ5 214 aa11.8□□□□□ -0.52
RNU6-40P-201ENST00000384254 PPP1R37O75864 691 aa11.79□□□□□ -0.52
RNU6-40P-201ENST00000384254 KCNV2Q8TDN2 545 aa11.76□□□□□ -0.53
RNU6-40P-201ENST00000384254 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
RNU6-40P-201ENST00000384254 TIE1P35590 1138 aa11.73□□□□□ -0.53
RNU6-40P-201ENST00000384254 E2F4Q16254 413 aa11.71□□□□□ -0.53
RNU6-40P-201ENST00000384254 PDE4AP27815 886 aa11.7□□□□□ -0.54
RNU6-40P-201ENST00000384254 TRPC6Q9Y210 931 aa11.7□□□□□ -0.54
RNU6-40P-201ENST00000384254 MS4A4AQ96JQ5 239 aa11.69□□□□□ -0.54
RNU6-40P-201ENST00000384254 CLCN6P51797 869 aa11.68□□□□□ -0.54
RNU6-40P-201ENST00000384254 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
RNU6-40P-201ENST00000384254 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
RNU6-40P-201ENST00000384254 HAX1O00165 279 aa11.67□□□□□ -0.54
RNU6-40P-201ENST00000384254 LARP6Q9BRS8 491 aaKnown RBP11.67□□□□□ -0.54
RNU6-40P-201ENST00000384254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.54
RNU6-40P-201ENST00000384254 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
RNU6-40P-201ENST00000384254 BMP2KQ9NSY1 1161 aaPredicted RBP11.63□□□□□ -0.55
RNU6-40P-201ENST00000384254 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
RNU6-40P-201ENST00000384254 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
RNU6-40P-201ENST00000384254 GALR2O43603 387 aaPredicted RBP11.6□□□□□ -0.55
RNU6-40P-201ENST00000384254 MFSD10Q14728 455 aa11.59□□□□□ -0.55
RNU6-40P-201ENST00000384254 LMOD2Q6P5Q4 547 aa11.59□□□□□ -0.55
RNU6-40P-201ENST00000384254 CRISPLD2Q9H0B8 497 aa11.59□□□□□ -0.55
RNU6-40P-201ENST00000384254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
RNU6-40P-201ENST00000384254 G3V3G9 751 aa11.54□□□□□ -0.56
RNU6-40P-201ENST00000384254 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
RNU6-40P-201ENST00000384254 SMYD5Q6GMV2 418 aa11.53□□□□□ -0.56
RNU6-40P-201ENST00000384254 SEMA3EO15041 775 aa11.5□□□□□ -0.57
RNU6-40P-201ENST00000384254 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
RNU6-40P-201ENST00000384254 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
RNU6-40P-201ENST00000384254 TMC2Q8TDI7 906 aa11.49□□□□□ -0.57
RNU6-40P-201ENST00000384254 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
RNU6-40P-201ENST00000384254 TESPA1A2RU30 521 aaPredicted RBP11.48□□□□□ -0.57
RNU6-40P-201ENST00000384254 IER5LQ5T953 404 aa11.48□□□□□ -0.57
RNU6-40P-201ENST00000384254 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
RNU6-40P-201ENST00000384254 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
RNU6-40P-201ENST00000384254 OCEL1Q9H607 264 aa11.47□□□□□ -0.57
RNU6-40P-201ENST00000384254 ARIH1Q9Y4X5 557 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms