RNA–Protein interactions for RNA: ENST00000383991.1

RNU6-546P-201, Transcript of RNA, U6 small nuclear 546, pseudogene, humanhuman

BASIC

Gene RNU6-546P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-546P-201ENST00000383991 CACNB1Q02641 598 aaPredicted RBP4.94□□□□□ -1.62
RNU6-546P-201ENST00000383991 SPDYE1Q8NFV5 336 aaPredicted RBP4.94□□□□□ -1.62
RNU6-546P-201ENST00000383991 RIOK3O14730 519 aaKnown RBP4.93□□□□□ -1.62
RNU6-546P-201ENST00000383991 DCAF8Q5TAQ9 597 aa4.93□□□□□ -1.62
RNU6-546P-201ENST00000383991 CHRM1P11229 460 aaPredicted RBP4.92□□□□□ -1.62
RNU6-546P-201ENST00000383991 NKX1-1Q15270 411 aaPredicted RBP4.92□□□□□ -1.62
RNU6-546P-201ENST00000383991 AKT1S1Q96B36 256 aa4.92□□□□□ -1.62
RNU6-546P-201ENST00000383991 CREBZFQ9NS37 354 aa4.92□□□□□ -1.62
RNU6-546P-201ENST00000383991 GTPBP6O43824 516 aaPredicted RBP4.91□□□□□ -1.62
RNU6-546P-201ENST00000383991 MNX1P50219 401 aaPredicted RBP4.91□□□□□ -1.62
RNU6-546P-201ENST00000383991 VGFO15240 615 aaPredicted RBP4.9□□□□□ -1.63
RNU6-546P-201ENST00000383991 FAM212AQ96EL1 285 aa4.9□□□□□ -1.63
RNU6-546P-201ENST00000383991 SGIP1Q9BQI5 828 aa4.9□□□□□ -1.63
RNU6-546P-201ENST00000383991 RBM42Q9BTD8 480 aaKnown RBP4.9□□□□□ -1.63
RNU6-546P-201ENST00000383991 PRR29P0C7W0 189 aa4.89□□□□□ -1.63
RNU6-546P-201ENST00000383991 NBR1Q14596 966 aa4.89□□□□□ -1.63
RNU6-546P-201ENST00000383991 STK25O00506 426 aa4.88□□□□□ -1.63
RNU6-546P-201ENST00000383991 REM2Q8IYK8 340 aaPredicted RBP4.87□□□□□ -1.63
RNU6-546P-201ENST00000383991 RASEFQ8IZ41 740 aa4.87□□□□□ -1.63
RNU6-546P-201ENST00000383991 CLEC11AQ9Y240 323 aa4.87□□□□□ -1.63
RNU6-546P-201ENST00000383991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.85□□□□□ -1.63
RNU6-546P-201ENST00000383991 ZFP91Q96JP5 570 aaPredicted RBP4.85□□□□□ -1.63
RNU6-546P-201ENST00000383991 BCL11BQ9C0K0 894 aaPredicted RBP4.84□□□□□ -1.63
RNU6-546P-201ENST00000383991 RYDENQ9NUL5 291 aaKnown RBP4.84□□□□□ -1.63
RNU6-546P-201ENST00000383991 STK24Q9Y6E0 443 aa4.84□□□□□ -1.63
RNU6-546P-201ENST00000383991 PYGBP11216 843 aa4.82□□□□□ -1.64
RNU6-546P-201ENST00000383991 PITPNM1O00562 1244 aa4.8□□□□□ -1.64
RNU6-546P-201ENST00000383991 ZNF467Q7Z7K2 595 aaPredicted RBP4.78□□□□□ -1.64
RNU6-546P-201ENST00000383991 PDAP1Q13442 181 aaKnown RBP4.76□□□□□ -1.65
RNU6-546P-201ENST00000383991 P3H3Q8IVL6 736 aa4.76□□□□□ -1.65
RNU6-546P-201ENST00000383991 CADPS2Q86UW7 1296 aa4.75□□□□□ -1.65
RNU6-546P-201ENST00000383991 TSPYL2Q9H2G4 693 aaPredicted RBP4.75□□□□□ -1.65
RNU6-546P-201ENST00000383991 CHADLQ6NUI6 762 aa4.74□□□□□ -1.65
RNU6-546P-201ENST00000383991 FARP1Q9Y4F1 1045 aaPredicted RBP4.74□□□□□ -1.65
RNU6-546P-201ENST00000383991 WDR70Q9NW82 654 aa4.73□□□□□ -1.65
RNU6-546P-201ENST00000383991 PCDHB8Q9UN66 801 aa4.73□□□□□ -1.65
RNU6-546P-201ENST00000383991 PCDHB13Q9Y5F0 798 aa4.73□□□□□ -1.65
RNU6-546P-201ENST00000383991 PSEN1P49768 467 aa4.72□□□□□ -1.65
RNU6-546P-201ENST00000383991 ZNF579Q8NAF0 562 aaKnown RBP4.72□□□□□ -1.65
RNU6-546P-201ENST00000383991 KCNV2Q8TDN2 545 aa4.72□□□□□ -1.65
RNU6-546P-201ENST00000383991 MFRPQ9BY79 579 aa4.72□□□□□ -1.65
RNU6-546P-201ENST00000383991 CCDC61Q9Y6R9 512 aa4.72□□□□□ -1.65
RNU6-546P-201ENST00000383991 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNU6-546P-201ENST00000383991 TMEM132AQ24JP5 1023 aa4.69□□□□□ -1.66
RNU6-546P-201ENST00000383991 LMOD2Q6P5Q4 547 aa4.69□□□□□ -1.66
RNU6-546P-201ENST00000383991 GTF3C3Q9Y5Q9 886 aa4.69□□□□□ -1.66
RNU6-546P-201ENST00000383991 PRKAR2AP13861 404 aaKnown RBP4.68□□□□□ -1.66
RNU6-546P-201ENST00000383991 FBXO22Q8NEZ5 403 aa4.68□□□□□ -1.66
RNU6-546P-201ENST00000383991 ARHGEF1Q92888 912 aaKnown RBP4.68□□□□□ -1.66
RNU6-546P-201ENST00000383991 SOX12O15370 315 aa4.67□□□□□ -1.66
RNU6-546P-201ENST00000383991 PPP1R37O75864 691 aa4.67□□□□□ -1.66
RNU6-546P-201ENST00000383991 FXR2P51116 673 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU6-546P-201ENST00000383991 NLRP6P59044 892 aa4.67□□□□□ -1.66
RNU6-546P-201ENST00000383991 IFNL1Q8IU54 200 aa4.67□□□□□ -1.66
RNU6-546P-201ENST00000383991 TIMELESSQ9UNS1 1208 aa4.67□□□□□ -1.66
RNU6-546P-201ENST00000383991 TULP1O00294 542 aaPredicted RBP4.66□□□□□ -1.66
RNU6-546P-201ENST00000383991 EFCAB3Q8N7B9 438 aa4.66□□□□□ -1.66
RNU6-546P-201ENST00000383991 KIF12Q96FN5 646 aa4.66□□□□□ -1.66
RNU6-546P-201ENST00000383991 MAP3K13O43283 966 aa4.65□□□□□ -1.67
RNU6-546P-201ENST00000383991 PAK3O75914 559 aaPredicted RBP4.65□□□□□ -1.67
RNU6-546P-201ENST00000383991 E2F4Q16254 413 aa4.65□□□□□ -1.67
RNU6-546P-201ENST00000383991 ERICH6Q7L0X2 663 aa4.65□□□□□ -1.67
RNU6-546P-201ENST00000383991 CABP2Q9NPB3 220 aa4.65□□□□□ -1.67
RNU6-546P-201ENST00000383991 PHF8Q9UPP1 1060 aa4.65□□□□□ -1.67
RNU6-546P-201ENST00000383991 TESPA1A2RU30 521 aaPredicted RBP4.63□□□□□ -1.67
RNU6-546P-201ENST00000383991 ZC3H15Q8WU90 426 aaKnown RBP4.62□□□□□ -1.67
RNU6-546P-201ENST00000383991 NCKAP5LQ9HCH0 1330 aa4.62□□□□□ -1.67
RNU6-546P-201ENST00000383991 SEMA3EO15041 775 aa4.61□□□□□ -1.67
RNU6-546P-201ENST00000383991 PDE4AP27815 886 aa4.61□□□□□ -1.67
RNU6-546P-201ENST00000383991 BRPF1P55201 1214 aaPredicted RBP4.61□□□□□ -1.67
RNU6-546P-201ENST00000383991 MFSD10Q14728 455 aa4.61□□□□□ -1.67
RNU6-546P-201ENST00000383991 MS4A4AQ96JQ5 239 aa4.61□□□□□ -1.67
RNU6-546P-201ENST00000383991 LARP6Q9BRS8 491 aaKnown RBP4.6□□□□□ -1.67
RNU6-546P-201ENST00000383991 ARIH1Q9Y4X5 557 aaPredicted RBP4.6□□□□□ -1.67
RNU6-546P-201ENST00000383991 PIP4P2Q8N4L2 257 aa4.59□□□□□ -1.67
RNU6-546P-201ENST00000383991 CRISPLD2Q9H0B8 497 aa4.59□□□□□ -1.67
RNU6-546P-201ENST00000383991 CAMK2BQ13554 666 aa4.58□□□□□ -1.68
RNU6-546P-201ENST00000383991 SMYD5Q6GMV2 418 aa4.58□□□□□ -1.68
RNU6-546P-201ENST00000383991 CHRDL2Q6WN34 429 aa4.58□□□□□ -1.68
RNU6-546P-201ENST00000383991 ZRANB1Q9UGI0 708 aa4.58□□□□□ -1.68
RNU6-546P-201ENST00000383991 ZMYND10O75800 440 aa4.57□□□□□ -1.68
RNU6-546P-201ENST00000383991 DDX27Q96GQ7 796 aaKnown RBP4.57□□□□□ -1.68
RNU6-546P-201ENST00000383991 PHF12Q96QT6 1004 aa4.57□□□□□ -1.68
RNU6-546P-201ENST00000383991 SLC24A3Q9HC58 644 aa4.57□□□□□ -1.68
RNU6-546P-201ENST00000383991 CD44P16070 742 aaKnown RBP4.56□□□□□ -1.68
RNU6-546P-201ENST00000383991 TMEM106CQ9BVX2 250 aa4.56□□□□□ -1.68
RNU6-546P-201ENST00000383991 GOLGA2Q08379 1002 aa4.55□□□□□ -1.68
RNU6-546P-201ENST00000383991 NEUROD2Q15784 382 aa4.55□□□□□ -1.68
RNU6-546P-201ENST00000383991 BARGINQ6ZT62 677 aa4.55□□□□□ -1.68
RNU6-546P-201ENST00000383991 C14orf37Q86TY3 774 aa4.55□□□□□ -1.68
RNU6-546P-201ENST00000383991 ILDR1Q86SU0 546 aaPredicted RBP4.54□□□□□ -1.68
RNU6-546P-201ENST00000383991 TRPC6Q9Y210 931 aa4.54□□□□□ -1.68
RNU6-546P-201ENST00000383991 MKRN3Q13064 507 aaKnown RBP4.53□□□□□ -1.68
RNU6-546P-201ENST00000383991 MS4A3Q96HJ5 214 aa4.53□□□□□ -1.68
RNU6-546P-201ENST00000383991 ARXQ96QS3 562 aa4.52□□□□□ -1.69
RNU6-546P-201ENST00000383991 GPHNQ9NQX3 736 aaPredicted RBP4.52□□□□□ -1.69
RNU6-546P-201ENST00000383991 TIE1P35590 1138 aa4.51□□□□□ -1.69
RNU6-546P-201ENST00000383991 MLLT3P42568 568 aaPredicted RBP4.51□□□□□ -1.69
RNU6-546P-201ENST00000383991 PPP1R15BQ5SWA1 713 aa4.51□□□□□ -1.69
RNU6-546P-201ENST00000383991 C19orf67A6NJJ6 358 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms