RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
SNAPC3-201ENST00000380799 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
SNAPC3-201ENST00000380799 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
SNAPC3-201ENST00000380799 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
SNAPC3-201ENST00000380799 NUBP1P53384 320 aa12.6□□□□□ -0.39
SNAPC3-201ENST00000380799 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
SNAPC3-201ENST00000380799 ASTLQ6HA08 431 aaPredicted RBP12.59□□□□□ -0.39
SNAPC3-201ENST00000380799 MAP3K13O43283 966 aa12.55□□□□□ -0.4
SNAPC3-201ENST00000380799 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
SNAPC3-201ENST00000380799 SGIP1Q9BQI5 828 aa12.54□□□□□ -0.4
SNAPC3-201ENST00000380799 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
SNAPC3-201ENST00000380799 SLC39A7Q92504 469 aa12.53□□□□□ -0.4
SNAPC3-201ENST00000380799 C7P10643 843 aa12.52□□□□□ -0.41
SNAPC3-201ENST00000380799 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
SNAPC3-201ENST00000380799 TIE1P35590 1138 aa12.5□□□□□ -0.41
SNAPC3-201ENST00000380799 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
SNAPC3-201ENST00000380799 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
SNAPC3-201ENST00000380799 PCDHB13Q9Y5F0 798 aa12.48□□□□□ -0.41
SNAPC3-201ENST00000380799 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
SNAPC3-201ENST00000380799 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
SNAPC3-201ENST00000380799 ATN1P54259 1190 aaPredicted RBP12.45□□□□□ -0.42
SNAPC3-201ENST00000380799 TRPC6Q9Y210 931 aa12.42□□□□□ -0.42
SNAPC3-201ENST00000380799 TTLL13PA6NNM8 815 aa12.39□□□□□ -0.43
SNAPC3-201ENST00000380799 GSE1Q14687 1217 aa12.39□□□□□ -0.43
SNAPC3-201ENST00000380799 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
SNAPC3-201ENST00000380799 IFNL1Q8IU54 200 aa12.38□□□□□ -0.43
SNAPC3-201ENST00000380799 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
SNAPC3-201ENST00000380799 OTUD5Q96G74 571 aa12.36□□□□□ -0.43
SNAPC3-201ENST00000380799 PYGBP11216 843 aa12.34□□□□□ -0.43
SNAPC3-201ENST00000380799 IER5LQ5T953 404 aa12.33□□□□□ -0.44
SNAPC3-201ENST00000380799 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
SNAPC3-201ENST00000380799 TMEM106CQ9BVX2 250 aa12.31□□□□□ -0.44
SNAPC3-201ENST00000380799 SEC24BO95487 1268 aa12.3□□□□□ -0.44
SNAPC3-201ENST00000380799 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
SNAPC3-201ENST00000380799 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.45
SNAPC3-201ENST00000380799 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
SNAPC3-201ENST00000380799 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
SNAPC3-201ENST00000380799 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
SNAPC3-201ENST00000380799 POTEFA5A3E0 1075 aa12.23□□□□□ -0.45
SNAPC3-201ENST00000380799 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
SNAPC3-201ENST00000380799 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
SNAPC3-201ENST00000380799 COLQQ9Y215 455 aaPredicted RBP12.21□□□□□ -0.45
SNAPC3-201ENST00000380799 PLCG2P16885 1265 aa12.18□□□□□ -0.46
SNAPC3-201ENST00000380799 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
SNAPC3-201ENST00000380799 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
SNAPC3-201ENST00000380799 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
SNAPC3-201ENST00000380799 GOLGA2Q08379 1002 aa12.11□□□□□ -0.47
SNAPC3-201ENST00000380799 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
SNAPC3-201ENST00000380799 PSEN1P49768 467 aa12.09□□□□□ -0.47
SNAPC3-201ENST00000380799 PDAP1Q13442 181 aaKnown RBP12.09□□□□□ -0.47
SNAPC3-201ENST00000380799 MKRN3Q13064 507 aaKnown RBP12.07□□□□□ -0.48
SNAPC3-201ENST00000380799 POTEMA6NI47 508 aa12□□□□□ -0.49
SNAPC3-201ENST00000380799 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
SNAPC3-201ENST00000380799 POTEGQ6S5H5 508 aa11.98□□□□□ -0.49
SNAPC3-201ENST00000380799 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
SNAPC3-201ENST00000380799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.494e-7■■■■■ 28.7
SNAPC3-201ENST00000380799 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
SNAPC3-201ENST00000380799 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
SNAPC3-201ENST00000380799 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
SNAPC3-201ENST00000380799 CABP2Q9NPB3 220 aa11.93□□□□□ -0.5
SNAPC3-201ENST00000380799 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
SNAPC3-201ENST00000380799 C3orf67Q6ZVT6 689 aa11.9□□□□□ -0.5
SNAPC3-201ENST00000380799 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
SNAPC3-201ENST00000380799 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
SNAPC3-201ENST00000380799 SNPHO15079 494 aa11.88□□□□□ -0.51
SNAPC3-201ENST00000380799 LCE2DQ5TA82 110 aaPredicted RBP11.88□□□□□ -0.51
SNAPC3-201ENST00000380799 G3V3G9 751 aa11.85□□□□□ -0.51
SNAPC3-201ENST00000380799 VGFO15240 615 aaPredicted RBP11.83□□□□□ -0.52
SNAPC3-201ENST00000380799 PLSCR2Q9NRY7 297 aa11.83□□□□□ -0.52
SNAPC3-201ENST00000380799 TAOK2Q9UL54 1235 aa11.83□□□□□ -0.52
SNAPC3-201ENST00000380799 RNF25Q96BH1 459 aaPredicted RBP11.79□□□□□ -0.52
SNAPC3-201ENST00000380799 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
SNAPC3-201ENST00000380799 ST18O60284 1047 aa11.78□□□□□ -0.52
SNAPC3-201ENST00000380799 EFCAB3Q8N7B9 438 aa11.78□□□□□ -0.52
SNAPC3-201ENST00000380799 TMEM121BQ9BXQ6 578 aaPredicted RBP11.78□□□□□ -0.52
SNAPC3-201ENST00000380799 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
SNAPC3-201ENST00000380799 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
SNAPC3-201ENST00000380799 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
SNAPC3-201ENST00000380799 SOX12O15370 315 aa11.75□□□□□ -0.53
SNAPC3-201ENST00000380799 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
SNAPC3-201ENST00000380799 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
SNAPC3-201ENST00000380799 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
SNAPC3-201ENST00000380799 NLRP6P59044 892 aa11.63□□□□□ -0.55
SNAPC3-201ENST00000380799 STK24Q9Y6E0 443 aa11.63□□□□□ -0.55
SNAPC3-201ENST00000380799 PHF8Q9UPP1 1060 aa11.62□□□□□ -0.55
SNAPC3-201ENST00000380799 STK25O00506 426 aa11.61□□□□□ -0.55
SNAPC3-201ENST00000380799 PKD2Q13563 968 aa11.61□□□□□ -0.55
SNAPC3-201ENST00000380799 MICALL2Q8IY33 904 aa11.61□□□□□ -0.55
SNAPC3-201ENST00000380799 MARVELD3Q96A59 401 aa11.59□□□□□ -0.55
SNAPC3-201ENST00000380799 MS4A4AQ96JQ5 239 aa11.59□□□□□ -0.55
SNAPC3-201ENST00000380799 EMP3P54852 163 aa11.58□□□□□ -0.56
SNAPC3-201ENST00000380799 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
SNAPC3-201ENST00000380799 ZNF710Q8N1W2 664 aa11.56□□□□□ -0.56
SNAPC3-201ENST00000380799 RGL2O15211 777 aa11.55□□□□□ -0.56
SNAPC3-201ENST00000380799 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
SNAPC3-201ENST00000380799 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
SNAPC3-201ENST00000380799 FBXO22Q8NEZ5 403 aa11.53□□□□□ -0.56
SNAPC3-201ENST00000380799 MFRPQ9BY79 579 aa11.5□□□□□ -0.57
SNAPC3-201ENST00000380799 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
SNAPC3-201ENST00000380799 TMEM92Q6UXU6 159 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms