RNA–Protein interactions for RNA: ENST00000379933.7

RREB1-203, Transcript of ras responsive element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene RREB1, Length 5,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RREB1-203ENST00000379933 UPF2Q9HAU5 1272 aaKnown RBP25.3■■□□□ 1.64
RREB1-203ENST00000379933 MYH16Q9H6N6 1097 aa25.29■■□□□ 1.64
RREB1-203ENST00000379933 NPHP1O15259 732 aa25.29■■□□□ 1.64
RREB1-203ENST00000379933 RRP7BPQ9NSQ0 103 aa25.26■■□□□ 1.63
RREB1-203ENST00000379933 KIF27Q86VH2 1401 aa25.25■■□□□ 1.63
RREB1-203ENST00000379933 POGKQ9P215 609 aa25.24■■□□□ 1.63
RREB1-203ENST00000379933 CDCA8Q53HL2 280 aa25.22■■□□□ 1.63
RREB1-203ENST00000379933 MLECQ14165 292 aa25.22■■□□□ 1.63
RREB1-203ENST00000379933 CFAP53Q96M91 514 aa25.2■■□□□ 1.63
RREB1-203ENST00000379933 CLIP1P30622 1438 aa25.2■■□□□ 1.63
RREB1-203ENST00000379933 FAM9BQ8IZU0 186 aa25.18■■□□□ 1.62
RREB1-203ENST00000379933 SALL2Q9Y467 1007 aaPredicted RBP25.18■■□□□ 1.62
RREB1-203ENST00000379933 RGL3Q3MIN7 710 aa25.18■■□□□ 1.62
RREB1-203ENST00000379933 KANK1Q14678 1352 aa25.17■■□□□ 1.62
RREB1-203ENST00000379933 ANP32AP39687 249 aaKnown RBP25.15■■□□□ 1.62
RREB1-203ENST00000379933 EEA1Q15075 1411 aa25.13■■□□□ 1.61
RREB1-203ENST00000379933 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
RREB1-203ENST00000379933 CDK11BP21127 795 aaKnown RBP25.11■■□□□ 1.61
RREB1-203ENST00000379933 ANP32BQ92688 251 aaKnown RBP25.1■■□□□ 1.61
RREB1-203ENST00000379933 PPM1GO15355 546 aaPredicted RBP25.08■■□□□ 1.61
RREB1-203ENST00000379933 HNRNPUQ00839 825 aaKnown RBP eCLIP25.06■■□□□ 1.69e-6■□□□□ 8.1
RREB1-203ENST00000379933 GOLGA3Q08378 1498 aa25.05■■□□□ 1.6
RREB1-203ENST00000379933 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
RREB1-203ENST00000379933 PDS5BQ9NTI5 1447 aa25.04■■□□□ 1.6
RREB1-203ENST00000379933 EIF4G2P78344 907 aaKnown RBP eCLIP25.02■■□□□ 1.62e-7■■■■■ 69.5
RREB1-203ENST00000379933 DDX10Q13206 875 aaKnown RBP25.02■■□□□ 1.6
RREB1-203ENST00000379933 CCNB3Q8WWL7 1395 aa25.01■■□□□ 1.59
RREB1-203ENST00000379933 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
RREB1-203ENST00000379933 KNSTRNQ9Y448 316 aa24.98■■□□□ 1.59
RREB1-203ENST00000379933 CARMIL2Q6F5E8 1435 aa24.98■■□□□ 1.59
RREB1-203ENST00000379933 MRS2Q9HD23 443 aa24.96■■□□□ 1.59
RREB1-203ENST00000379933 NUDCQ9Y266 331 aa24.96■■□□□ 1.59
RREB1-203ENST00000379933 MAPK8IP3Q9UPT6 1336 aa24.93■■□□□ 1.58
RREB1-203ENST00000379933 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
RREB1-203ENST00000379933 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
RREB1-203ENST00000379933 GGT6Q6P531 493 aa24.85■■□□□ 1.57
RREB1-203ENST00000379933 PNNQ9H307 717 aaKnown RBP24.83■■□□□ 1.57
RREB1-203ENST00000379933 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
RREB1-203ENST00000379933 GOLGA2Q08379 1002 aa24.82■■□□□ 1.56
RREB1-203ENST00000379933 CUX2O14529 1486 aa24.8■■□□□ 1.56
RREB1-203ENST00000379933 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
RREB1-203ENST00000379933 LAS1LQ9Y4W2 734 aaKnown RBP24.78■■□□□ 1.56
RREB1-203ENST00000379933 CCDC9Q9Y3X0 531 aaKnown RBP24.78■■□□□ 1.56
RREB1-203ENST00000379933 CECR2Q9BXF3 1484 aa24.77■■□□□ 1.56
RREB1-203ENST00000379933 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
RREB1-203ENST00000379933 CCDC136Q96JN2 1154 aa24.77■■□□□ 1.56
RREB1-203ENST00000379933 GTF3C3Q9Y5Q9 886 aa24.76■■□□□ 1.55
RREB1-203ENST00000379933 SRPK2P78362 688 aaKnown RBP24.74■■□□□ 1.55
RREB1-203ENST00000379933 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
RREB1-203ENST00000379933 EID1Q9Y6B2 187 aa24.74■■□□□ 1.55
RREB1-203ENST00000379933 CASC1Q6TDU7 716 aa24.73■■□□□ 1.55
RREB1-203ENST00000379933 TMX4Q9H1E5 349 aaPredicted RBP24.73■■□□□ 1.55
RREB1-203ENST00000379933 EFCAB2Q5VUJ9 269 aa24.73■■□□□ 1.55
RREB1-203ENST00000379933 CSB-PGBD3P0DP91 1061 aa24.72■■□□□ 1.55
RREB1-203ENST00000379933 EIF5BO60841 1220 aaKnown RBP24.7■■□□□ 1.54
RREB1-203ENST00000379933 SMARCA2P51531 1590 aa24.7■■□□□ 1.54
RREB1-203ENST00000379933 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
RREB1-203ENST00000379933 FKBP8Q14318 412 aa24.68■■□□□ 1.54
RREB1-203ENST00000379933 FTSJ3Q8IY81 847 aaKnown RBP24.67■■□□□ 1.54
RREB1-203ENST00000379933 SOX12O15370 315 aa24.67■■□□□ 1.54
RREB1-203ENST00000379933 PAK3O75914 559 aaPredicted RBP24.67■■□□□ 1.54
RREB1-203ENST00000379933 OS9Q13438 667 aaPredicted RBP24.66■■□□□ 1.54
RREB1-203ENST00000379933 CHMP4BQ9H444 224 aaKnown RBP24.65■■□□□ 1.54
RREB1-203ENST00000379933 U2SURPO15042 1029 aaKnown RBP24.65■■□□□ 1.54
RREB1-203ENST00000379933 SOGA1O94964 1423 aa24.64■■□□□ 1.54
RREB1-203ENST00000379933 NCLP19338 710 aaKnown RBP24.63■■□□□ 1.53
RREB1-203ENST00000379933 HDGFL2Q7Z4V5 671 aaPredicted RBP24.62■■□□□ 1.53
RREB1-203ENST00000379933 TNNT2P45379 298 aaPredicted RBP24.62■■□□□ 1.53
RREB1-203ENST00000379933 TMF1P82094 1093 aa24.62■■□□□ 1.53
RREB1-203ENST00000379933 TULP1O00294 542 aaPredicted RBP24.61■■□□□ 1.53
RREB1-203ENST00000379933 NEUROD2Q15784 382 aa24.59■■□□□ 1.53
RREB1-203ENST00000379933 HIRIP3Q9BW71 556 aaPredicted RBP24.59■■□□□ 1.53
RREB1-203ENST00000379933 STK26Q9P289 416 aa24.59■■□□□ 1.53
RREB1-203ENST00000379933 SAFB2Q14151 953 aaKnown RBP eCLIP24.58■■□□□ 1.52
RREB1-203ENST00000379933 RTF1Q92541 710 aaKnown RBP24.57■■□□□ 1.52
RREB1-203ENST00000379933 ZRSR1Q15695 479 aaKnown RBP24.56■■□□□ 1.52
RREB1-203ENST00000379933 TNIKQ9UKE5 1360 aa24.55■■□□□ 1.52
RREB1-203ENST00000379933 DCAF11Q8TEB1 546 aa24.54■■□□□ 1.52
RREB1-203ENST00000379933 OSCARQ8IYS5 282 aa24.54■■□□□ 1.52
RREB1-203ENST00000379933 MS4A1P11836 297 aa24.51■■□□□ 1.51
RREB1-203ENST00000379933 TDRD9Q8NDG6 1382 aaKnown RBP24.5■■□□□ 1.51
RREB1-203ENST00000379933 GLIPR1L2Q4G1C9 344 aa24.49■■□□□ 1.51
RREB1-203ENST00000379933 CYB5RLQ6IPT4 315 aa24.48■■□□□ 1.51
RREB1-203ENST00000379933 MORC1Q86VD1 984 aa24.47■■□□□ 1.51
RREB1-203ENST00000379933 FGD1P98174 961 aa24.44■■□□□ 1.5
RREB1-203ENST00000379933 BECN1Q14457 450 aa24.44■■□□□ 1.5
RREB1-203ENST00000379933 ISY1Q9ULR0 285 aaKnown RBP24.44■■□□□ 1.5
RREB1-203ENST00000379933 CC2D1BQ5T0F9 858 aaKnown RBP24.43■■□□□ 1.5
RREB1-203ENST00000379933 KIF3BO15066 747 aa24.43■■□□□ 1.5
RREB1-203ENST00000379933 WASHC2CQ9Y4E1 1318 aa24.43■■□□□ 1.5
RREB1-203ENST00000379933 ZNF330Q9Y3S2 320 aaPredicted RBP24.41■■□□□ 1.5
RREB1-203ENST00000379933 MEX3CQ5U5Q3 659 aaKnown RBP24.41■■□□□ 1.5
RREB1-203ENST00000379933 SPAG9O60271 1321 aaKnown RBP24.4■■□□□ 1.5
RREB1-203ENST00000379933 CHMP4AQ9BY43 222 aa24.4■■□□□ 1.5
RREB1-203ENST00000379933 KCNJ4P48050 445 aa24.39■■□□□ 1.5
RREB1-203ENST00000379933 GOLGA6L22H0YM25 854 aa24.39■■□□□ 1.49
RREB1-203ENST00000379933 G3V3G9 751 aa24.38■■□□□ 1.49
RREB1-203ENST00000379933 DCAF8Q5TAQ9 597 aa24.38■■□□□ 1.49
RREB1-203ENST00000379933 NGDNQ8NEJ9 315 aaKnown RBP24.37■■□□□ 1.49
RREB1-203ENST00000379933 ARHGAP35Q9NRY4 1499 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms