RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ANP32BQ92688 251 aaKnown RBP14.62□□□□□ -0.07
LINC00654-201ENST00000379053 LMOD2Q6P5Q4 547 aa14.61□□□□□ -0.07
LINC00654-201ENST00000379053 RRP7BPQ9NSQ0 103 aa14.6□□□□□ -0.07
LINC00654-201ENST00000379053 MYH16Q9H6N6 1097 aa14.6□□□□□ -0.07
LINC00654-201ENST00000379053 FOXD1Q16676 465 aa14.59□□□□□ -0.07
LINC00654-201ENST00000379053 RGL3Q3MIN7 710 aa14.58□□□□□ -0.08
LINC00654-201ENST00000379053 EIF5BO60841 1220 aaKnown RBP14.58□□□□□ -0.08
LINC00654-201ENST00000379053 ACIN1Q9UKV3 1341 aaKnown RBP14.57□□□□□ -0.08
LINC00654-201ENST00000379053 MRS2Q9HD23 443 aa14.54□□□□□ -0.08
LINC00654-201ENST00000379053 CFDP1Q9UEE9 299 aaPredicted RBP14.54□□□□□ -0.08
LINC00654-201ENST00000379053 PPM1GO15355 546 aaPredicted RBP14.53□□□□□ -0.08
LINC00654-201ENST00000379053 HDGFP51858 240 aaKnown RBP14.53□□□□□ -0.08
LINC00654-201ENST00000379053 NPHP1O15259 732 aa14.52□□□□□ -0.09
LINC00654-201ENST00000379053 FKBP8Q14318 412 aa14.52□□□□□ -0.09
LINC00654-201ENST00000379053 CDK11BP21127 795 aaKnown RBP14.52□□□□□ -0.09
LINC00654-201ENST00000379053 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
LINC00654-201ENST00000379053 CFAP53Q96M91 514 aa14.49□□□□□ -0.09
LINC00654-201ENST00000379053 POGKQ9P215 609 aa14.49□□□□□ -0.09
LINC00654-201ENST00000379053 CCDC136Q96JN2 1154 aa14.48□□□□□ -0.09
LINC00654-201ENST00000379053 EIF4G2P78344 907 aaKnown RBP eCLIP14.47□□□□□ -0.09
LINC00654-201ENST00000379053 MLECQ14165 292 aa14.47□□□□□ -0.09
LINC00654-201ENST00000379053 CLIP1P30622 1438 aa14.47□□□□□ -0.09
LINC00654-201ENST00000379053 CDCA8Q53HL2 280 aa14.44□□□□□ -0.1
LINC00654-201ENST00000379053 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
LINC00654-201ENST00000379053 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
LINC00654-201ENST00000379053 KNSTRNQ9Y448 316 aa14.41□□□□□ -0.1
LINC00654-201ENST00000379053 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
LINC00654-201ENST00000379053 GLIPR1L2Q4G1C9 344 aa14.37□□□□□ -0.11
LINC00654-201ENST00000379053 LAS1LQ9Y4W2 734 aaKnown RBP14.37□□□□□ -0.11
LINC00654-201ENST00000379053 MAPK8IP3Q9UPT6 1336 aa14.36□□□□□ -0.11
LINC00654-201ENST00000379053 PHF23Q9BUL5 403 aaPredicted RBP14.36□□□□□ -0.11
LINC00654-201ENST00000379053 CARD11Q9BXL7 1154 aa14.36□□□□□ -0.11
LINC00654-201ENST00000379053 NUDCQ9Y266 331 aa14.35□□□□□ -0.11
LINC00654-201ENST00000379053 TULP1O00294 542 aaPredicted RBP14.34□□□□□ -0.11
LINC00654-201ENST00000379053 KIF27Q86VH2 1401 aa14.34□□□□□ -0.11
LINC00654-201ENST00000379053 NEUROD2Q15784 382 aa14.33□□□□□ -0.11
LINC00654-201ENST00000379053 TNNT2P45379 298 aaPredicted RBP14.31□□□□□ -0.12
LINC00654-201ENST00000379053 SOX12O15370 315 aa14.31□□□□□ -0.12
LINC00654-201ENST00000379053 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
LINC00654-201ENST00000379053 FTSJ3Q8IY81 847 aaKnown RBP14.3□□□□□ -0.12
LINC00654-201ENST00000379053 KANK1Q14678 1352 aa14.3□□□□□ -0.12
LINC00654-201ENST00000379053 NCLP19338 710 aaKnown RBP14.28□□□□□ -0.12
LINC00654-201ENST00000379053 IRX6P78412 446 aaPredicted RBP14.28□□□□□ -0.12
LINC00654-201ENST00000379053 GOLGA3Q08378 1498 aa14.28□□□□□ -0.12
LINC00654-201ENST00000379053 GOLGA2Q08379 1002 aa14.28□□□□□ -0.12
LINC00654-201ENST00000379053 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
LINC00654-201ENST00000379053 CCDC9Q9Y3X0 531 aaKnown RBP14.28□□□□□ -0.12
LINC00654-201ENST00000379053 SENP3-EIF4A1A0A087X0R7 540 aa14.28□□□□□ -0.12
LINC00654-201ENST00000379053 CCNB3Q8WWL7 1395 aa14.27□□□□□ -0.12
LINC00654-201ENST00000379053 GGT6Q6P531 493 aa14.27□□□□□ -0.13
LINC00654-201ENST00000379053 U2SURPO15042 1029 aaKnown RBP14.27□□□□□ -0.13
LINC00654-201ENST00000379053 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
LINC00654-201ENST00000379053 CASC1Q6TDU7 716 aa14.26□□□□□ -0.13
LINC00654-201ENST00000379053 EEA1Q15075 1411 aa14.26□□□□□ -0.13
LINC00654-201ENST00000379053 OS9Q13438 667 aaPredicted RBP14.26□□□□□ -0.13
LINC00654-201ENST00000379053 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
LINC00654-201ENST00000379053 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
LINC00654-201ENST00000379053 ZRSR1Q15695 479 aaKnown RBP14.24□□□□□ -0.13
LINC00654-201ENST00000379053 NACADO15069 1562 aa14.24□□□□□ -0.13
LINC00654-201ENST00000379053 SRPK2P78362 688 aaKnown RBP14.24□□□□□ -0.13
LINC00654-201ENST00000379053 TAOK2Q9UL54 1235 aa14.24□□□□□ -0.13
LINC00654-201ENST00000379053 SAFB2Q14151 953 aaKnown RBP eCLIP14.23□□□□□ -0.13
LINC00654-201ENST00000379053 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
LINC00654-201ENST00000379053 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.14
LINC00654-201ENST00000379053 BECN1Q14457 450 aa14.2□□□□□ -0.14
LINC00654-201ENST00000379053 NBR1Q14596 966 aa14.2□□□□□ -0.14
LINC00654-201ENST00000379053 CEP162Q5TB80 1403 aa14.19□□□□□ -0.14
LINC00654-201ENST00000379053 PNNQ9H307 717 aaKnown RBP14.19□□□□□ -0.14
LINC00654-201ENST00000379053 CSB-PGBD3P0DP91 1061 aa14.18□□□□□ -0.14
LINC00654-201ENST00000379053 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
LINC00654-201ENST00000379053 CC2D1BQ5T0F9 858 aaKnown RBP14.18□□□□□ -0.14
LINC00654-201ENST00000379053 STK26Q9P289 416 aa14.18□□□□□ -0.14
LINC00654-201ENST00000379053 GOLGA6L22H0YM25 854 aa14.18□□□□□ -0.14
LINC00654-201ENST00000379053 FGD1P98174 961 aa14.18□□□□□ -0.14
LINC00654-201ENST00000379053 DCAF11Q8TEB1 546 aa14.17□□□□□ -0.14
LINC00654-201ENST00000379053 TPRNQ4KMQ1 711 aa14.17□□□□□ -0.14
LINC00654-201ENST00000379053 FRAT1Q92837 279 aaPredicted RBP14.17□□□□□ -0.14
LINC00654-201ENST00000379053 CYB5RLQ6IPT4 315 aa14.17□□□□□ -0.14
LINC00654-201ENST00000379053 DCAF1Q9Y4B6 1507 aa14.17□□□□□ -0.14
LINC00654-201ENST00000379053 TMF1P82094 1093 aa14.15□□□□□ -0.14
LINC00654-201ENST00000379053 EID1Q9Y6B2 187 aa14.15□□□□□ -0.14
LINC00654-201ENST00000379053 CHMP4BQ9H444 224 aaKnown RBP14.15□□□□□ -0.14
LINC00654-201ENST00000379053 KCNJ4P48050 445 aa14.14□□□□□ -0.15
LINC00654-201ENST00000379053 ISY1Q9ULR0 285 aaKnown RBP14.14□□□□□ -0.15
LINC00654-201ENST00000379053 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
LINC00654-201ENST00000379053 NAP1L2Q9ULW6 460 aaPredicted RBP14.14□□□□□ -0.15
LINC00654-201ENST00000379053 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
LINC00654-201ENST00000379053 RTF1Q92541 710 aaKnown RBP14.13□□□□□ -0.15
LINC00654-201ENST00000379053 ZNF330Q9Y3S2 320 aaPredicted RBP14.12□□□□□ -0.15
LINC00654-201ENST00000379053 MIER1Q8N108 512 aa14.12□□□□□ -0.15
LINC00654-201ENST00000379053 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
LINC00654-201ENST00000379053 CARMIL2Q6F5E8 1435 aa14.11□□□□□ -0.15
LINC00654-201ENST00000379053 CUX2O14529 1486 aa14.11□□□□□ -0.15
LINC00654-201ENST00000379053 MORC1Q86VD1 984 aa14.11□□□□□ -0.15
LINC00654-201ENST00000379053 HDGFL2Q7Z4V5 671 aaPredicted RBP14.1□□□□□ -0.15
LINC00654-201ENST00000379053 DDRGK1Q96HY6 314 aa14.1□□□□□ -0.15
LINC00654-201ENST00000379053 MS4A1P11836 297 aa14.09□□□□□ -0.15
LINC00654-201ENST00000379053 SIN3AQ96ST3 1273 aa14.09□□□□□ -0.15
LINC00654-201ENST00000379053 FHAD1B1AJZ9 1412 aa14.09□□□□□ -0.15
LINC00654-201ENST00000379053 EFCAB2Q5VUJ9 269 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms