RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 GOLGA6L3A6NEY3 463 aa11.62□□□□□ -0.55
ABCA1-202ENST00000374736 GOLGA6L22H0YM25 854 aa11.62□□□□□ -0.55
ABCA1-202ENST00000374736 ARID3AQ99856 593 aa11.62□□□□□ -0.55
ABCA1-202ENST00000374736 SUPT5HO00267 1087 aaKnown RBP11.61□□□□□ -0.55
ABCA1-202ENST00000374736 BCCIPQ9P287 314 aaKnown RBP eCLIP11.61□□□□□ -0.55
ABCA1-202ENST00000374736 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
ABCA1-202ENST00000374736 CLSTN1O94985 981 aa11.6□□□□□ -0.55
ABCA1-202ENST00000374736 RRP9O43818 475 aaKnown RBP11.6□□□□□ -0.55
ABCA1-202ENST00000374736 PSMD1Q99460 953 aa11.59□□□□□ -0.55
ABCA1-202ENST00000374736 GOLGA6L6A8MZA4 724 aa11.59□□□□□ -0.55
ABCA1-202ENST00000374736 DCAF1Q9Y4B6 1507 aa11.58□□□□□ -0.56
ABCA1-202ENST00000374736 AXDND1Q5T1B0 1012 aaPredicted RBP11.57□□□□□ -0.56
ABCA1-202ENST00000374736 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
ABCA1-202ENST00000374736 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
ABCA1-202ENST00000374736 CHAF1AQ13111 956 aaPredicted RBP11.55□□□□□ -0.56
ABCA1-202ENST00000374736 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
ABCA1-202ENST00000374736 GOLGA6L1Q8N7Z2 621 aa11.51□□□□□ -0.57
ABCA1-202ENST00000374736 TSPYL1Q9H0U9 437 aa11.51□□□□□ -0.57
ABCA1-202ENST00000374736 ZBTB7CA1YPR0 619 aa11.5□□□□□ -0.57
ABCA1-202ENST00000374736 PATL2C9JE40 543 aaKnown RBP11.49□□□□□ -0.57
ABCA1-202ENST00000374736 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
ABCA1-202ENST00000374736 BECN1Q14457 450 aa11.48□□□□□ -0.57
ABCA1-202ENST00000374736 SSR1P43307 286 aaKnown RBP11.47□□□□□ -0.57
ABCA1-202ENST00000374736 SETQ01105 290 aaPredicted RBP11.46□□□□□ -0.57
ABCA1-202ENST00000374736 NEFHP12036 1026 aa11.46□□□□□ -0.58
ABCA1-202ENST00000374736 MSNP26038 577 aaKnown RBP11.45□□□□□ -0.58
ABCA1-202ENST00000374736 CCDC66A2RUB6 948 aa11.45□□□□□ -0.58
ABCA1-202ENST00000374736 CC2D1BQ5T0F9 858 aaKnown RBP11.45□□□□□ -0.58
ABCA1-202ENST00000374736 CLGNO14967 610 aa11.43□□□□□ -0.58
ABCA1-202ENST00000374736 TIMELESSQ9UNS1 1208 aa11.42□□□□□ -0.58
ABCA1-202ENST00000374736 FKBP8Q14318 412 aa11.42□□□□□ -0.58
ABCA1-202ENST00000374736 NOM1Q5C9Z4 860 aaKnown RBP11.41□□□□□ -0.58
ABCA1-202ENST00000374736 PLCD4Q9BRC7 762 aa11.41□□□□□ -0.58
ABCA1-202ENST00000374736 STK11IPQ8N1F8 1099 aa11.39□□□□□ -0.59
ABCA1-202ENST00000374736 PLPPR3Q6T4P5 718 aa11.39□□□□□ -0.59
ABCA1-202ENST00000374736 ANO8Q9HCE9 1232 aaPredicted RBP11.39□□□□□ -0.59
ABCA1-202ENST00000374736 ANP32CO43423 234 aa11.38□□□□□ -0.59
ABCA1-202ENST00000374736 FANCIQ9NVI1 1328 aa11.37□□□□□ -0.59
ABCA1-202ENST00000374736 ZNF526Q8TF50 670 aaPredicted RBP11.36□□□□□ -0.59
ABCA1-202ENST00000374736 TPM2P07951 284 aa11.36□□□□□ -0.59
ABCA1-202ENST00000374736 IRX3P78415 501 aaPredicted RBP11.33□□□□□ -0.6
ABCA1-202ENST00000374736 RBM19Q9Y4C8 960 aaKnown RBP11.33□□□□□ -0.6
ABCA1-202ENST00000374736 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
ABCA1-202ENST00000374736 FGD1P98174 961 aa11.3□□□□□ -0.6
ABCA1-202ENST00000374736 SUPT16HQ9Y5B9 1047 aaKnown RBP11.29□□□□□ -0.6
ABCA1-202ENST00000374736 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
ABCA1-202ENST00000374736 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
ABCA1-202ENST00000374736 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
ABCA1-202ENST00000374736 RBM28Q9NW13 759 aaKnown RBP11.27□□□□□ -0.61
ABCA1-202ENST00000374736 CWC15Q9P013 229 aaKnown RBP11.26□□□□□ -0.61
ABCA1-202ENST00000374736 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.26□□□□□ -0.61
ABCA1-202ENST00000374736 ZNF622Q969S3 477 aaKnown RBP eCLIP11.25□□□□□ -0.61
ABCA1-202ENST00000374736 BBXQ8WY36 941 aaPredicted RBP11.25□□□□□ -0.61
ABCA1-202ENST00000374736 NRDCO43847 1150 aa11.25□□□□□ -0.61
ABCA1-202ENST00000374736 PAIP2Q9BPZ3 127 aaKnown RBP11.23□□□□□ -0.61
ABCA1-202ENST00000374736 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
ABCA1-202ENST00000374736 SALL2Q9Y467 1007 aaPredicted RBP11.23□□□□□ -0.61
ABCA1-202ENST00000374736 GPS2Q13227 327 aa11.22□□□□□ -0.61
ABCA1-202ENST00000374736 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
ABCA1-202ENST00000374736 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.22□□□□□ -0.61
ABCA1-202ENST00000374736 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
ABCA1-202ENST00000374736 OS9Q13438 667 aaPredicted RBP11.22□□□□□ -0.61
ABCA1-202ENST00000374736 GSE1Q14687 1217 aa11.21□□□□□ -0.61
ABCA1-202ENST00000374736 DNAJC2Q99543 621 aaKnown RBP11.2□□□□□ -0.62
ABCA1-202ENST00000374736 ZNF771Q7L3S4 317 aaPredicted RBP11.2□□□□□ -0.62
ABCA1-202ENST00000374736 KIAA2012Q0VF49 1180 aa11.19□□□□□ -0.62
ABCA1-202ENST00000374736 TEX35Q5T0J7 233 aa11.19□□□□□ -0.62
ABCA1-202ENST00000374736 NAP1L2Q9ULW6 460 aaPredicted RBP11.19□□□□□ -0.62
ABCA1-202ENST00000374736 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
ABCA1-202ENST00000374736 WWC1Q8IX03 1113 aa11.18□□□□□ -0.62
ABCA1-202ENST00000374736 SETSIPP0DME0 302 aa11.18□□□□□ -0.62
ABCA1-202ENST00000374736 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
ABCA1-202ENST00000374736 RBM10P98175 930 aaKnown RBP11.17□□□□□ -0.62
ABCA1-202ENST00000374736 PDCL3Q9H2J4 239 aa11.17□□□□□ -0.62
ABCA1-202ENST00000374736 USP8P40818 1118 aa11.17□□□□□ -0.62
ABCA1-202ENST00000374736 FTSJ3Q8IY81 847 aaKnown RBP11.17□□□□□ -0.62
ABCA1-202ENST00000374736 MNS1Q8NEH6 495 aa11.17□□□□□ -0.62
ABCA1-202ENST00000374736 MCCP23508 829 aa11.16□□□□□ -0.62
ABCA1-202ENST00000374736 HTATSF1O43719 755 aaKnown RBP11.16□□□□□ -0.62
ABCA1-202ENST00000374736 FAM193AP78312 1265 aa11.15□□□□□ -0.62
ABCA1-202ENST00000374736 CTR9Q6PD62 1173 aa11.15□□□□□ -0.62
ABCA1-202ENST00000374736 IPO9Q96P70 1041 aaKnown RBP11.15□□□□□ -0.62
ABCA1-202ENST00000374736 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
ABCA1-202ENST00000374736 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
ABCA1-202ENST00000374736 HIRIP3Q9BW71 556 aaPredicted RBP11.14□□□□□ -0.63
ABCA1-202ENST00000374736 DEF6Q9H4E7 631 aa11.13□□□□□ -0.63
ABCA1-202ENST00000374736 IPO4Q8TEX9 1081 aaKnown RBP11.13□□□□□ -0.63
ABCA1-202ENST00000374736 TMX4Q9H1E5 349 aaPredicted RBP11.13□□□□□ -0.63
ABCA1-202ENST00000374736 PPP4R2Q9NY27 417 aa11.13□□□□□ -0.63
ABCA1-202ENST00000374736 KAT6BQ8WYB5 2073 aa11.12□□□□□ -0.63
ABCA1-202ENST00000374736 MRVI1Q9Y6F6 885 aa11.11□□□□□ -0.63
ABCA1-202ENST00000374736 GOLGA6L4A6NEF3 574 aa11.1□□□□□ -0.63
ABCA1-202ENST00000374736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
ABCA1-202ENST00000374736 CALD1Q05682 793 aaKnown RBP11.1□□□□□ -0.63
ABCA1-202ENST00000374736 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
ABCA1-202ENST00000374736 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
ABCA1-202ENST00000374736 HMGN5P82970 282 aaKnown RBP11.08□□□□□ -0.64
ABCA1-202ENST00000374736 MYH16Q9H6N6 1097 aa11.07□□□□□ -0.64
ABCA1-202ENST00000374736 GPATCH11Q8N954 259 aa11.07□□□□□ -0.64
ABCA1-202ENST00000374736 KIF3AQ9Y496 699 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms