RNA–Protein interactions for RNA: ENST00000373201.5

PTPRT-207, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-207ENST00000373201 TMC1Q8TDI8 760 aa12.03□□□□□ -0.48
PTPRT-207ENST00000373201 HNRNPUQ00839 825 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPRT-207ENST00000373201 CCDC136Q96JN2 1154 aa12.02□□□□□ -0.48
PTPRT-207ENST00000373201 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.49
PTPRT-207ENST00000373201 TONSLQ96HA7 1378 aa12.02□□□□□ -0.49
PTPRT-207ENST00000373201 PTMAP06454 111 aaKnown RBP12.02□□□□□ -0.49
PTPRT-207ENST00000373201 TRIM44Q96DX7 344 aaPredicted RBP12.01□□□□□ -0.49
PTPRT-207ENST00000373201 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
PTPRT-207ENST00000373201 FKBP8Q14318 412 aa12□□□□□ -0.49
PTPRT-207ENST00000373201 KAT6BQ8WYB5 2073 aa11.98□□□□□ -0.49
PTPRT-207ENST00000373201 DNTTIP2Q5QJE6 756 aaKnown RBP11.98□□□□□ -0.49
PTPRT-207ENST00000373201 CHIC2Q9UKJ5 165 aa11.96□□□□□ -0.49
PTPRT-207ENST00000373201 FGD1P98174 961 aa11.96□□□□□ -0.5
PTPRT-207ENST00000373201 CASC1Q6TDU7 716 aa11.96□□□□□ -0.5
PTPRT-207ENST00000373201 GOLGA6L22H0YM25 854 aa11.95□□□□□ -0.5
PTPRT-207ENST00000373201 TNNT2P45379 298 aaPredicted RBP11.94□□□□□ -0.5
PTPRT-207ENST00000373201 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
PTPRT-207ENST00000373201 OS9Q13438 667 aaPredicted RBP11.93□□□□□ -0.5
PTPRT-207ENST00000373201 BECN1Q14457 450 aa11.91□□□□□ -0.5
PTPRT-207ENST00000373201 PLCB2Q00722 1185 aa11.91□□□□□ -0.5
PTPRT-207ENST00000373201 KRI1Q8N9T8 703 aaKnown RBP11.9□□□□□ -0.5
PTPRT-207ENST00000373201 DDX10Q13206 875 aaKnown RBP11.89□□□□□ -0.51
PTPRT-207ENST00000373201 KCNH8Q96L42 1107 aa11.89□□□□□ -0.51
PTPRT-207ENST00000373201 TRHP20396 242 aaPredicted RBP11.89□□□□□ -0.51
PTPRT-207ENST00000373201 FTSJ3Q8IY81 847 aaKnown RBP11.88□□□□□ -0.51
PTPRT-207ENST00000373201 KCNJ4P48050 445 aa11.88□□□□□ -0.51
PTPRT-207ENST00000373201 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
PTPRT-207ENST00000373201 IRX6P78412 446 aaPredicted RBP11.87□□□□□ -0.51
PTPRT-207ENST00000373201 GOLGA6L6A8MZA4 724 aa11.87□□□□□ -0.51
PTPRT-207ENST00000373201 TSPY4P0CV99 314 aa11.86□□□□□ -0.51
PTPRT-207ENST00000373201 TSPY10P0CW01 314 aa11.86□□□□□ -0.51
PTPRT-207ENST00000373201 PDE4CQ08493 712 aa11.86□□□□□ -0.51
PTPRT-207ENST00000373201 MRS2Q9HD23 443 aa11.85□□□□□ -0.51
PTPRT-207ENST00000373201 SENP3-EIF4A1A0A087X0R7 540 aa11.84□□□□□ -0.51
PTPRT-207ENST00000373201 NOC3LQ8WTT2 800 aaKnown RBP11.83□□□□□ -0.52
PTPRT-207ENST00000373201 CHMP7Q8WUX9 453 aaPredicted RBP11.83□□□□□ -0.52
PTPRT-207ENST00000373201 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
PTPRT-207ENST00000373201 TMX4Q9H1E5 349 aaPredicted RBP11.81□□□□□ -0.52
PTPRT-207ENST00000373201 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
PTPRT-207ENST00000373201 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
PTPRT-207ENST00000373201 SOX12O15370 315 aa11.8□□□□□ -0.52
PTPRT-207ENST00000373201 NRDCO43847 1150 aa11.79□□□□□ -0.52
PTPRT-207ENST00000373201 KIAA2012Q0VF49 1180 aa11.79□□□□□ -0.52
PTPRT-207ENST00000373201 GNL2Q13823 731 aaKnown RBP11.79□□□□□ -0.52
PTPRT-207ENST00000373201 RGL3Q3MIN7 710 aa11.78□□□□□ -0.52
PTPRT-207ENST00000373201 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
PTPRT-207ENST00000373201 PNNQ9H307 717 aaKnown RBP11.78□□□□□ -0.52
PTPRT-207ENST00000373201 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
PTPRT-207ENST00000373201 NEUROD2Q15784 382 aa11.78□□□□□ -0.52
PTPRT-207ENST00000373201 ERICH6BQ5W0A0 696 aa11.78□□□□□ -0.52
PTPRT-207ENST00000373201 POGKQ9P215 609 aa11.77□□□□□ -0.53
PTPRT-207ENST00000373201 ANP32EQ9BTT0 268 aa11.77□□□□□ -0.53
PTPRT-207ENST00000373201 ZNF330Q9Y3S2 320 aaPredicted RBP11.77□□□□□ -0.53
PTPRT-207ENST00000373201 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
PTPRT-207ENST00000373201 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
PTPRT-207ENST00000373201 GOLGA6L4A6NEF3 574 aa11.75□□□□□ -0.53
PTPRT-207ENST00000373201 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTPRT-207ENST00000373201 NAP1L5Q96NT1 182 aaPredicted RBP11.74□□□□□ -0.53
PTPRT-207ENST00000373201 CCDC9Q9Y3X0 531 aaKnown RBP11.74□□□□□ -0.53
PTPRT-207ENST00000373201 G3V3G9 751 aa11.73□□□□□ -0.53
PTPRT-207ENST00000373201 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
PTPRT-207ENST00000373201 HSP90AB1P08238 724 aaKnown RBP11.73□□□□□ -0.53
PTPRT-207ENST00000373201 DRC7Q8IY82 874 aa11.73□□□□□ -0.53
PTPRT-207ENST00000373201 ACIN1Q9UKV3 1341 aaKnown RBP11.72□□□□□ -0.53
PTPRT-207ENST00000373201 L1TD1Q5T7N2 865 aaKnown RBP11.71□□□□□ -0.54
PTPRT-207ENST00000373201 KNSTRNQ9Y448 316 aa11.71□□□□□ -0.54
PTPRT-207ENST00000373201 CHAF1AQ13111 956 aaPredicted RBP11.71□□□□□ -0.54
PTPRT-207ENST00000373201 MLECQ14165 292 aa11.71□□□□□ -0.54
PTPRT-207ENST00000373201 RRP7BPQ9NSQ0 103 aa11.69□□□□□ -0.54
PTPRT-207ENST00000373201 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
PTPRT-207ENST00000373201 FRAT1Q92837 279 aaPredicted RBP11.69□□□□□ -0.54
PTPRT-207ENST00000373201 U2SURPO15042 1029 aaKnown RBP11.68□□□□□ -0.54
PTPRT-207ENST00000373201 MTUS2Q5JR59 1369 aa11.68□□□□□ -0.54
PTPRT-207ENST00000373201 VPS53Q5VIR6 699 aa11.68□□□□□ -0.54
PTPRT-207ENST00000373201 A0A0U1RQG5 324 aaPredicted RBP11.68□□□□□ -0.54
PTPRT-207ENST00000373201 PAK3O75914 559 aaPredicted RBP11.66□□□□□ -0.54
PTPRT-207ENST00000373201 CSRNP3Q8WYN3 585 aa11.66□□□□□ -0.54
PTPRT-207ENST00000373201 NUDCQ9Y266 331 aa11.66□□□□□ -0.54
PTPRT-207ENST00000373201 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.55
PTPRT-207ENST00000373201 RGS3P49796 1198 aa11.64□□□□□ -0.55
PTPRT-207ENST00000373201 WWC1Q8IX03 1113 aa11.64□□□□□ -0.55
PTPRT-207ENST00000373201 CDCA8Q53HL2 280 aa11.63□□□□□ -0.55
PTPRT-207ENST00000373201 CREBRFQ8IUR6 639 aa11.63□□□□□ -0.55
PTPRT-207ENST00000373201 SCRIBQ14160 1630 aa11.63□□□□□ -0.55
PTPRT-207ENST00000373201 CHMP3Q9Y3E7 222 aa11.63□□□□□ -0.55
PTPRT-207ENST00000373201 MCCP23508 829 aa11.62□□□□□ -0.55
PTPRT-207ENST00000373201 APBB1O00213 710 aa11.61□□□□□ -0.55
PTPRT-207ENST00000373201 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
PTPRT-207ENST00000373201 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
PTPRT-207ENST00000373201 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
PTPRT-207ENST00000373201 KIAA1211Q6ZU35 1233 aa11.6□□□□□ -0.55
PTPRT-207ENST00000373201 SAFB2Q14151 953 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTPRT-207ENST00000373201 TAF7LQ5H9L4 462 aa11.59□□□□□ -0.55
PTPRT-207ENST00000373201 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
PTPRT-207ENST00000373201 PLEKHD1A6NEE1 506 aa11.59□□□□□ -0.55
PTPRT-207ENST00000373201 CHMP4BQ9H444 224 aaKnown RBP11.58□□□□□ -0.56
PTPRT-207ENST00000373201 CC2D1BQ5T0F9 858 aaKnown RBP11.57□□□□□ -0.56
PTPRT-207ENST00000373201 GORABQ5T7V8 394 aa11.57□□□□□ -0.56
PTPRT-207ENST00000373201 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
PTPRT-207ENST00000373201 HSCBQ8IWL3 235 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms