RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 BECN1Q14457 450 aa20.66■□□□□ 0.9
CHST3-201ENST00000373115 RTN4Q9NQC3 1192 aaKnown RBP20.66■□□□□ 0.9
CHST3-201ENST00000373115 DDRGK1Q96HY6 314 aa20.65■□□□□ 0.9
CHST3-201ENST00000373115 PTMAP06454 111 aaKnown RBP20.63■□□□□ 0.89
CHST3-201ENST00000373115 TULP1O00294 542 aaPredicted RBP20.62■□□□□ 0.89
CHST3-201ENST00000373115 DNTTIP2Q5QJE6 756 aaKnown RBP20.62■□□□□ 0.89
CHST3-201ENST00000373115 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
CHST3-201ENST00000373115 GOLGA6L22H0YM25 854 aa20.57■□□□□ 0.88
CHST3-201ENST00000373115 NAP1L5Q96NT1 182 aaPredicted RBP20.56■□□□□ 0.88
CHST3-201ENST00000373115 LAS1LQ9Y4W2 734 aaKnown RBP20.52■□□□□ 0.87
CHST3-201ENST00000373115 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
CHST3-201ENST00000373115 TAOK2Q9UL54 1235 aa20.51■□□□□ 0.87
CHST3-201ENST00000373115 ZRSR1Q15695 479 aaKnown RBP20.5■□□□□ 0.87
CHST3-201ENST00000373115 ANP32EQ9BTT0 268 aa20.48■□□□□ 0.87
CHST3-201ENST00000373115 PLCB2Q00722 1185 aa20.46■□□□□ 0.87
CHST3-201ENST00000373115 SUPT16HQ9Y5B9 1047 aaKnown RBP20.43■□□□□ 0.86
CHST3-201ENST00000373115 NPM1P06748 294 aaKnown RBP eCLIP20.4■□□□□ 0.86
CHST3-201ENST00000373115 CASC1Q6TDU7 716 aa20.4■□□□□ 0.86
CHST3-201ENST00000373115 AMER1Q5JTC6 1135 aaPredicted RBP20.4■□□□□ 0.86
CHST3-201ENST00000373115 EIF4G2P78344 907 aaKnown RBP eCLIP20.4■□□□□ 0.86
CHST3-201ENST00000373115 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
CHST3-201ENST00000373115 FTSJ3Q8IY81 847 aaKnown RBP20.37■□□□□ 0.85
CHST3-201ENST00000373115 ERICH6BQ5W0A0 696 aa20.36■□□□□ 0.85
CHST3-201ENST00000373115 PPM1GO15355 546 aaPredicted RBP20.36■□□□□ 0.85
CHST3-201ENST00000373115 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
CHST3-201ENST00000373115 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
CHST3-201ENST00000373115 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
CHST3-201ENST00000373115 RGS3P49796 1198 aa20.33■□□□□ 0.85
CHST3-201ENST00000373115 NEUROD2Q15784 382 aa20.32■□□□□ 0.84
CHST3-201ENST00000373115 RGL3Q3MIN7 710 aa20.3■□□□□ 0.84
CHST3-201ENST00000373115 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
CHST3-201ENST00000373115 HSP90AB1P08238 724 aaKnown RBP20.29■□□□□ 0.84
CHST3-201ENST00000373115 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
CHST3-201ENST00000373115 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
CHST3-201ENST00000373115 ARID4BQ4LE39 1312 aaPredicted RBP20.25■□□□□ 0.83
CHST3-201ENST00000373115 FRAT1Q92837 279 aaPredicted RBP20.25■□□□□ 0.83
CHST3-201ENST00000373115 NAP1L2Q9ULW6 460 aaPredicted RBP20.24■□□□□ 0.83
CHST3-201ENST00000373115 CFAP53Q96M91 514 aa20.23■□□□□ 0.83
CHST3-201ENST00000373115 SPRYD3Q8NCJ5 442 aa20.22■□□□□ 0.83
CHST3-201ENST00000373115 GOLGA6L6A8MZA4 724 aa20.2■□□□□ 0.82
CHST3-201ENST00000373115 KNSTRNQ9Y448 316 aa20.2■□□□□ 0.82
CHST3-201ENST00000373115 HAP1P54257 671 aaPredicted RBP20.2■□□□□ 0.82
CHST3-201ENST00000373115 NCBP3Q53F19 620 aaKnown RBP20.18■□□□□ 0.82
CHST3-201ENST00000373115 B4GALNT3Q6L9W6 998 aa20.18■□□□□ 0.82
CHST3-201ENST00000373115 FGD1P98174 961 aa20.17■□□□□ 0.82
CHST3-201ENST00000373115 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
CHST3-201ENST00000373115 PPP4R2Q9NY27 417 aa20.16■□□□□ 0.82
CHST3-201ENST00000373115 OS9Q13438 667 aaPredicted RBP20.16■□□□□ 0.82
CHST3-201ENST00000373115 KCNH8Q96L42 1107 aa20.14■□□□□ 0.81
CHST3-201ENST00000373115 MAPK8IP3Q9UPT6 1336 aa20.13■□□□□ 0.81
CHST3-201ENST00000373115 KCNJ4P48050 445 aa20.13■□□□□ 0.81
CHST3-201ENST00000373115 CC2D1BQ5T0F9 858 aaKnown RBP20.13■□□□□ 0.81
CHST3-201ENST00000373115 ARID3AQ99856 593 aa20.12■□□□□ 0.81
CHST3-201ENST00000373115 MSNP26038 577 aaKnown RBP20.12■□□□□ 0.81
CHST3-201ENST00000373115 DEKP35659 375 aaKnown RBP20.11■□□□□ 0.81
CHST3-201ENST00000373115 DRC7Q8IY82 874 aa20.11■□□□□ 0.81
CHST3-201ENST00000373115 CHAF1AQ13111 956 aaPredicted RBP20.1■□□□□ 0.81
CHST3-201ENST00000373115 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
CHST3-201ENST00000373115 NPHP1O15259 732 aa20.09■□□□□ 0.81
CHST3-201ENST00000373115 HSCBQ8IWL3 235 aa20.07■□□□□ 0.8
CHST3-201ENST00000373115 GOLGA6L4A6NEF3 574 aa20.07■□□□□ 0.8
CHST3-201ENST00000373115 CLSTN1O94985 981 aa20.06■□□□□ 0.8
CHST3-201ENST00000373115 LMOD2Q6P5Q4 547 aa20.06■□□□□ 0.8
CHST3-201ENST00000373115 NRDCO43847 1150 aa20.05■□□□□ 0.8
CHST3-201ENST00000373115 U2SURPO15042 1029 aaKnown RBP20.03■□□□□ 0.8
CHST3-201ENST00000373115 CLIP1P30622 1438 aa20.03■□□□□ 0.8
CHST3-201ENST00000373115 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
CHST3-201ENST00000373115 CDCA8Q53HL2 280 aa20.02■□□□□ 0.8
CHST3-201ENST00000373115 ZBTB4Q9P1Z0 1013 aaPredicted RBP20■□□□□ 0.79
CHST3-201ENST00000373115 NUDCQ9Y266 331 aa20■□□□□ 0.79
CHST3-201ENST00000373115 L1TD1Q5T7N2 865 aaKnown RBP20■□□□□ 0.79
CHST3-201ENST00000373115 GOLGA2Q08379 1002 aa19.99■□□□□ 0.79
CHST3-201ENST00000373115 SIN3AQ96ST3 1273 aa19.97■□□□□ 0.79
CHST3-201ENST00000373115 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
CHST3-201ENST00000373115 GZF1Q9H116 711 aaPredicted RBP19.95■□□□□ 0.78
CHST3-201ENST00000373115 POGKQ9P215 609 aa19.95■□□□□ 0.78
CHST3-201ENST00000373115 APBB1O00213 710 aa19.91■□□□□ 0.78
CHST3-201ENST00000373115 SOX12O15370 315 aa19.91■□□□□ 0.78
CHST3-201ENST00000373115 ISY1Q9ULR0 285 aaKnown RBP19.91■□□□□ 0.78
CHST3-201ENST00000373115 MCCP23508 829 aa19.9■□□□□ 0.78
CHST3-201ENST00000373115 CHMP4BQ9H444 224 aaKnown RBP19.9■□□□□ 0.78
CHST3-201ENST00000373115 RBM19Q9Y4C8 960 aaKnown RBP19.89■□□□□ 0.77
CHST3-201ENST00000373115 MS4A1P11836 297 aa19.89■□□□□ 0.77
CHST3-201ENST00000373115 GNL2Q13823 731 aaKnown RBP19.88■□□□□ 0.77
CHST3-201ENST00000373115 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
CHST3-201ENST00000373115 PLEKHD1A6NEE1 506 aa19.88■□□□□ 0.77
CHST3-201ENST00000373115 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
CHST3-201ENST00000373115 PNNQ9H307 717 aaKnown RBP19.85■□□□□ 0.77
CHST3-201ENST00000373115 CFDP1Q9UEE9 299 aaPredicted RBP19.84■□□□□ 0.77
CHST3-201ENST00000373115 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.77
CHST3-201ENST00000373115 CEP162Q5TB80 1403 aa19.83■□□□□ 0.77
CHST3-201ENST00000373115 NOC3LQ8WTT2 800 aaKnown RBP19.83■□□□□ 0.76
CHST3-201ENST00000373115 SLKQ9H2G2 1235 aaPredicted RBP19.82■□□□□ 0.76
CHST3-201ENST00000373115 KIAA2012Q0VF49 1180 aa19.79■□□□□ 0.76
CHST3-201ENST00000373115 PDE4CQ08493 712 aa19.78■□□□□ 0.76
CHST3-201ENST00000373115 TNNT3P45378 269 aaPredicted RBP19.77■□□□□ 0.76
CHST3-201ENST00000373115 GOLGA3Q08378 1498 aa19.77■□□□□ 0.75
CHST3-201ENST00000373115 SAFB2Q14151 953 aaKnown RBP eCLIP19.76■□□□□ 0.75
CHST3-201ENST00000373115 GBP4Q96PP9 640 aa19.76■□□□□ 0.75
CHST3-201ENST00000373115 TMF1P82094 1093 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms