RNA–Protein interactions for RNA: ENST00000372915.7

MACF1-204, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 23,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-204	ENST00000372915	LAS1L	Q9Y4W2	734 aa	Known RBP	5.26	□□□□□ -1.57
MACF1-204	ENST00000372915	PTMA	P06454	111 aa	Known RBP	5.25	□□□□□ -1.57
MACF1-204	ENST00000372915	ISY1	Q9ULR0	285 aa	Known RBP	5.25	□□□□□ -1.57
MACF1-204	ENST00000372915	BCL11B	Q9C0K0	894 aa	Predicted RBP	5.24	□□□□□ -1.57
MACF1-204	ENST00000372915	STAG3	Q9UJ98	1225 aa		5.24	□□□□□ -1.57
MACF1-204	ENST00000372915	KDM2A	Q9Y2K7	1162 aa		5.24	□□□□□ -1.57
MACF1-204	ENST00000372915	PATL2	C9JE40	543 aa	Known RBP	5.23	□□□□□ -1.57
MACF1-204	ENST00000372915	LMOD2	Q6P5Q4	547 aa		5.22	□□□□□ -1.57
MACF1-204	ENST00000372915	DDX10	Q13206	875 aa	Known RBP	5.21	□□□□□ -1.57
MACF1-204	ENST00000372915	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	5.21	□□□□□ -1.57	9e-7	■■□□□ 13.3
MACF1-204	ENST00000372915	PPM1G	O15355	546 aa	Predicted RBP	5.21	□□□□□ -1.58
MACF1-204	ENST00000372915	HNRNPU	Q00839	825 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
MACF1-204	ENST00000372915	NPHP1	O15259	732 aa		5.2	□□□□□ -1.58
MACF1-204	ENST00000372915	CREBRF	Q8IUR6	639 aa		5.2	□□□□□ -1.58
MACF1-204	ENST00000372915	NEUROD2	Q15784	382 aa		5.19	□□□□□ -1.58
MACF1-204	ENST00000372915	DHX37	Q8IY37	1157 aa	Known RBP	5.19	□□□□□ -1.58
MACF1-204	ENST00000372915	TNNT2	P45379	298 aa	Predicted RBP	5.18	□□□□□ -1.58
MACF1-204	ENST00000372915	SOX12	O15370	315 aa		5.18	□□□□□ -1.58
MACF1-204	ENST00000372915	TRIM44	Q96DX7	344 aa	Predicted RBP	5.18	□□□□□ -1.58
MACF1-204	ENST00000372915	TAF7L	Q5H9L4	462 aa		5.17	□□□□□ -1.58
MACF1-204	ENST00000372915	UPF2	Q9HAU5	1272 aa	Known RBP	5.16	□□□□□ -1.58
MACF1-204	ENST00000372915	ESF1	Q9H501	851 aa	Known RBP	5.16	□□□□□ -1.58
MACF1-204	ENST00000372915	APBB1	O00213	710 aa		5.15	□□□□□ -1.58
MACF1-204	ENST00000372915	HAP1	P54257	671 aa	Predicted RBP	5.15	□□□□□ -1.58
MACF1-204	ENST00000372915	RGS3	P49796	1198 aa		5.14	□□□□□ -1.59
MACF1-204	ENST00000372915	ACIN1	Q9UKV3	1341 aa	Known RBP	5.14	□□□□□ -1.59
MACF1-204	ENST00000372915	ZRSR1	Q15695	479 aa	Known RBP	5.13	□□□□□ -1.59
MACF1-204	ENST00000372915	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	5.13	□□□□□ -1.59
MACF1-204	ENST00000372915	CHIC2	Q9UKJ5	165 aa		5.13	□□□□□ -1.59
MACF1-204	ENST00000372915	GZF1	Q9H116	711 aa	Predicted RBP	5.13	□□□□□ -1.59
MACF1-204	ENST00000372915	DRC7	Q8IY82	874 aa		5.13	□□□□□ -1.59
MACF1-204	ENST00000372915	FOXD4L5	Q5VV16	416 aa	Predicted RBP	5.12	□□□□□ -1.59
MACF1-204	ENST00000372915	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	5.12	□□□□□ -1.59
MACF1-204	ENST00000372915	FGD1	P98174	961 aa		5.12	□□□□□ -1.59
MACF1-204	ENST00000372915	TMC1	Q8TDI8	760 aa		5.12	□□□□□ -1.59
MACF1-204	ENST00000372915	ZNF330	Q9Y3S2	320 aa	Predicted RBP	5.12	□□□□□ -1.59
MACF1-204	ENST00000372915	NOC3L	Q8WTT2	800 aa	Known RBP	5.12	□□□□□ -1.59
MACF1-204	ENST00000372915	MAPK8IP2	Q13387	824 aa	Predicted RBP	5.12	□□□□□ -1.59
MACF1-204	ENST00000372915	FOXD4L1	Q9NU39	408 aa		5.12	□□□□□ -1.59
MACF1-204	ENST00000372915	KRI1	Q8N9T8	703 aa	Known RBP	5.11	□□□□□ -1.59
MACF1-204	ENST00000372915	PTMS	P20962	102 aa		5.11	□□□□□ -1.59
MACF1-204	ENST00000372915	WDR43	Q15061	677 aa	Known RBP eCLIP	5.11	□□□□□ -1.59	3e-6	■■□□□ 14.2
MACF1-204	ENST00000372915	CCDC9	Q9Y3X0	531 aa	Known RBP	5.1	□□□□□ -1.59
MACF1-204	ENST00000372915	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	5.1	□□□□□ -1.59
MACF1-204	ENST00000372915	FOXD4L3	Q6VB84	417 aa	Predicted RBP	5.1	□□□□□ -1.59
MACF1-204	ENST00000372915	PNN	Q9H307	717 aa	Known RBP	5.1	□□□□□ -1.59
MACF1-204	ENST00000372915	MEX3C	Q5U5Q3	659 aa	Known RBP	5.09	□□□□□ -1.59
MACF1-204	ENST00000372915	TNNT3	P45378	269 aa	Predicted RBP	5.09	□□□□□ -1.59
MACF1-204	ENST00000372915	KCNJ4	P48050	445 aa		5.09	□□□□□ -1.59
MACF1-204	ENST00000372915	RGL3	Q3MIN7	710 aa		5.09	□□□□□ -1.6
MACF1-204	ENST00000372915	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.08	□□□□□ -1.6
MACF1-204	ENST00000372915	FRAT1	Q92837	279 aa	Predicted RBP	5.08	□□□□□ -1.6
MACF1-204	ENST00000372915		A0A0U1RQG5	324 aa	Predicted RBP	5.08	□□□□□ -1.6
MACF1-204	ENST00000372915	SKIDA1	Q1XH10	827 aa		5.08	□□□□□ -1.6
MACF1-204	ENST00000372915	OS9	Q13438	667 aa	Predicted RBP	5.07	□□□□□ -1.6
MACF1-204	ENST00000372915	NOL8	Q76FK4	1167 aa	Known RBP	5.07	□□□□□ -1.6
MACF1-204	ENST00000372915	TIMELESS	Q9UNS1	1208 aa		5.06	□□□□□ -1.6
MACF1-204	ENST00000372915	SAMD1	Q6SPF0	538 aa	Predicted RBP	5.06	□□□□□ -1.6
MACF1-204	ENST00000372915	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.06	□□□□□ -1.6
MACF1-204	ENST00000372915	GOLGA2	Q08379	1002 aa		5.06	□□□□□ -1.6
MACF1-204	ENST00000372915	MIER1	Q8N108	512 aa		5.05	□□□□□ -1.6
MACF1-204	ENST00000372915	ZNF526	Q8TF50	670 aa	Predicted RBP	5.05	□□□□□ -1.6
MACF1-204	ENST00000372915	AK7	Q96M32	723 aa		5.05	□□□□□ -1.6
MACF1-204	ENST00000372915	MYH16	Q9H6N6	1097 aa		5.05	□□□□□ -1.6
MACF1-204	ENST00000372915	CCAR2	Q8N163	923 aa	Known RBP	5.05	□□□□□ -1.6
MACF1-204	ENST00000372915	WDR70	Q9NW82	654 aa		5.05	□□□□□ -1.6
MACF1-204	ENST00000372915	B4GALNT3	Q6L9W6	998 aa		5.05	□□□□□ -1.6
MACF1-204	ENST00000372915	APP	P05067	770 aa		5.05	□□□□□ -1.6
MACF1-204	ENST00000372915	MRS2	Q9HD23	443 aa		5.05	□□□□□ -1.6
MACF1-204	ENST00000372915	KDM4A	O75164	1064 aa		5.04	□□□□□ -1.6
MACF1-204	ENST00000372915	VSIG10	Q8N0Z9	540 aa		5.04	□□□□□ -1.6
MACF1-204	ENST00000372915	FBXW7	Q969H0	707 aa		5.03	□□□□□ -1.6
MACF1-204	ENST00000372915	GOLGA6L4	A6NEF3	574 aa		5.03	□□□□□ -1.6
MACF1-204	ENST00000372915	VPS53	Q5VIR6	699 aa		5.03	□□□□□ -1.6
MACF1-204	ENST00000372915	PLCD4	Q9BRC7	762 aa		5.03	□□□□□ -1.6
MACF1-204	ENST00000372915	SAFB2	Q14151	953 aa	Known RBP eCLIP	5.02	□□□□□ -1.61	6e-7	■■□□□ 14.3
MACF1-204	ENST00000372915	KLHL34	Q8N239	644 aa		5.02	□□□□□ -1.61
MACF1-204	ENST00000372915	HSP90AB1	P08238	724 aa	Known RBP	5.02	□□□□□ -1.61
MACF1-204	ENST00000372915	CNKSR2	Q8WXI2	1034 aa		5.02	□□□□□ -1.61
MACF1-204	ENST00000372915	RAD21	O60216	631 aa		5.02	□□□□□ -1.61
MACF1-204	ENST00000372915	PES1	O00541	588 aa	Known RBP	5.02	□□□□□ -1.61
MACF1-204	ENST00000372915	DEK	P35659	375 aa	Known RBP	5.02	□□□□□ -1.61
MACF1-204	ENST00000372915	GOLGA6L22	H0YM25	854 aa		5.01	□□□□□ -1.61
MACF1-204	ENST00000372915	ZNF428	Q96B54	188 aa		5.01	□□□□□ -1.61
MACF1-204	ENST00000372915	PABPN1	Q86U42	306 aa	Known RBP eCLIP	5.01	□□□□□ -1.61
MACF1-204	ENST00000372915	C11orf95	C9JLR9	678 aa	Predicted RBP	5.01	□□□□□ -1.61
MACF1-204	ENST00000372915	IBSP	P21815	317 aa	Predicted RBP	5.01	□□□□□ -1.61
MACF1-204	ENST00000372915	SLK	Q9H2G2	1235 aa	Predicted RBP	5	□□□□□ -1.61
MACF1-204	ENST00000372915	KCNH8	Q96L42	1107 aa		5	□□□□□ -1.61
MACF1-204	ENST00000372915	GNL2	Q13823	731 aa	Known RBP	5	□□□□□ -1.61
MACF1-204	ENST00000372915	CHMP3	Q9Y3E7	222 aa		5	□□□□□ -1.61
MACF1-204	ENST00000372915	U2SURP	O15042	1029 aa	Known RBP	4.99	□□□□□ -1.61
MACF1-204	ENST00000372915	BECN1	Q14457	450 aa		4.99	□□□□□ -1.61
MACF1-204	ENST00000372915	RBM25	P49756	843 aa	Known RBP	4.99	□□□□□ -1.61
MACF1-204	ENST00000372915	USP35	Q9P2H5	1018 aa		4.99	□□□□□ -1.61
MACF1-204	ENST00000372915	SLC4A3	P48751	1232 aa		4.99	□□□□□ -1.61
MACF1-204	ENST00000372915	MLEC	Q14165	292 aa		4.99	□□□□□ -1.61
MACF1-204	ENST00000372915	HSP90B1	P14625	803 aa	Known RBP	4.98	□□□□□ -1.61
MACF1-204	ENST00000372915	FOSB	P53539	338 aa		4.98	□□□□□ -1.61
MACF1-204	ENST00000372915	L1TD1	Q5T7N2	865 aa	Known RBP	4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms