RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 TAOK2Q9UL54 1235 aa18.94■□□□□ 0.62
UBR2-201ENST00000372899 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
UBR2-201ENST00000372899 TSPY4P0CV99 314 aa18.93■□□□□ 0.62
UBR2-201ENST00000372899 TSPY10P0CW01 314 aa18.93■□□□□ 0.62
UBR2-201ENST00000372899 GOLGA6L22H0YM25 854 aa18.92■□□□□ 0.62
UBR2-201ENST00000372899 TPRNQ4KMQ1 711 aa18.88■□□□□ 0.61
UBR2-201ENST00000372899 BECN1Q14457 450 aa18.88■□□□□ 0.61
UBR2-201ENST00000372899 FKBP8Q14318 412 aa18.88■□□□□ 0.61
UBR2-201ENST00000372899 PRM3Q9NNZ6 103 aa18.87■□□□□ 0.61
UBR2-201ENST00000372899 PTMAP06454 111 aaKnown RBP18.86■□□□□ 0.61
UBR2-201ENST00000372899 NBR1Q14596 966 aa18.86■□□□□ 0.61
UBR2-201ENST00000372899 TNNT2P45379 298 aaPredicted RBP18.85■□□□□ 0.61
UBR2-201ENST00000372899 PPM1GO15355 546 aaPredicted RBP18.85■□□□□ 0.61
UBR2-201ENST00000372899 ISY1Q9ULR0 285 aaKnown RBP18.84■□□□□ 0.61
UBR2-201ENST00000372899 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
UBR2-201ENST00000372899 GOLGA6L6A8MZA4 724 aa18.84■□□□□ 0.61
UBR2-201ENST00000372899 CHIC2Q9UKJ5 165 aa18.82■□□□□ 0.6
UBR2-201ENST00000372899 DNTTIP2Q5QJE6 756 aaKnown RBP18.82■□□□□ 0.6
UBR2-201ENST00000372899 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
UBR2-201ENST00000372899 FGD1P98174 961 aa18.81■□□□□ 0.6
UBR2-201ENST00000372899 CFAP53Q96M91 514 aa18.8■□□□□ 0.6
UBR2-201ENST00000372899 NAP1L2Q9ULW6 460 aaPredicted RBP18.8■□□□□ 0.6
UBR2-201ENST00000372899 OS9Q13438 667 aaPredicted RBP18.79■□□□□ 0.6
UBR2-201ENST00000372899 ANP32EQ9BTT0 268 aa18.78■□□□□ 0.6
UBR2-201ENST00000372899 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.6
UBR2-201ENST00000372899 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
UBR2-201ENST00000372899 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
UBR2-201ENST00000372899 TRHP20396 242 aaPredicted RBP18.76■□□□□ 0.59
UBR2-201ENST00000372899 FTSJ3Q8IY81 847 aaKnown RBP18.76■□□□□ 0.59
UBR2-201ENST00000372899 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
UBR2-201ENST00000372899 DDRGK1Q96HY6 314 aa18.73■□□□□ 0.59
UBR2-201ENST00000372899 KCNJ4P48050 445 aa18.71■□□□□ 0.59
UBR2-201ENST00000372899 DDX10Q13206 875 aaKnown RBP18.7■□□□□ 0.58
UBR2-201ENST00000372899 NRDCO43847 1150 aa18.69■□□□□ 0.58
UBR2-201ENST00000372899 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
UBR2-201ENST00000372899 MAPK8IP3Q9UPT6 1336 aa18.65■□□□□ 0.58
UBR2-201ENST00000372899 KIAA2012Q0VF49 1180 aa18.65■□□□□ 0.58
UBR2-201ENST00000372899 L1TD1Q5T7N2 865 aaKnown RBP18.65■□□□□ 0.58
UBR2-201ENST00000372899 POGKQ9P215 609 aa18.65■□□□□ 0.58
UBR2-201ENST00000372899 PLCB2Q00722 1185 aa18.65■□□□□ 0.58
UBR2-201ENST00000372899 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
UBR2-201ENST00000372899 CDCA8Q53HL2 280 aa18.62■□□□□ 0.57
UBR2-201ENST00000372899 MTUS2Q5JR59 1369 aa18.62■□□□□ 0.57
UBR2-201ENST00000372899 KNSTRNQ9Y448 316 aa18.59■□□□□ 0.57
UBR2-201ENST00000372899 GNL2Q13823 731 aaKnown RBP18.59■□□□□ 0.57
UBR2-201ENST00000372899 NUDCQ9Y266 331 aa18.58■□□□□ 0.56
UBR2-201ENST00000372899 PNNQ9H307 717 aaKnown RBP18.58■□□□□ 0.56
UBR2-201ENST00000372899 CHMP4BQ9H444 224 aaKnown RBP18.57■□□□□ 0.56
UBR2-201ENST00000372899 NOC3LQ8WTT2 800 aaKnown RBP18.56■□□□□ 0.56
UBR2-201ENST00000372899 G3V3G9 751 aa18.56■□□□□ 0.56
UBR2-201ENST00000372899 DCAF8Q5TAQ9 597 aa18.56■□□□□ 0.56
UBR2-201ENST00000372899 GOLGA6L4A6NEF3 574 aa18.55■□□□□ 0.56
UBR2-201ENST00000372899 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
UBR2-201ENST00000372899 RGL3Q3MIN7 710 aa18.55■□□□□ 0.56
UBR2-201ENST00000372899 HDGFP51858 240 aaKnown RBP18.53■□□□□ 0.56
UBR2-201ENST00000372899 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
UBR2-201ENST00000372899 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
UBR2-201ENST00000372899 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
UBR2-201ENST00000372899 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
UBR2-201ENST00000372899 ACIN1Q9UKV3 1341 aaKnown RBP18.48■□□□□ 0.55
UBR2-201ENST00000372899 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
UBR2-201ENST00000372899 DRC7Q8IY82 874 aa18.46■□□□□ 0.55
UBR2-201ENST00000372899 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
UBR2-201ENST00000372899 MCCP23508 829 aa18.45■□□□□ 0.54
UBR2-201ENST00000372899 SOX12O15370 315 aa18.43■□□□□ 0.54
UBR2-201ENST00000372899 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
UBR2-201ENST00000372899 RRP7BPQ9NSQ0 103 aa18.42■□□□□ 0.54
UBR2-201ENST00000372899 MS4A1P11836 297 aa18.42■□□□□ 0.54
UBR2-201ENST00000372899 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
UBR2-201ENST00000372899 RTF1Q92541 710 aaKnown RBP18.41■□□□□ 0.54
UBR2-201ENST00000372899 ZNF330Q9Y3S2 320 aaPredicted RBP18.41■□□□□ 0.54
UBR2-201ENST00000372899 MLECQ14165 292 aa18.4■□□□□ 0.54
UBR2-201ENST00000372899 CSB-PGBD3P0DP91 1061 aa18.39■□□□□ 0.53
UBR2-201ENST00000372899 FRAT1Q92837 279 aaPredicted RBP18.37■□□□□ 0.53
UBR2-201ENST00000372899 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
UBR2-201ENST00000372899 PAK3O75914 559 aaPredicted RBP18.36■□□□□ 0.53
UBR2-201ENST00000372899 A0A0U1RQG5 324 aaPredicted RBP18.36■□□□□ 0.53
UBR2-201ENST00000372899 PDE4CQ08493 712 aa18.36■□□□□ 0.53
UBR2-201ENST00000372899 NAP1L5Q96NT1 182 aaPredicted RBP18.35■□□□□ 0.53
UBR2-201ENST00000372899 KANK1Q14678 1352 aa18.35■□□□□ 0.53
UBR2-201ENST00000372899 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.34■□□□□ 0.53
UBR2-201ENST00000372899 CNKSR2Q8WXI2 1034 aa18.32■□□□□ 0.52
UBR2-201ENST00000372899 KIAA1211Q6ZU35 1233 aa18.32■□□□□ 0.52
UBR2-201ENST00000372899 TAF7LQ5H9L4 462 aa18.32■□□□□ 0.52
UBR2-201ENST00000372899 VPS53Q5VIR6 699 aa18.31■□□□□ 0.52
UBR2-201ENST00000372899 CEP89Q96ST8 783 aa18.31■□□□□ 0.52
UBR2-201ENST00000372899 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
UBR2-201ENST00000372899 HIRIP3Q9BW71 556 aaPredicted RBP18.31■□□□□ 0.52
UBR2-201ENST00000372899 SRPK2P78362 688 aaKnown RBP18.3■□□□□ 0.52
UBR2-201ENST00000372899 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
UBR2-201ENST00000372899 CARD11Q9BXL7 1154 aa18.3■□□□□ 0.52
UBR2-201ENST00000372899 CFAP44Q96MT7 982 aa18.29■□□□□ 0.52
UBR2-201ENST00000372899 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
UBR2-201ENST00000372899 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
UBR2-201ENST00000372899 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.52
UBR2-201ENST00000372899 HSCBQ8IWL3 235 aa18.27■□□□□ 0.52
UBR2-201ENST00000372899 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.51
UBR2-201ENST00000372899 CCDC34Q96HJ3 373 aa18.25■□□□□ 0.51
UBR2-201ENST00000372899 TPM4P67936 248 aa18.24■□□□□ 0.51
UBR2-201ENST00000372899 RASSF8Q8NHQ8 419 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms