RNA–Protein interactions for RNA: ENST00000370137.5

LRRC39-202, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC39, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-202ENST00000370137 CLCN6P51797 869 aa11.75□□□□□ -0.53
LRRC39-202ENST00000370137 NUBP1P53384 320 aa11.73□□□□□ -0.53
LRRC39-202ENST00000370137 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
LRRC39-202ENST00000370137 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
LRRC39-202ENST00000370137 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
LRRC39-202ENST00000370137 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
LRRC39-202ENST00000370137 TIMELESSQ9UNS1 1208 aa11.71□□□□□ -0.53
LRRC39-202ENST00000370137 BCANQ96GW7 911 aa11.69□□□□□ -0.54
LRRC39-202ENST00000370137 CCDC61Q9Y6R9 512 aa11.67□□□□□ -0.54
LRRC39-202ENST00000370137 GALR2O43603 387 aaPredicted RBP11.64□□□□□ -0.55
LRRC39-202ENST00000370137 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
LRRC39-202ENST00000370137 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
LRRC39-202ENST00000370137 POTEIP0CG38 1075 aa11.59□□□□□ -0.55
LRRC39-202ENST00000370137 KIF12Q96FN5 646 aa11.59□□□□□ -0.55
LRRC39-202ENST00000370137 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
LRRC39-202ENST00000370137 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
LRRC39-202ENST00000370137 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
LRRC39-202ENST00000370137 TPRNQ4KMQ1 711 aa11.54□□□□□ -0.56
LRRC39-202ENST00000370137 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
LRRC39-202ENST00000370137 MAP3K13O43283 966 aa11.53□□□□□ -0.56
LRRC39-202ENST00000370137 HOMEZQ8IX15 550 aa11.53□□□□□ -0.56
LRRC39-202ENST00000370137 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
LRRC39-202ENST00000370137 DCBLD2Q96PD2 775 aa11.53□□□□□ -0.56
LRRC39-202ENST00000370137 RANGAP1P46060 587 aaPredicted RBP11.51□□□□□ -0.57
LRRC39-202ENST00000370137 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
LRRC39-202ENST00000370137 GSE1Q14687 1217 aa11.48□□□□□ -0.57
LRRC39-202ENST00000370137 SGIP1Q9BQI5 828 aa11.48□□□□□ -0.57
LRRC39-202ENST00000370137 TTBK1Q5TCY1 1321 aaPredicted RBP11.46□□□□□ -0.58
LRRC39-202ENST00000370137 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
LRRC39-202ENST00000370137 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
LRRC39-202ENST00000370137 PYGBP11216 843 aa11.43□□□□□ -0.58
LRRC39-202ENST00000370137 ASTLQ6HA08 431 aaPredicted RBP11.43□□□□□ -0.58
LRRC39-202ENST00000370137 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
LRRC39-202ENST00000370137 ATMINO43313 823 aaPredicted RBP11.41□□□□□ -0.58
LRRC39-202ENST00000370137 IFNL1Q8IU54 200 aa11.41□□□□□ -0.58
LRRC39-202ENST00000370137 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
LRRC39-202ENST00000370137 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
LRRC39-202ENST00000370137 TIE1P35590 1138 aa11.38□□□□□ -0.59
LRRC39-202ENST00000370137 BMP2KQ9NSY1 1161 aaPredicted RBP11.38□□□□□ -0.59
LRRC39-202ENST00000370137 CIZ1Q9ULV3 898 aaPredicted RBP11.37□□□□□ -0.59
LRRC39-202ENST00000370137 ATN1P54259 1190 aaPredicted RBP11.35□□□□□ -0.59
LRRC39-202ENST00000370137 TTLL13PA6NNM8 815 aa11.32□□□□□ -0.6
LRRC39-202ENST00000370137 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
LRRC39-202ENST00000370137 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
LRRC39-202ENST00000370137 LHX8Q68G74 356 aa11.3□□□□□ -0.6
LRRC39-202ENST00000370137 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
LRRC39-202ENST00000370137 SLC39A7Q92504 469 aa11.29□□□□□ -0.6
LRRC39-202ENST00000370137 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
LRRC39-202ENST00000370137 C7P10643 843 aa11.27□□□□□ -0.61
LRRC39-202ENST00000370137 MYT1Q01538 1121 aa11.27□□□□□ -0.61
LRRC39-202ENST00000370137 TRIM41Q8WV44 630 aa11.27□□□□□ -0.61
LRRC39-202ENST00000370137 TMEM106CQ9BVX2 250 aa11.27□□□□□ -0.61
LRRC39-202ENST00000370137 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
LRRC39-202ENST00000370137 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
LRRC39-202ENST00000370137 POTEB2H3BUK9 544 aa11.21□□□□□ -0.61
LRRC39-202ENST00000370137 POTEFA5A3E0 1075 aa11.19□□□□□ -0.62
LRRC39-202ENST00000370137 IER5LQ5T953 404 aa11.18□□□□□ -0.62
LRRC39-202ENST00000370137 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
LRRC39-202ENST00000370137 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
LRRC39-202ENST00000370137 PSEN1P49768 467 aa11.17□□□□□ -0.62
LRRC39-202ENST00000370137 PDAP1Q13442 181 aaKnown RBP11.16□□□□□ -0.62
LRRC39-202ENST00000370137 COLQQ9Y215 455 aaPredicted RBP11.15□□□□□ -0.63
LRRC39-202ENST00000370137 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
LRRC39-202ENST00000370137 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
LRRC39-202ENST00000370137 PKD2Q13563 968 aa11.12□□□□□ -0.63
LRRC39-202ENST00000370137 RIOK3O14730 519 aaKnown RBP11.1□□□□□ -0.63
LRRC39-202ENST00000370137 SEC24BO95487 1268 aa11.1□□□□□ -0.63
LRRC39-202ENST00000370137 IRX5P78411 483 aaPredicted RBP11.1□□□□□ -0.63
LRRC39-202ENST00000370137 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
LRRC39-202ENST00000370137 ECM2O94769 699 aaPredicted RBP11.07□□□□□ -0.64
LRRC39-202ENST00000370137 TMEM132AQ24JP5 1023 aa11.05□□□□□ -0.64
LRRC39-202ENST00000370137 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
LRRC39-202ENST00000370137 PLCG2P16885 1265 aa11.04□□□□□ -0.64
LRRC39-202ENST00000370137 OCEL1Q9H607 264 aa11.04□□□□□ -0.64
LRRC39-202ENST00000370137 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
LRRC39-202ENST00000370137 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
LRRC39-202ENST00000370137 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
LRRC39-202ENST00000370137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
LRRC39-202ENST00000370137 MAMSTRQ6ZN01 415 aa11.02□□□□□ -0.65
LRRC39-202ENST00000370137 C14orf37Q86TY3 774 aa11.02□□□□□ -0.65
LRRC39-202ENST00000370137 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
LRRC39-202ENST00000370137 RGL2O15211 777 aa11□□□□□ -0.65
LRRC39-202ENST00000370137 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
LRRC39-202ENST00000370137 PDCD7Q8N8D1 485 aaKnown RBP11□□□□□ -0.65
LRRC39-202ENST00000370137 SCUBE2Q9NQ36 999 aa10.97□□□□□ -0.65
LRRC39-202ENST00000370137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.65
LRRC39-202ENST00000370137 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
LRRC39-202ENST00000370137 NPM2Q86SE8 214 aaKnown RBP10.94□□□□□ -0.66
LRRC39-202ENST00000370137 KDM2AQ9Y2K7 1162 aa10.94□□□□□ -0.66
LRRC39-202ENST00000370137 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
LRRC39-202ENST00000370137 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
LRRC39-202ENST00000370137 SOX12O15370 315 aa10.88□□□□□ -0.67
LRRC39-202ENST00000370137 L3MBTL3Q96JM7 780 aaPredicted RBP10.88□□□□□ -0.67
LRRC39-202ENST00000370137 STK24Q9Y6E0 443 aa10.88□□□□□ -0.67
LRRC39-202ENST00000370137 STK25O00506 426 aa10.87□□□□□ -0.67
LRRC39-202ENST00000370137 DCAF8L2P0C7V8 631 aa10.87□□□□□ -0.67
LRRC39-202ENST00000370137 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
LRRC39-202ENST00000370137 MS4A4AQ96JQ5 239 aa10.82□□□□□ -0.68
LRRC39-202ENST00000370137 SLAIN1Q8ND83 568 aa10.81□□□□□ -0.68
LRRC39-202ENST00000370137 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms