RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 GTPBP6O43824 516 aaPredicted RBP7.92□□□□□ -1.14
RNVU1-3-201ENST00000364313 NKX1-1Q15270 411 aaPredicted RBP7.91□□□□□ -1.14
RNVU1-3-201ENST00000364313 TIMELESSQ9UNS1 1208 aa7.91□□□□□ -1.14
RNVU1-3-201ENST00000364313 GTF3C3Q9Y5Q9 886 aa7.91□□□□□ -1.14
RNVU1-3-201ENST00000364313 SGIP1Q9BQI5 828 aa7.9□□□□□ -1.14
RNVU1-3-201ENST00000364313 TMEM132AQ24JP5 1023 aa7.89□□□□□ -1.15
RNVU1-3-201ENST00000364313 RIOK3O14730 519 aaKnown RBP7.87□□□□□ -1.15
RNVU1-3-201ENST00000364313 NUBP1P53384 320 aa7.87□□□□□ -1.15
RNVU1-3-201ENST00000364313 ARXQ96QS3 562 aa7.87□□□□□ -1.15
RNVU1-3-201ENST00000364313 TULP1O00294 542 aaPredicted RBP7.86□□□□□ -1.15
RNVU1-3-201ENST00000364313 CHRM1P11229 460 aaPredicted RBP7.86□□□□□ -1.15
RNVU1-3-201ENST00000364313 RYDENQ9NUL5 291 aaKnown RBP7.86□□□□□ -1.15
RNVU1-3-201ENST00000364313 VGFO15240 615 aaPredicted RBP7.83□□□□□ -1.16
RNVU1-3-201ENST00000364313 P3H3Q8IVL6 736 aa7.79□□□□□ -1.16
RNVU1-3-201ENST00000364313 STK25O00506 426 aa7.77□□□□□ -1.17
RNVU1-3-201ENST00000364313 DCAF8Q5TAQ9 597 aa7.76□□□□□ -1.17
RNVU1-3-201ENST00000364313 FAM212AQ96EL1 285 aa7.74□□□□□ -1.17
RNVU1-3-201ENST00000364313 MNX1P50219 401 aaPredicted RBP7.73□□□□□ -1.17
RNVU1-3-201ENST00000364313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.72□□□□□ -1.17
RNVU1-3-201ENST00000364313 DAXXQ9UER7 740 aaPredicted RBP7.72□□□□□ -1.17
RNVU1-3-201ENST00000364313 BCL11BQ9C0K0 894 aaPredicted RBP7.7□□□□□ -1.18
RNVU1-3-201ENST00000364313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.69□□□□□ -1.18
RNVU1-3-201ENST00000364313 SPDYE1Q8NFV5 336 aaPredicted RBP7.69□□□□□ -1.18
RNVU1-3-201ENST00000364313 ZFP91Q96JP5 570 aaPredicted RBP7.69□□□□□ -1.18
RNVU1-3-201ENST00000364313 CREBZFQ9NS37 354 aa7.68□□□□□ -1.18
RNVU1-3-201ENST00000364313 STK24Q9Y6E0 443 aa7.68□□□□□ -1.18
RNVU1-3-201ENST00000364313 LMOD2Q6P5Q4 547 aa7.66□□□□□ -1.18
RNVU1-3-201ENST00000364313 RASEFQ8IZ41 740 aa7.64□□□□□ -1.19
RNVU1-3-201ENST00000364313 KCNV2Q8TDN2 545 aa7.64□□□□□ -1.19
RNVU1-3-201ENST00000364313 HOMEZQ8IX15 550 aa7.63□□□□□ -1.19
RNVU1-3-201ENST00000364313 C14orf37Q86TY3 774 aa7.62□□□□□ -1.19
RNVU1-3-201ENST00000364313 AKT1S1Q96B36 256 aa7.62□□□□□ -1.19
RNVU1-3-201ENST00000364313 WDR70Q9NW82 654 aa7.62□□□□□ -1.19
RNVU1-3-201ENST00000364313 BRPF1P55201 1214 aaPredicted RBP7.61□□□□□ -1.19
RNVU1-3-201ENST00000364313 ARHGEF1Q92888 912 aaKnown RBP7.61□□□□□ -1.19
RNVU1-3-201ENST00000364313 PRR29P0C7W0 189 aa7.6□□□□□ -1.19
RNVU1-3-201ENST00000364313 CADPS2Q86UW7 1296 aa7.59□□□□□ -1.19
RNVU1-3-201ENST00000364313 ZNF467Q7Z7K2 595 aaPredicted RBP7.58□□□□□ -1.2
RNVU1-3-201ENST00000364313 RBM42Q9BTD8 480 aaKnown RBP7.57□□□□□ -1.2
RNVU1-3-201ENST00000364313 PYGBP11216 843 aa7.56□□□□□ -1.2
RNVU1-3-201ENST00000364313 ZC3H15Q8WU90 426 aaKnown RBP7.55□□□□□ -1.2
RNVU1-3-201ENST00000364313 TESPA1A2RU30 521 aaPredicted RBP7.53□□□□□ -1.2
RNVU1-3-201ENST00000364313 PDAP1Q13442 181 aaKnown RBP7.53□□□□□ -1.2
RNVU1-3-201ENST00000364313 MFRPQ9BY79 579 aa7.51□□□□□ -1.21
RNVU1-3-201ENST00000364313 E2F4Q16254 413 aa7.5□□□□□ -1.21
RNVU1-3-201ENST00000364313 ARIH1Q9Y4X5 557 aaPredicted RBP7.5□□□□□ -1.21
RNVU1-3-201ENST00000364313 ZMYND10O75800 440 aa7.49□□□□□ -1.21
RNVU1-3-201ENST00000364313 REM2Q8IYK8 340 aaPredicted RBP7.49□□□□□ -1.21
RNVU1-3-201ENST00000364313 CLEC11AQ9Y240 323 aa7.49□□□□□ -1.21
RNVU1-3-201ENST00000364313 NEUROD2Q15784 382 aa7.46□□□□□ -1.22
RNVU1-3-201ENST00000364313 ZNF579Q8NAF0 562 aaKnown RBP7.46□□□□□ -1.22
RNVU1-3-201ENST00000364313 SMYD5Q6GMV2 418 aa7.45□□□□□ -1.22
RNVU1-3-201ENST00000364313 FBXO22Q8NEZ5 403 aa7.45□□□□□ -1.22
RNVU1-3-201ENST00000364313 SLC24A3Q9HC58 644 aa7.45□□□□□ -1.22
RNVU1-3-201ENST00000364313 SOX12O15370 315 aa7.44□□□□□ -1.22
RNVU1-3-201ENST00000364313 SEMA3EO15041 775 aa7.43□□□□□ -1.22
RNVU1-3-201ENST00000364313 PSEN1P49768 467 aa7.43□□□□□ -1.22
RNVU1-3-201ENST00000364313 BARGINQ6ZT62 677 aa7.43□□□□□ -1.22
RNVU1-3-201ENST00000364313 NLRP6P59044 892 aa7.42□□□□□ -1.22
RNVU1-3-201ENST00000364313 MFSD10Q14728 455 aa7.42□□□□□ -1.22
RNVU1-3-201ENST00000364313 POTEDQ86YR6 584 aa7.42□□□□□ -1.22
RNVU1-3-201ENST00000364313 PPP1R37O75864 691 aa7.41□□□□□ -1.22
RNVU1-3-201ENST00000364313 CCDC61Q9Y6R9 512 aa7.4□□□□□ -1.22
RNVU1-3-201ENST00000364313 CAMK2BQ13554 666 aa7.39□□□□□ -1.23
RNVU1-3-201ENST00000364313 PCDHB8Q9UN66 801 aa7.39□□□□□ -1.23
RNVU1-3-201ENST00000364313 PCDHB13Q9Y5F0 798 aa7.39□□□□□ -1.23
RNVU1-3-201ENST00000364313 NCKAP5LQ9HCH0 1330 aa7.38□□□□□ -1.23
RNVU1-3-201ENST00000364313 PITPNM1O00562 1244 aa7.38□□□□□ -1.23
RNVU1-3-201ENST00000364313 PDE4AP27815 886 aa7.38□□□□□ -1.23
RNVU1-3-201ENST00000364313 CACNB1Q02641 598 aaPredicted RBP7.36□□□□□ -1.23
RNVU1-3-201ENST00000364313 AK7Q96M32 723 aa7.36□□□□□ -1.23
RNVU1-3-201ENST00000364313 CRISPLD2Q9H0B8 497 aa7.36□□□□□ -1.23
RNVU1-3-201ENST00000364313 TSPYL2Q9H2G4 693 aaPredicted RBP7.36□□□□□ -1.23
RNVU1-3-201ENST00000364313 EFCAB3Q8N7B9 438 aa7.35□□□□□ -1.23
RNVU1-3-201ENST00000364313 FARP1Q9Y4F1 1045 aaPredicted RBP7.35□□□□□ -1.23
RNVU1-3-201ENST00000364313 SUPT5HO00267 1087 aaKnown RBP7.34□□□□□ -1.23
RNVU1-3-201ENST00000364313 ZMYND15Q9H091 742 aa7.33□□□□□ -1.24
RNVU1-3-201ENST00000364313 PHF8Q9UPP1 1060 aa7.33□□□□□ -1.24
RNVU1-3-201ENST00000364313 LARP6Q9BRS8 491 aaKnown RBP7.32□□□□□ -1.24
RNVU1-3-201ENST00000364313 IFNL1Q8IU54 200 aa7.31□□□□□ -1.24
RNVU1-3-201ENST00000364313 DDX27Q96GQ7 796 aaKnown RBP7.3□□□□□ -1.24
RNVU1-3-201ENST00000364313 RSPH6AQ9H0K4 717 aa7.29□□□□□ -1.24
RNVU1-3-201ENST00000364313 CABP2Q9NPB3 220 aa7.29□□□□□ -1.24
RNVU1-3-201ENST00000364313 KIF12Q96FN5 646 aa7.28□□□□□ -1.24
RNVU1-3-201ENST00000364313 MS4A4AQ96JQ5 239 aa7.27□□□□□ -1.25
RNVU1-3-201ENST00000364313 TRIM66O15016 1216 aa7.26□□□□□ -1.25
RNVU1-3-201ENST00000364313 CHADLQ6NUI6 762 aa7.26□□□□□ -1.25
RNVU1-3-201ENST00000364313 GPIHBP1Q8IV16 184 aa7.26□□□□□ -1.25
RNVU1-3-201ENST00000364313 KDM4CQ9H3R0 1056 aa7.26□□□□□ -1.25
RNVU1-3-201ENST00000364313 MAP3K13O43283 966 aa7.25□□□□□ -1.25
RNVU1-3-201ENST00000364313 SPDYE16A6NNV3 312 aaPredicted RBP7.24□□□□□ -1.25
RNVU1-3-201ENST00000364313 PDE4DQ08499 809 aa7.24□□□□□ -1.25
RNVU1-3-201ENST00000364313 GPBP1L1Q9HC44 474 aaPredicted RBP7.24□□□□□ -1.25
RNVU1-3-201ENST00000364313 PAK3O75914 559 aaPredicted RBP7.23□□□□□ -1.25
RNVU1-3-201ENST00000364313 RBM26Q5T8P6 1007 aaKnown RBP7.23□□□□□ -1.25
RNVU1-3-201ENST00000364313 KRI1Q8N9T8 703 aaKnown RBP7.22□□□□□ -1.25
RNVU1-3-201ENST00000364313 IL27Q8NEV9 243 aa7.22□□□□□ -1.25
RNVU1-3-201ENST00000364313 UBTFP17480 764 aaKnown RBP7.21□□□□□ -1.26
RNVU1-3-201ENST00000364313 MLLT3P42568 568 aaPredicted RBP7.21□□□□□ -1.26
RNVU1-3-201ENST00000364313 PDIA6Q15084 440 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms