RNA–Protein interactions for RNA: ENST00000360108.7

CACNA1E-203, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 6,970 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-203ENST00000360108 SOX12O15370 315 aa14.38□□□□□ -0.11
CACNA1E-203ENST00000360108 AEBP2Q6ZN18 517 aaPredicted RBP14.37□□□□□ -0.11
CACNA1E-203ENST00000360108 HIRIP3Q9BW71 556 aaPredicted RBP14.37□□□□□ -0.11
CACNA1E-203ENST00000360108 DDX10Q13206 875 aaKnown RBP14.35□□□□□ -0.11
CACNA1E-203ENST00000360108 LAS1LQ9Y4W2 734 aaKnown RBP14.32□□□□□ -0.12
CACNA1E-203ENST00000360108 POGKQ9P215 609 aa14.32□□□□□ -0.12
CACNA1E-203ENST00000360108 HNRNPUQ00839 825 aaKnown RBP eCLIP14.32□□□□□ -0.12
CACNA1E-203ENST00000360108 CDK11BP21127 795 aaKnown RBP14.31□□□□□ -0.12
CACNA1E-203ENST00000360108 CCDC9Q9Y3X0 531 aaKnown RBP14.3□□□□□ -0.12
CACNA1E-203ENST00000360108 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
CACNA1E-203ENST00000360108 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
CACNA1E-203ENST00000360108 UPF2Q9HAU5 1272 aaKnown RBP14.28□□□□□ -0.12
CACNA1E-203ENST00000360108 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
CACNA1E-203ENST00000360108 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.13
CACNA1E-203ENST00000360108 TPRNQ4KMQ1 711 aa14.26□□□□□ -0.13
CACNA1E-203ENST00000360108 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
CACNA1E-203ENST00000360108 CFDP1Q9UEE9 299 aaPredicted RBP14.24□□□□□ -0.13
CACNA1E-203ENST00000360108 SAFB2Q14151 953 aaKnown RBP eCLIP14.24□□□□□ -0.13
CACNA1E-203ENST00000360108 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.23□□□□□ -0.13
CACNA1E-203ENST00000360108 NEUROD2Q15784 382 aa14.22□□□□□ -0.13
CACNA1E-203ENST00000360108 ANP32BQ92688 251 aaKnown RBP14.21□□□□□ -0.13
CACNA1E-203ENST00000360108 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
CACNA1E-203ENST00000360108 FKBP8Q14318 412 aa14.18□□□□□ -0.14
CACNA1E-203ENST00000360108 GOLGA2Q08379 1002 aa14.18□□□□□ -0.14
CACNA1E-203ENST00000360108 MRS2Q9HD23 443 aa14.18□□□□□ -0.14
CACNA1E-203ENST00000360108 GGT6Q6P531 493 aa14.18□□□□□ -0.14
CACNA1E-203ENST00000360108 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
CACNA1E-203ENST00000360108 ZNF330Q9Y3S2 320 aaPredicted RBP14.16□□□□□ -0.14
CACNA1E-203ENST00000360108 IRX6P78412 446 aaPredicted RBP14.15□□□□□ -0.14
CACNA1E-203ENST00000360108 STK26Q9P289 416 aa14.15□□□□□ -0.14
CACNA1E-203ENST00000360108 RB1CC1Q8TDY2 1594 aa14.15□□□□□ -0.14
CACNA1E-203ENST00000360108 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.14□□□□□ -0.15
CACNA1E-203ENST00000360108 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
CACNA1E-203ENST00000360108 CFAP53Q96M91 514 aa14.13□□□□□ -0.15
CACNA1E-203ENST00000360108 CSB-PGBD3P0DP91 1061 aa14.12□□□□□ -0.15
CACNA1E-203ENST00000360108 U2SURPO15042 1029 aaKnown RBP14.11□□□□□ -0.15
CACNA1E-203ENST00000360108 CCDC136Q96JN2 1154 aa14.1□□□□□ -0.15
CACNA1E-203ENST00000360108 KNSTRNQ9Y448 316 aa14.1□□□□□ -0.15
CACNA1E-203ENST00000360108 CLSTN1O94985 981 aa14.1□□□□□ -0.15
CACNA1E-203ENST00000360108 OS9Q13438 667 aaPredicted RBP14.1□□□□□ -0.15
CACNA1E-203ENST00000360108 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
CACNA1E-203ENST00000360108 SRPK2P78362 688 aaKnown RBP14.09□□□□□ -0.15
CACNA1E-203ENST00000360108 PHF23Q9BUL5 403 aaPredicted RBP14.08□□□□□ -0.16
CACNA1E-203ENST00000360108 NAP1L2Q9ULW6 460 aaPredicted RBP14.08□□□□□ -0.16
CACNA1E-203ENST00000360108 MAPK8IP3Q9UPT6 1336 aa14.08□□□□□ -0.16
CACNA1E-203ENST00000360108 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
CACNA1E-203ENST00000360108 HDGFP51858 240 aaKnown RBP14.07□□□□□ -0.16
CACNA1E-203ENST00000360108 CARD11Q9BXL7 1154 aa14.06□□□□□ -0.16
CACNA1E-203ENST00000360108 EIF4G2P78344 907 aaKnown RBP eCLIP14.05□□□□□ -0.16
CACNA1E-203ENST00000360108 CC2D1BQ5T0F9 858 aaKnown RBP14.04□□□□□ -0.16
CACNA1E-203ENST00000360108 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
CACNA1E-203ENST00000360108 FTSJ3Q8IY81 847 aaKnown RBP14.03□□□□□ -0.16
CACNA1E-203ENST00000360108 NUTM2DQ5VT03 806 aaPredicted RBP14.02□□□□□ -0.17
CACNA1E-203ENST00000360108 AMER1Q5JTC6 1135 aaPredicted RBP14□□□□□ -0.17
CACNA1E-203ENST00000360108 CLIP1P30622 1438 aa14□□□□□ -0.17
CACNA1E-203ENST00000360108 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
CACNA1E-203ENST00000360108 TMX4Q9H1E5 349 aaPredicted RBP13.99□□□□□ -0.17
CACNA1E-203ENST00000360108 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
CACNA1E-203ENST00000360108 KANK1Q14678 1352 aa13.99□□□□□ -0.17
CACNA1E-203ENST00000360108 MSH5O43196 834 aa13.99□□□□□ -0.17
CACNA1E-203ENST00000360108 MEX3CQ5U5Q3 659 aaKnown RBP13.99□□□□□ -0.17
CACNA1E-203ENST00000360108 CYB5RLQ6IPT4 315 aa13.98□□□□□ -0.17
CACNA1E-203ENST00000360108 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
CACNA1E-203ENST00000360108 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
CACNA1E-203ENST00000360108 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
CACNA1E-203ENST00000360108 FGD1P98174 961 aa13.97□□□□□ -0.17
CACNA1E-203ENST00000360108 NBR1Q14596 966 aa13.97□□□□□ -0.17
CACNA1E-203ENST00000360108 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.17
CACNA1E-203ENST00000360108 G3V3G9 751 aa13.96□□□□□ -0.17
CACNA1E-203ENST00000360108 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
CACNA1E-203ENST00000360108 ZRSR1Q15695 479 aaKnown RBP13.95□□□□□ -0.18
CACNA1E-203ENST00000360108 DCAF11Q8TEB1 546 aa13.94□□□□□ -0.18
CACNA1E-203ENST00000360108 KCNJ4P48050 445 aa13.94□□□□□ -0.18
CACNA1E-203ENST00000360108 CCNB3Q8WWL7 1395 aa13.93□□□□□ -0.18
CACNA1E-203ENST00000360108 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
CACNA1E-203ENST00000360108 RTF1Q92541 710 aaKnown RBP13.92□□□□□ -0.18
CACNA1E-203ENST00000360108 EIF5BO60841 1220 aaKnown RBP13.91□□□□□ -0.18
CACNA1E-203ENST00000360108 LTV1Q96GA3 475 aaPredicted RBP13.89□□□□□ -0.19
CACNA1E-203ENST00000360108 EID1Q9Y6B2 187 aa13.89□□□□□ -0.19
CACNA1E-203ENST00000360108 KIF27Q86VH2 1401 aa13.89□□□□□ -0.19
CACNA1E-203ENST00000360108 CHMP3Q9Y3E7 222 aa13.87□□□□□ -0.19
CACNA1E-203ENST00000360108 APBB1O00213 710 aa13.87□□□□□ -0.19
CACNA1E-203ENST00000360108 MORC1Q86VD1 984 aa13.84□□□□□ -0.19
CACNA1E-203ENST00000360108 EVA1CP58658 441 aa13.84□□□□□ -0.19
CACNA1E-203ENST00000360108 WRNQ14191 1432 aaPredicted RBP eCLIP13.84□□□□□ -0.19
CACNA1E-203ENST00000360108 NGDNQ8NEJ9 315 aaKnown RBP13.84□□□□□ -0.19
CACNA1E-203ENST00000360108 SIN3AQ96ST3 1273 aa13.84□□□□□ -0.19
CACNA1E-203ENST00000360108 HDGFL2Q7Z4V5 671 aaPredicted RBP13.83□□□□□ -0.2
CACNA1E-203ENST00000360108 GTF2E1P29083 439 aaPredicted RBP13.82□□□□□ -0.2
CACNA1E-203ENST00000360108 FOXD1Q16676 465 aa13.82□□□□□ -0.2
CACNA1E-203ENST00000360108 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
CACNA1E-203ENST00000360108 KIF3BO15066 747 aa13.81□□□□□ -0.2
CACNA1E-203ENST00000360108 PLCB2Q00722 1185 aa13.81□□□□□ -0.2
CACNA1E-203ENST00000360108 TMF1P82094 1093 aa13.8□□□□□ -0.2
CACNA1E-203ENST00000360108 PNNQ9H307 717 aaKnown RBP13.8□□□□□ -0.2
CACNA1E-203ENST00000360108 TAF7LQ5H9L4 462 aa13.79□□□□□ -0.2
CACNA1E-203ENST00000360108 CUX2O14529 1486 aa13.79□□□□□ -0.2
CACNA1E-203ENST00000360108 RGS3P49796 1198 aa13.79□□□□□ -0.2
CACNA1E-203ENST00000360108 ACIN1Q9UKV3 1341 aaKnown RBP13.79□□□□□ -0.2
CACNA1E-203ENST00000360108 GOLGA3Q08378 1498 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 351.6 ms