RNA–Protein interactions for RNA: ENST00000341400.11

NPIPB4-202, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-202ENST00000341400 RNF25Q96BH1 459 aaPredicted RBP14.22□□□□□ -0.13
NPIPB4-202ENST00000341400 DCAF8Q5TAQ9 597 aa14.21□□□□□ -0.13
NPIPB4-202ENST00000341400 DNAJC5Q9H3Z4 198 aa14.21□□□□□ -0.13
NPIPB4-202ENST00000341400 RIOK3O14730 519 aaKnown RBP14.16□□□□□ -0.14
NPIPB4-202ENST00000341400 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
NPIPB4-202ENST00000341400 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
NPIPB4-202ENST00000341400 FAM212AQ96EL1 285 aa14.14□□□□□ -0.15
NPIPB4-202ENST00000341400 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
NPIPB4-202ENST00000341400 PRR29P0C7W0 189 aa14.11□□□□□ -0.15
NPIPB4-202ENST00000341400 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
NPIPB4-202ENST00000341400 NBR1Q14596 966 aa14.07□□□□□ -0.16
NPIPB4-202ENST00000341400 NKX1-1Q15270 411 aaPredicted RBP14.07□□□□□ -0.16
NPIPB4-202ENST00000341400 VGFO15240 615 aaPredicted RBP14.06□□□□□ -0.16
NPIPB4-202ENST00000341400 MNX1P50219 401 aaPredicted RBP14.05□□□□□ -0.16
NPIPB4-202ENST00000341400 STK25O00506 426 aa14.04□□□□□ -0.16
NPIPB4-202ENST00000341400 CHRM1P11229 460 aaPredicted RBP14.03□□□□□ -0.16
NPIPB4-202ENST00000341400 GTPBP6O43824 516 aaPredicted RBP14.02□□□□□ -0.17
NPIPB4-202ENST00000341400 REM2Q8IYK8 340 aaPredicted RBP14.01□□□□□ -0.17
NPIPB4-202ENST00000341400 RASEFQ8IZ41 740 aa13.99□□□□□ -0.17
NPIPB4-202ENST00000341400 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
NPIPB4-202ENST00000341400 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
NPIPB4-202ENST00000341400 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.92□□□□□ -0.18
NPIPB4-202ENST00000341400 ZFP91Q96JP5 570 aaPredicted RBP13.92□□□□□ -0.18
NPIPB4-202ENST00000341400 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
NPIPB4-202ENST00000341400 RYDENQ9NUL5 291 aaKnown RBP13.92□□□□□ -0.18
NPIPB4-202ENST00000341400 PYGBP11216 843 aa13.89□□□□□ -0.19
NPIPB4-202ENST00000341400 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
NPIPB4-202ENST00000341400 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
NPIPB4-202ENST00000341400 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
NPIPB4-202ENST00000341400 P3H3Q8IVL6 736 aa13.7□□□□□ -0.22
NPIPB4-202ENST00000341400 PDAP1Q13442 181 aaKnown RBP13.67□□□□□ -0.22
NPIPB4-202ENST00000341400 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
NPIPB4-202ENST00000341400 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
NPIPB4-202ENST00000341400 WDR70Q9NW82 654 aa13.63□□□□□ -0.23
NPIPB4-202ENST00000341400 PCDHB8Q9UN66 801 aa13.6□□□□□ -0.23
NPIPB4-202ENST00000341400 PCDHB13Q9Y5F0 798 aa13.6□□□□□ -0.23
NPIPB4-202ENST00000341400 CADPS2Q86UW7 1296 aa13.58□□□□□ -0.24
NPIPB4-202ENST00000341400 PSEN1P49768 467 aa13.56□□□□□ -0.24
NPIPB4-202ENST00000341400 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
NPIPB4-202ENST00000341400 CCDC61Q9Y6R9 512 aa13.55□□□□□ -0.24
NPIPB4-202ENST00000341400 KCNV2Q8TDN2 545 aa13.54□□□□□ -0.24
NPIPB4-202ENST00000341400 MFRPQ9BY79 579 aa13.52□□□□□ -0.25
NPIPB4-202ENST00000341400 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
NPIPB4-202ENST00000341400 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
NPIPB4-202ENST00000341400 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
NPIPB4-202ENST00000341400 NLRP6P59044 892 aa13.42□□□□□ -0.26
NPIPB4-202ENST00000341400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.42□□□□□ -0.26
NPIPB4-202ENST00000341400 IFNL1Q8IU54 200 aa13.42□□□□□ -0.26
NPIPB4-202ENST00000341400 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
NPIPB4-202ENST00000341400 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
NPIPB4-202ENST00000341400 SOX12O15370 315 aa13.4□□□□□ -0.26
NPIPB4-202ENST00000341400 PPP1R37O75864 691 aa13.4□□□□□ -0.26
NPIPB4-202ENST00000341400 EFCAB3Q8N7B9 438 aa13.4□□□□□ -0.26
NPIPB4-202ENST00000341400 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
NPIPB4-202ENST00000341400 FBXO22Q8NEZ5 403 aa13.38□□□□□ -0.27
NPIPB4-202ENST00000341400 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
NPIPB4-202ENST00000341400 GTF3C3Q9Y5Q9 886 aa13.38□□□□□ -0.27
NPIPB4-202ENST00000341400 MAP3K13O43283 966 aa13.37□□□□□ -0.27
NPIPB4-202ENST00000341400 KIF12Q96FN5 646 aa13.37□□□□□ -0.27
NPIPB4-202ENST00000341400 TMEM132AQ24JP5 1023 aa13.36□□□□□ -0.27
NPIPB4-202ENST00000341400 E2F4Q16254 413 aa13.35□□□□□ -0.27
NPIPB4-202ENST00000341400 PHF8Q9UPP1 1060 aa13.35□□□□□ -0.27
NPIPB4-202ENST00000341400 TIMELESSQ9UNS1 1208 aa13.31□□□□□ -0.28
NPIPB4-202ENST00000341400 ERICH6Q7L0X2 663 aa13.26□□□□□ -0.29
NPIPB4-202ENST00000341400 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
NPIPB4-202ENST00000341400 PDE4AP27815 886 aa13.23□□□□□ -0.29
NPIPB4-202ENST00000341400 PIP4P2Q8N4L2 257 aa13.23□□□□□ -0.29
NPIPB4-202ENST00000341400 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
NPIPB4-202ENST00000341400 SEMA3EO15041 775 aa13.22□□□□□ -0.29
NPIPB4-202ENST00000341400 ZC3H15Q8WU90 426 aaKnown RBP13.22□□□□□ -0.29
NPIPB4-202ENST00000341400 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
NPIPB4-202ENST00000341400 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
NPIPB4-202ENST00000341400 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
NPIPB4-202ENST00000341400 GOLGA2Q08379 1002 aa13.19□□□□□ -0.3
NPIPB4-202ENST00000341400 MFSD10Q14728 455 aa13.18□□□□□ -0.3
NPIPB4-202ENST00000341400 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
NPIPB4-202ENST00000341400 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
NPIPB4-202ENST00000341400 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
NPIPB4-202ENST00000341400 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
NPIPB4-202ENST00000341400 BRPF1P55201 1214 aaPredicted RBP13.15□□□□□ -0.3
NPIPB4-202ENST00000341400 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
NPIPB4-202ENST00000341400 CRISPLD2Q9H0B8 497 aa13.15□□□□□ -0.3
NPIPB4-202ENST00000341400 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
NPIPB4-202ENST00000341400 ARIH1Q9Y4X5 557 aaPredicted RBP13.12□□□□□ -0.31
NPIPB4-202ENST00000341400 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
NPIPB4-202ENST00000341400 SLC24A3Q9HC58 644 aa13.1□□□□□ -0.31
NPIPB4-202ENST00000341400 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
NPIPB4-202ENST00000341400 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
NPIPB4-202ENST00000341400 ZMYND10O75800 440 aa13.05□□□□□ -0.32
NPIPB4-202ENST00000341400 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
NPIPB4-202ENST00000341400 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
NPIPB4-202ENST00000341400 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
NPIPB4-202ENST00000341400 TIE1P35590 1138 aa12.97□□□□□ -0.33
NPIPB4-202ENST00000341400 PPP1R15BQ5SWA1 713 aa12.97□□□□□ -0.33
NPIPB4-202ENST00000341400 BARGINQ6ZT62 677 aa12.97□□□□□ -0.33
NPIPB4-202ENST00000341400 GPHNQ9NQX3 736 aaPredicted RBP12.96□□□□□ -0.33
NPIPB4-202ENST00000341400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.332e-15■□□□□ 9.2
NPIPB4-202ENST00000341400 ILDR1Q86SU0 546 aaPredicted RBP12.95□□□□□ -0.34
NPIPB4-202ENST00000341400 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
NPIPB4-202ENST00000341400 GPIHBP1Q8IV16 184 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms