RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
SHANK2-201ENST00000338508 NPHP1O15259 732 aa15.68■□□□□ 0.1
SHANK2-201ENST00000338508 HIRIP3Q9BW71 556 aaPredicted RBP15.64■□□□□ 0.09
SHANK2-201ENST00000338508 PPM1GO15355 546 aaPredicted RBP15.63■□□□□ 0.09
SHANK2-201ENST00000338508 ZRSR1Q15695 479 aaKnown RBP15.63■□□□□ 0.09
SHANK2-201ENST00000338508 TRIM44Q96DX7 344 aaPredicted RBP15.62■□□□□ 0.09
SHANK2-201ENST00000338508 DNTTIP2Q5QJE6 756 aaKnown RBP15.6■□□□□ 0.09
SHANK2-201ENST00000338508 PPP1R15AO75807 674 aaPredicted RBP15.6■□□□□ 0.09
SHANK2-201ENST00000338508 PTMAP06454 111 aaKnown RBP15.6■□□□□ 0.09
SHANK2-201ENST00000338508 CLSTN1O94985 981 aa15.59■□□□□ 0.09
SHANK2-201ENST00000338508 LMOD2Q6P5Q4 547 aa15.59■□□□□ 0.09
SHANK2-201ENST00000338508 LAS1LQ9Y4W2 734 aaKnown RBP15.57■□□□□ 0.08
SHANK2-201ENST00000338508 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
SHANK2-201ENST00000338508 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
SHANK2-201ENST00000338508 ARID4BQ4LE39 1312 aaPredicted RBP15.55■□□□□ 0.08
SHANK2-201ENST00000338508 NAP1L2Q9ULW6 460 aaPredicted RBP15.54■□□□□ 0.08
SHANK2-201ENST00000338508 AMER1Q5JTC6 1135 aaPredicted RBP15.52■□□□□ 0.08
SHANK2-201ENST00000338508 BECN1Q14457 450 aa15.48■□□□□ 0.07
SHANK2-201ENST00000338508 KCNH8Q96L42 1107 aa15.47■□□□□ 0.07
SHANK2-201ENST00000338508 GOLGA6L22H0YM25 854 aa15.47■□□□□ 0.07
SHANK2-201ENST00000338508 NEUROD2Q15784 382 aa15.46■□□□□ 0.07
SHANK2-201ENST00000338508 ISY1Q9ULR0 285 aaKnown RBP15.46■□□□□ 0.07
SHANK2-201ENST00000338508 TNNT2P45379 298 aaPredicted RBP15.46■□□□□ 0.06
SHANK2-201ENST00000338508 RGL3Q3MIN7 710 aa15.45■□□□□ 0.06
SHANK2-201ENST00000338508 RTN4Q9NQC3 1192 aaKnown RBP15.44■□□□□ 0.06
SHANK2-201ENST00000338508 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
SHANK2-201ENST00000338508 CASC1Q6TDU7 716 aa15.43■□□□□ 0.06
SHANK2-201ENST00000338508 TSPY4P0CV99 314 aa15.42■□□□□ 0.06
SHANK2-201ENST00000338508 TSPY10P0CW01 314 aa15.42■□□□□ 0.06
SHANK2-201ENST00000338508 FGD1P98174 961 aa15.42■□□□□ 0.06
SHANK2-201ENST00000338508 FTSJ3Q8IY81 847 aaKnown RBP15.42■□□□□ 0.06
SHANK2-201ENST00000338508 OS9Q13438 667 aaPredicted RBP15.41■□□□□ 0.06
SHANK2-201ENST00000338508 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
SHANK2-201ENST00000338508 PRM3Q9NNZ6 103 aa15.39■□□□□ 0.05
SHANK2-201ENST00000338508 NAP1L5Q96NT1 182 aaPredicted RBP15.39■□□□□ 0.05
SHANK2-201ENST00000338508 SOX12O15370 315 aa15.37■□□□□ 0.05
SHANK2-201ENST00000338508 KCNJ4P48050 445 aa15.36■□□□□ 0.05
SHANK2-201ENST00000338508 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
SHANK2-201ENST00000338508 RRP7BPQ9NSQ0 103 aa15.36■□□□□ 0.05
SHANK2-201ENST00000338508 FRAT1Q92837 279 aaPredicted RBP15.32■□□□□ 0.04
SHANK2-201ENST00000338508 PDE4CQ08493 712 aa15.32■□□□□ 0.04
SHANK2-201ENST00000338508 ERICH6BQ5W0A0 696 aa15.31■□□□□ 0.04
SHANK2-201ENST00000338508 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
SHANK2-201ENST00000338508 ANO8Q9HCE9 1232 aaPredicted RBP15.31■□□□□ 0.04
SHANK2-201ENST00000338508 RGS3P49796 1198 aa15.31■□□□□ 0.04
SHANK2-201ENST00000338508 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
SHANK2-201ENST00000338508 CFAP53Q96M91 514 aa15.3■□□□□ 0.04
SHANK2-201ENST00000338508 HSP90AB1P08238 724 aaKnown RBP15.29■□□□□ 0.04
SHANK2-201ENST00000338508 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
SHANK2-201ENST00000338508 GOLGA6L6A8MZA4 724 aa15.27■□□□□ 0.04
SHANK2-201ENST00000338508 MAPK8IP3Q9UPT6 1336 aa15.26■□□□□ 0.03
SHANK2-201ENST00000338508 KNSTRNQ9Y448 316 aa15.25■□□□□ 0.03
SHANK2-201ENST00000338508 U2SURPO15042 1029 aaKnown RBP15.25■□□□□ 0.03
SHANK2-201ENST00000338508 ANP32EQ9BTT0 268 aa15.25■□□□□ 0.03
SHANK2-201ENST00000338508 POGKQ9P215 609 aa15.25■□□□□ 0.03
SHANK2-201ENST00000338508 DRC7Q8IY82 874 aa15.24■□□□□ 0.03
SHANK2-201ENST00000338508 MIER1Q8N108 512 aa15.24■□□□□ 0.03
SHANK2-201ENST00000338508 EIF4G2P78344 907 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHANK2-201ENST00000338508 MTUS2Q5JR59 1369 aa15.23■□□□□ 0.03
SHANK2-201ENST00000338508 GOLGA6L4A6NEF3 574 aa15.23■□□□□ 0.03
SHANK2-201ENST00000338508 ARID3AQ99856 593 aa15.22■□□□□ 0.03
SHANK2-201ENST00000338508 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.22■□□□□ 0.03
SHANK2-201ENST00000338508 ZNF330Q9Y3S2 320 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-201ENST00000338508 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.02
SHANK2-201ENST00000338508 CC2D1BQ5T0F9 858 aaKnown RBP15.2■□□□□ 0.02
SHANK2-201ENST00000338508 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
SHANK2-201ENST00000338508 GNL2Q13823 731 aaKnown RBP15.19■□□□□ 0.02
SHANK2-201ENST00000338508 MLECQ14165 292 aa15.18■□□□□ 0.02
SHANK2-201ENST00000338508 APBB1O00213 710 aa15.18■□□□□ 0.02
SHANK2-201ENST00000338508 NOC3LQ8WTT2 800 aaKnown RBP15.17■□□□□ 0.02
SHANK2-201ENST00000338508 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
SHANK2-201ENST00000338508 NRDCO43847 1150 aa15.15■□□□□ 0.02
SHANK2-201ENST00000338508 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
SHANK2-201ENST00000338508 SAFB2Q14151 953 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHANK2-201ENST00000338508 NUDCQ9Y266 331 aa15.13■□□□□ 0.01
SHANK2-201ENST00000338508 CARD11Q9BXL7 1154 aa15.12■□□□□ 0.01
SHANK2-201ENST00000338508 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
SHANK2-201ENST00000338508 KIAA2012Q0VF49 1180 aa15.11■□□□□ 0.01
SHANK2-201ENST00000338508 CCDC9Q9Y3X0 531 aaKnown RBP15.09■□□□□ 0.01
SHANK2-201ENST00000338508 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
SHANK2-201ENST00000338508 CREBRFQ8IUR6 639 aa15.08■□□□□ 0
SHANK2-201ENST00000338508 MSNP26038 577 aaKnown RBP15.07■□□□□ 0
SHANK2-201ENST00000338508 PLEKHD1A6NEE1 506 aa15.06■□□□□ 0
SHANK2-201ENST00000338508 WWC1Q8IX03 1113 aa15.06■□□□□ 0
SHANK2-201ENST00000338508 HSCBQ8IWL3 235 aa15.06■□□□□ 0
SHANK2-201ENST00000338508 CDCA8Q53HL2 280 aa15.05■□□□□ -0
SHANK2-201ENST00000338508 A0A0U1RQG5 324 aaPredicted RBP15.04■□□□□ -0
SHANK2-201ENST00000338508 SRPK2P78362 688 aaKnown RBP15.04■□□□□ -0
SHANK2-201ENST00000338508 CHMP3Q9Y3E7 222 aa15.03■□□□□ -0
SHANK2-201ENST00000338508 B4GALNT3Q6L9W6 998 aa15.02■□□□□ -0
SHANK2-201ENST00000338508 TMX4Q9H1E5 349 aaPredicted RBP15.02■□□□□ -0
SHANK2-201ENST00000338508 G3V3G9 751 aa15.02■□□□□ -0
SHANK2-201ENST00000338508 MCCP23508 829 aa15.02■□□□□ -0
SHANK2-201ENST00000338508 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
SHANK2-201ENST00000338508 HSP90B1P14625 803 aaKnown RBP15.02□□□□□ -0.01
SHANK2-201ENST00000338508 STK26Q9P289 416 aa15.02□□□□□ -0.01
SHANK2-201ENST00000338508 CSB-PGBD3P0DP91 1061 aa15.01□□□□□ -0.01
SHANK2-201ENST00000338508 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
SHANK2-201ENST00000338508 VPS53Q5VIR6 699 aa15□□□□□ -0.01
SHANK2-201ENST00000338508 GZF1Q9H116 711 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms