RNA–Protein interactions for RNA: ENST00000336314.8

LARP1-201, Transcript of La ribonucleoprotein domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LARP1, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1-201ENST00000336314 TONSLQ96HA7 1378 aa16.15■□□□□ 0.18
LARP1-201ENST00000336314 RGL3Q3MIN7 710 aa16.15■□□□□ 0.18
LARP1-201ENST00000336314 HSP90AA1P07900 732 aaKnown RBP16.13■□□□□ 0.17
LARP1-201ENST00000336314 SOX12O15370 315 aa16.13■□□□□ 0.17
LARP1-201ENST00000336314 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
LARP1-201ENST00000336314 HRCP23327 699 aa16.11■□□□□ 0.17
LARP1-201ENST00000336314 GOLGA2Q08379 1002 aa16.1■□□□□ 0.17
LARP1-201ENST00000336314 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.17
LARP1-201ENST00000336314 CSB-PGBD3P0DP91 1061 aa16.08■□□□□ 0.16
LARP1-201ENST00000336314 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
LARP1-201ENST00000336314 PAK3O75914 559 aaPredicted RBP16.07■□□□□ 0.16
LARP1-201ENST00000336314 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
LARP1-201ENST00000336314 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
LARP1-201ENST00000336314 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
LARP1-201ENST00000336314 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
LARP1-201ENST00000336314 GGT6Q6P531 493 aa16.03■□□□□ 0.16
LARP1-201ENST00000336314 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
LARP1-201ENST00000336314 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
LARP1-201ENST00000336314 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.16
LARP1-201ENST00000336314 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.15
LARP1-201ENST00000336314 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.01■□□□□ 0.15
LARP1-201ENST00000336314 MSH5O43196 834 aa16■□□□□ 0.15
LARP1-201ENST00000336314 TAOK2Q9UL54 1235 aa16■□□□□ 0.15
LARP1-201ENST00000336314 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
LARP1-201ENST00000336314 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
LARP1-201ENST00000336314 KANK1Q14678 1352 aa15.98■□□□□ 0.15
LARP1-201ENST00000336314 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.152e-8■■■■□ 19.7
LARP1-201ENST00000336314 G3V3G9 751 aa15.96■□□□□ 0.14
LARP1-201ENST00000336314 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.14
LARP1-201ENST00000336314 FAM9BQ8IZU0 186 aa15.95■□□□□ 0.14
LARP1-201ENST00000336314 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
LARP1-201ENST00000336314 CLSTN1O94985 981 aa15.94■□□□□ 0.14
LARP1-201ENST00000336314 SAFB2Q14151 953 aaKnown RBP eCLIP15.94■□□□□ 0.14
LARP1-201ENST00000336314 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
LARP1-201ENST00000336314 UPF2Q9HAU5 1272 aaKnown RBP15.92■□□□□ 0.14
LARP1-201ENST00000336314 RSF1Q96T23 1441 aaPredicted RBP15.91■□□□□ 0.14
LARP1-201ENST00000336314 STK26Q9P289 416 aa15.9■□□□□ 0.14
LARP1-201ENST00000336314 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.89■□□□□ 0.13
LARP1-201ENST00000336314 TNNT2P45379 298 aaPredicted RBP15.88■□□□□ 0.13
LARP1-201ENST00000336314 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
LARP1-201ENST00000336314 OS9Q13438 667 aaPredicted RBP15.85■□□□□ 0.13
LARP1-201ENST00000336314 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
LARP1-201ENST00000336314 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
LARP1-201ENST00000336314 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
LARP1-201ENST00000336314 CDCA8Q53HL2 280 aa15.81■□□□□ 0.12
LARP1-201ENST00000336314 EVA1CP58658 441 aa15.8■□□□□ 0.12
LARP1-201ENST00000336314 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
LARP1-201ENST00000336314 FOXD1Q16676 465 aa15.8■□□□□ 0.12
LARP1-201ENST00000336314 KNSTRNQ9Y448 316 aa15.79■□□□□ 0.12
LARP1-201ENST00000336314 U2SURPO15042 1029 aaKnown RBP15.78■□□□□ 0.12
LARP1-201ENST00000336314 CLIP1P30622 1438 aa15.78■□□□□ 0.12
LARP1-201ENST00000336314 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
LARP1-201ENST00000336314 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
LARP1-201ENST00000336314 NEUROD2Q15784 382 aa15.78■□□□□ 0.12
LARP1-201ENST00000336314 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
LARP1-201ENST00000336314 NACADO15069 1562 aa15.76■□□□□ 0.11
LARP1-201ENST00000336314 CCDC180Q9P1Z9 1646 aa15.76■□□□□ 0.11
LARP1-201ENST00000336314 CCNB3Q8WWL7 1395 aa15.76■□□□□ 0.11
LARP1-201ENST00000336314 CARMIL2Q6F5E8 1435 aa15.75■□□□□ 0.11
LARP1-201ENST00000336314 SF3B2Q13435 895 aaKnown RBP15.75■□□□□ 0.11
LARP1-201ENST00000336314 KRI1Q8N9T8 703 aaKnown RBP15.75■□□□□ 0.11
LARP1-201ENST00000336314 NAP1L2Q9ULW6 460 aaPredicted RBP15.74■□□□□ 0.11
LARP1-201ENST00000336314 GTF2E1P29083 439 aaPredicted RBP15.72■□□□□ 0.11
LARP1-201ENST00000336314 HNRNPUQ00839 825 aaKnown RBP eCLIP15.72■□□□□ 0.11
LARP1-201ENST00000336314 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
LARP1-201ENST00000336314 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
LARP1-201ENST00000336314 DDX10Q13206 875 aaKnown RBP15.71■□□□□ 0.1
LARP1-201ENST00000336314 CARD11Q9BXL7 1154 aa15.7■□□□□ 0.1
LARP1-201ENST00000336314 NUTM2FA1L443 756 aa15.7■□□□□ 0.1
LARP1-201ENST00000336314 ANP32AP39687 249 aaKnown RBP15.69■□□□□ 0.1
LARP1-201ENST00000336314 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
LARP1-201ENST00000336314 NGDNQ8NEJ9 315 aaKnown RBP15.69■□□□□ 0.1
LARP1-201ENST00000336314 TPRNQ4KMQ1 711 aa15.69■□□□□ 0.1
LARP1-201ENST00000336314 PPP1R1BQ9UD71 204 aaPredicted RBP15.68■□□□□ 0.1
LARP1-201ENST00000336314 FAM69CQ0P6D2 419 aa15.67■□□□□ 0.1
LARP1-201ENST00000336314 FGD1P98174 961 aa15.67■□□□□ 0.1
LARP1-201ENST00000336314 FTSJ3Q8IY81 847 aaKnown RBP15.66■□□□□ 0.1
LARP1-201ENST00000336314 HIRIP3Q9BW71 556 aaPredicted RBP15.66■□□□□ 0.1
LARP1-201ENST00000336314 HDGFL2Q7Z4V5 671 aaPredicted RBP15.66■□□□□ 0.1
LARP1-201ENST00000336314 MRS2Q9HD23 443 aa15.65■□□□□ 0.1
LARP1-201ENST00000336314 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
LARP1-201ENST00000336314 ZRSR1Q15695 479 aaKnown RBP15.65■□□□□ 0.1
LARP1-201ENST00000336314 EFCAB2Q5VUJ9 269 aa15.64■□□□□ 0.09
LARP1-201ENST00000336314 PNNQ9H307 717 aaKnown RBP15.63■□□□□ 0.09
LARP1-201ENST00000336314 WASHC2CQ9Y4E1 1318 aa15.63■□□□□ 0.09
LARP1-201ENST00000336314 PIP4K2BP78356 416 aa15.62■□□□□ 0.09
LARP1-201ENST00000336314 CWC22Q9HCG8 908 aaKnown RBP15.62■□□□□ 0.09
LARP1-201ENST00000336314 SENP3-EIF4A1A0A087X0R7 540 aa15.61■□□□□ 0.09
LARP1-201ENST00000336314 LTV1Q96GA3 475 aaPredicted RBP15.61■□□□□ 0.09
LARP1-201ENST00000336314 KCNJ4P48050 445 aa15.61■□□□□ 0.09
LARP1-201ENST00000336314 CHMP3Q9Y3E7 222 aa15.61■□□□□ 0.09
LARP1-201ENST00000336314 TAF7LQ5H9L4 462 aa15.61■□□□□ 0.09
LARP1-201ENST00000336314 SYTL4Q96C24 671 aaPredicted RBP15.61■□□□□ 0.09
LARP1-201ENST00000336314 WRNQ14191 1432 aaPredicted RBP eCLIP15.61■□□□□ 0.099e-7■■■□□ 17.2
LARP1-201ENST00000336314 KIF3BO15066 747 aa15.6■□□□□ 0.09
LARP1-201ENST00000336314 PRM3Q9NNZ6 103 aa15.59■□□□□ 0.09
LARP1-201ENST00000336314 CUX2O14529 1486 aa15.58■□□□□ 0.08
LARP1-201ENST00000336314 FRAT2O75474 233 aaPredicted RBP15.58■□□□□ 0.08
LARP1-201ENST00000336314 CC2D1BQ5T0F9 858 aaKnown RBP15.57■□□□□ 0.08
LARP1-201ENST00000336314 NCLP19338 710 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms