RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 TSPYL1Q9H0U9 437 aa7.06□□□□□ -1.28
TNRC6B-202ENST00000335727 RTN4Q9NQC3 1192 aaKnown RBP7.05□□□□□ -1.28
TNRC6B-202ENST00000335727 FANCIQ9NVI1 1328 aa7.05□□□□□ -1.28
TNRC6B-202ENST00000335727 TNNT3P45378 269 aaPredicted RBP7.05□□□□□ -1.28
TNRC6B-202ENST00000335727 CCDC9Q9Y3X0 531 aaKnown RBP7.05□□□□□ -1.28
TNRC6B-202ENST00000335727 UPF2Q9HAU5 1272 aaKnown RBP7.05□□□□□ -1.28
TNRC6B-202ENST00000335727 BCCIPQ9P287 314 aaKnown RBP eCLIP7.04□□□□□ -1.28
TNRC6B-202ENST00000335727 DNTTIP2Q5QJE6 756 aaKnown RBP7.04□□□□□ -1.28
TNRC6B-202ENST00000335727 GOLGA6L22H0YM25 854 aa7.03□□□□□ -1.28
TNRC6B-202ENST00000335727 GOLGA6L6A8MZA4 724 aa7.02□□□□□ -1.29
TNRC6B-202ENST00000335727 HMGB1P1B2RPK0 211 aaPredicted RBP7.01□□□□□ -1.29
TNRC6B-202ENST00000335727 BECN1Q14457 450 aa7.01□□□□□ -1.29
TNRC6B-202ENST00000335727 ATP1B4Q9UN42 357 aaPredicted RBP7□□□□□ -1.29
TNRC6B-202ENST00000335727 SUPT16HQ9Y5B9 1047 aaKnown RBP7□□□□□ -1.29
TNRC6B-202ENST00000335727 FKBP8Q14318 412 aa7□□□□□ -1.29
TNRC6B-202ENST00000335727 CHAF1AQ13111 956 aaPredicted RBP6.99□□□□□ -1.29
TNRC6B-202ENST00000335727 HAP1P54257 671 aaPredicted RBP6.99□□□□□ -1.29
TNRC6B-202ENST00000335727 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.99□□□□□ -1.29
TNRC6B-202ENST00000335727 CLSTN1O94985 981 aa6.99□□□□□ -1.29
TNRC6B-202ENST00000335727 SLC4A1APQ9BWU0 796 aaKnown RBP6.98□□□□□ -1.29
TNRC6B-202ENST00000335727 RBM19Q9Y4C8 960 aaKnown RBP6.98□□□□□ -1.29
TNRC6B-202ENST00000335727 TPM2P07951 284 aa6.97□□□□□ -1.29
TNRC6B-202ENST00000335727 ANP32CO43423 234 aa6.97□□□□□ -1.29
TNRC6B-202ENST00000335727 CCDC66A2RUB6 948 aa6.97□□□□□ -1.29
TNRC6B-202ENST00000335727 PSMD1Q99460 953 aa6.97□□□□□ -1.29
TNRC6B-202ENST00000335727 GOLGA6L1Q8N7Z2 621 aa6.97□□□□□ -1.29
TNRC6B-202ENST00000335727 CLGNO14967 610 aa6.96□□□□□ -1.3
TNRC6B-202ENST00000335727 ANO8Q9HCE9 1232 aaPredicted RBP6.96□□□□□ -1.3
TNRC6B-202ENST00000335727 TPRNQ4KMQ1 711 aa6.95□□□□□ -1.3
TNRC6B-202ENST00000335727 MSNP26038 577 aaKnown RBP6.95□□□□□ -1.3
TNRC6B-202ENST00000335727 FAM43AQ8N2R8 423 aa6.94□□□□□ -1.3
TNRC6B-202ENST00000335727 TSHZ2Q9NRE2 1034 aa6.94□□□□□ -1.3
TNRC6B-202ENST00000335727 SSR1P43307 286 aaKnown RBP6.93□□□□□ -1.3
TNRC6B-202ENST00000335727 SETQ01105 290 aaPredicted RBP6.93□□□□□ -1.3
TNRC6B-202ENST00000335727 FGD1P98174 961 aa6.92□□□□□ -1.3
TNRC6B-202ENST00000335727 NOM1Q5C9Z4 860 aaKnown RBP6.91□□□□□ -1.3
TNRC6B-202ENST00000335727 CC2D1BQ5T0F9 858 aaKnown RBP6.91□□□□□ -1.3
TNRC6B-202ENST00000335727 ZMYND15Q9H091 742 aa6.9□□□□□ -1.3
TNRC6B-202ENST00000335727 TCERG1O14776 1098 aaKnown RBP6.9□□□□□ -1.31
TNRC6B-202ENST00000335727 TAOK2Q9UL54 1235 aa6.88□□□□□ -1.31
TNRC6B-202ENST00000335727 GSE1Q14687 1217 aa6.88□□□□□ -1.31
TNRC6B-202ENST00000335727 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 RBM28Q9NW13 759 aaKnown RBP6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 PPP4R2Q9NY27 417 aa6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 HNRNPUL2Q1KMD3 747 aaKnown RBP6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 CSPP1Q1MSJ5 1256 aa6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 PATL2C9JE40 543 aaKnown RBP6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 NEFHP12036 1026 aa6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 ZNF622Q969S3 477 aaKnown RBP eCLIP6.87□□□□□ -1.313e-6■■■□□ 18.6
TNRC6B-202ENST00000335727 PDCL3Q9H2J4 239 aa6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 SALL2Q9Y467 1007 aaPredicted RBP6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
TNRC6B-202ENST00000335727 CWC15Q9P013 229 aaKnown RBP6.86□□□□□ -1.31
TNRC6B-202ENST00000335727 PLCD4Q9BRC7 762 aa6.86□□□□□ -1.31
TNRC6B-202ENST00000335727 IRX3P78415 501 aaPredicted RBP6.86□□□□□ -1.31
TNRC6B-202ENST00000335727 TIMELESSQ9UNS1 1208 aa6.86□□□□□ -1.31
TNRC6B-202ENST00000335727 DNAJC2Q99543 621 aaKnown RBP6.85□□□□□ -1.31
TNRC6B-202ENST00000335727 CHIC1Q5VXU3 224 aa6.85□□□□□ -1.31
TNRC6B-202ENST00000335727 ZBTB7CA1YPR0 619 aa6.85□□□□□ -1.31
TNRC6B-202ENST00000335727 TRIM41Q8WV44 630 aa6.85□□□□□ -1.31
TNRC6B-202ENST00000335727 CALD1Q05682 793 aaKnown RBP6.85□□□□□ -1.31
TNRC6B-202ENST00000335727 PLEKHG5O94827 1062 aa6.84□□□□□ -1.31
TNRC6B-202ENST00000335727 BBXQ8WY36 941 aaPredicted RBP6.83□□□□□ -1.32
TNRC6B-202ENST00000335727 KLHL34Q8N239 644 aa6.83□□□□□ -1.32
TNRC6B-202ENST00000335727 ISY1Q9ULR0 285 aaKnown RBP6.83□□□□□ -1.32
TNRC6B-202ENST00000335727 LOC105371045A0A1W2PR82 267 aa6.82□□□□□ -1.32
TNRC6B-202ENST00000335727 GPS2Q13227 327 aa6.82□□□□□ -1.32
TNRC6B-202ENST00000335727 NAP1L2Q9ULW6 460 aaPredicted RBP6.82□□□□□ -1.32
TNRC6B-202ENST00000335727 MCCP23508 829 aa6.82□□□□□ -1.32
TNRC6B-202ENST00000335727 PES1O00541 588 aaKnown RBP6.81□□□□□ -1.32
TNRC6B-202ENST00000335727 EEA1Q15075 1411 aa6.81□□□□□ -1.32
TNRC6B-202ENST00000335727 TEX35Q5T0J7 233 aa6.81□□□□□ -1.32
TNRC6B-202ENST00000335727 MNS1Q8NEH6 495 aa6.81□□□□□ -1.32
TNRC6B-202ENST00000335727 CTR9Q6PD62 1173 aa6.81□□□□□ -1.32
TNRC6B-202ENST00000335727 KIAA2012Q0VF49 1180 aa6.8□□□□□ -1.32
TNRC6B-202ENST00000335727 NRDCO43847 1150 aa6.8□□□□□ -1.32
TNRC6B-202ENST00000335727 IPO4Q8TEX9 1081 aaKnown RBP6.8□□□□□ -1.32
TNRC6B-202ENST00000335727 FTSJ3Q8IY81 847 aaKnown RBP6.8□□□□□ -1.32
TNRC6B-202ENST00000335727 C11orf95C9JLR9 678 aaPredicted RBP6.8□□□□□ -1.32
TNRC6B-202ENST00000335727 RBM10P98175 930 aaKnown RBP6.8□□□□□ -1.32
TNRC6B-202ENST00000335727 ZNF771Q7L3S4 317 aaPredicted RBP6.8□□□□□ -1.32
TNRC6B-202ENST00000335727 LETM1O95202 739 aaPredicted RBP6.79□□□□□ -1.32
TNRC6B-202ENST00000335727 USP8P40818 1118 aa6.79□□□□□ -1.32
TNRC6B-202ENST00000335727 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
TNRC6B-202ENST00000335727 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.79□□□□□ -1.32
TNRC6B-202ENST00000335727 STK11IPQ8N1F8 1099 aa6.79□□□□□ -1.32
TNRC6B-202ENST00000335727 PAIP2Q9BPZ3 127 aaKnown RBP6.79□□□□□ -1.32
TNRC6B-202ENST00000335727 PLPPR3Q6T4P5 718 aa6.78□□□□□ -1.32
TNRC6B-202ENST00000335727 ESF1Q9H501 851 aaKnown RBP6.77□□□□□ -1.33
TNRC6B-202ENST00000335727 KIF20AO95235 890 aa6.77□□□□□ -1.33
TNRC6B-202ENST00000335727 KIF3AQ9Y496 699 aa6.77□□□□□ -1.33
TNRC6B-202ENST00000335727 PAXIP1Q6ZW49 1069 aaPredicted RBP6.76□□□□□ -1.33
TNRC6B-202ENST00000335727 HMGN5P82970 282 aaKnown RBP6.76□□□□□ -1.33
TNRC6B-202ENST00000335727 WWC1Q8IX03 1113 aa6.76□□□□□ -1.33
TNRC6B-202ENST00000335727 SKOR2Q2VWA4 1001 aaPredicted RBP6.76□□□□□ -1.33
TNRC6B-202ENST00000335727 FAM193AP78312 1265 aa6.76□□□□□ -1.33
TNRC6B-202ENST00000335727 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.76□□□□□ -1.33
TNRC6B-202ENST00000335727 CASC1Q6TDU7 716 aa6.76□□□□□ -1.33
TNRC6B-202ENST00000335727 SETSIPP0DME0 302 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms