RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 LMOD2Q6P5Q4 547 aa14.13□□□□□ -0.15
CLN8-201ENST00000331222 MYH16Q9H6N6 1097 aa14.11□□□□□ -0.15
CLN8-201ENST00000331222 ZCCHC6Q5VYS8 1495 aaKnown RBP14.11□□□□□ -0.15
CLN8-201ENST00000331222 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.11□□□□□ -0.15
CLN8-201ENST00000331222 KCNH8Q96L42 1107 aa14.11□□□□□ -0.15
CLN8-201ENST00000331222 PPP1R15AO75807 674 aaPredicted RBP14.1□□□□□ -0.15
CLN8-201ENST00000331222 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
CLN8-201ENST00000331222 NCLP19338 710 aaKnown RBP14.09□□□□□ -0.15
CLN8-201ENST00000331222 ACIN1Q9UKV3 1341 aaKnown RBP14.08□□□□□ -0.16
CLN8-201ENST00000331222 AMER1Q5JTC6 1135 aaPredicted RBP14.07□□□□□ -0.16
CLN8-201ENST00000331222 RGL3Q3MIN7 710 aa14.04□□□□□ -0.16
CLN8-201ENST00000331222 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
CLN8-201ENST00000331222 CLSTN1O94985 981 aa14□□□□□ -0.17
CLN8-201ENST00000331222 NAP1L2Q9ULW6 460 aaPredicted RBP14□□□□□ -0.17
CLN8-201ENST00000331222 CCDC180Q9P1Z9 1646 aa13.99□□□□□ -0.17
CLN8-201ENST00000331222 TNNT2P45379 298 aaPredicted RBP13.99□□□□□ -0.17
CLN8-201ENST00000331222 NEUROD2Q15784 382 aa13.99□□□□□ -0.17
CLN8-201ENST00000331222 SOX12O15370 315 aa13.97□□□□□ -0.17
CLN8-201ENST00000331222 RRP7BPQ9NSQ0 103 aa13.97□□□□□ -0.17
CLN8-201ENST00000331222 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
CLN8-201ENST00000331222 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
CLN8-201ENST00000331222 GLIPR1L2Q4G1C9 344 aa13.96□□□□□ -0.17
CLN8-201ENST00000331222 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
CLN8-201ENST00000331222 DNTTIP2Q5QJE6 756 aaKnown RBP13.95□□□□□ -0.18
CLN8-201ENST00000331222 ZRSR1Q15695 479 aaKnown RBP13.94□□□□□ -0.18
CLN8-201ENST00000331222 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
CLN8-201ENST00000331222 TRIM44Q96DX7 344 aaPredicted RBP13.93□□□□□ -0.18
CLN8-201ENST00000331222 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
CLN8-201ENST00000331222 TSPY4P0CV99 314 aa13.93□□□□□ -0.18
CLN8-201ENST00000331222 TSPY10P0CW01 314 aa13.93□□□□□ -0.18
CLN8-201ENST00000331222 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
CLN8-201ENST00000331222 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
CLN8-201ENST00000331222 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
CLN8-201ENST00000331222 FTSJ3Q8IY81 847 aaKnown RBP13.88□□□□□ -0.19
CLN8-201ENST00000331222 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
CLN8-201ENST00000331222 OS9Q13438 667 aaPredicted RBP13.87□□□□□ -0.19
CLN8-201ENST00000331222 ANO8Q9HCE9 1232 aaPredicted RBP13.86□□□□□ -0.19
CLN8-201ENST00000331222 MLECQ14165 292 aa13.85□□□□□ -0.19
CLN8-201ENST00000331222 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.84□□□□□ -0.19
CLN8-201ENST00000331222 FGD1P98174 961 aa13.84□□□□□ -0.19
CLN8-201ENST00000331222 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
CLN8-201ENST00000331222 CASC1Q6TDU7 716 aa13.82□□□□□ -0.2
CLN8-201ENST00000331222 BECN1Q14457 450 aa13.82□□□□□ -0.2
CLN8-201ENST00000331222 SPRYD3Q8NCJ5 442 aa13.82□□□□□ -0.2
CLN8-201ENST00000331222 MTUS2Q5JR59 1369 aa13.81□□□□□ -0.2
CLN8-201ENST00000331222 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
CLN8-201ENST00000331222 MIER1Q8N108 512 aa13.8□□□□□ -0.2
CLN8-201ENST00000331222 KCNJ4P48050 445 aa13.8□□□□□ -0.2
CLN8-201ENST00000331222 RGS3P49796 1198 aa13.79□□□□□ -0.2
CLN8-201ENST00000331222 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLN8-201ENST00000331222 GOLGA6L22H0YM25 854 aa13.79□□□□□ -0.2
CLN8-201ENST00000331222 U2SURPO15042 1029 aaKnown RBP13.79□□□□□ -0.2
CLN8-201ENST00000331222 PDE4CQ08493 712 aa13.78□□□□□ -0.2
CLN8-201ENST00000331222 POGKQ9P215 609 aa13.78□□□□□ -0.2
CLN8-201ENST00000331222 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.2
CLN8-201ENST00000331222 PRM3Q9NNZ6 103 aa13.77□□□□□ -0.21
CLN8-201ENST00000331222 ERICH6BQ5W0A0 696 aa13.77□□□□□ -0.21
CLN8-201ENST00000331222 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
CLN8-201ENST00000331222 KNSTRNQ9Y448 316 aa13.75□□□□□ -0.21
CLN8-201ENST00000331222 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
CLN8-201ENST00000331222 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLN8-201ENST00000331222 SUPT16HQ9Y5B9 1047 aaKnown RBP13.73□□□□□ -0.21
CLN8-201ENST00000331222 APBB1O00213 710 aa13.73□□□□□ -0.21
CLN8-201ENST00000331222 HSP90AB1P08238 724 aaKnown RBP13.73□□□□□ -0.21
CLN8-201ENST00000331222 MAPK8IP3Q9UPT6 1336 aa13.73□□□□□ -0.21
CLN8-201ENST00000331222 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
CLN8-201ENST00000331222 DDRGK1Q96HY6 314 aa13.72□□□□□ -0.21
CLN8-201ENST00000331222 ARID3AQ99856 593 aa13.7□□□□□ -0.22
CLN8-201ENST00000331222 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
CLN8-201ENST00000331222 CCDC9Q9Y3X0 531 aaKnown RBP13.68□□□□□ -0.22
CLN8-201ENST00000331222 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
CLN8-201ENST00000331222 STK26Q9P289 416 aa13.66□□□□□ -0.22
CLN8-201ENST00000331222 DRC7Q8IY82 874 aa13.66□□□□□ -0.22
CLN8-201ENST00000331222 PLEKHD1A6NEE1 506 aa13.64□□□□□ -0.23
CLN8-201ENST00000331222 GNL2Q13823 731 aaKnown RBP13.63□□□□□ -0.23
CLN8-201ENST00000331222 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
CLN8-201ENST00000331222 SRPK2P78362 688 aaKnown RBP13.62□□□□□ -0.23
CLN8-201ENST00000331222 GOLGA6L4A6NEF3 574 aa13.61□□□□□ -0.23
CLN8-201ENST00000331222 GOLGA6L6A8MZA4 724 aa13.59□□□□□ -0.23
CLN8-201ENST00000331222 CHMP3Q9Y3E7 222 aa13.59□□□□□ -0.23
CLN8-201ENST00000331222 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
CLN8-201ENST00000331222 B4GALNT3Q6L9W6 998 aa13.58□□□□□ -0.24
CLN8-201ENST00000331222 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
CLN8-201ENST00000331222 CREBRFQ8IUR6 639 aa13.57□□□□□ -0.24
CLN8-201ENST00000331222 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
CLN8-201ENST00000331222 WWC1Q8IX03 1113 aa13.55□□□□□ -0.24
CLN8-201ENST00000331222 NOC3LQ8WTT2 800 aaKnown RBP13.55□□□□□ -0.24
CLN8-201ENST00000331222 SIN3AQ96ST3 1273 aa13.54□□□□□ -0.24
CLN8-201ENST00000331222 G3V3G9 751 aa13.54□□□□□ -0.24
CLN8-201ENST00000331222 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
CLN8-201ENST00000331222 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
CLN8-201ENST00000331222 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
CLN8-201ENST00000331222 ANP32EQ9BTT0 268 aa13.51□□□□□ -0.25
CLN8-201ENST00000331222 HSP90B1P14625 803 aaKnown RBP13.51□□□□□ -0.25
CLN8-201ENST00000331222 DCAF11Q8TEB1 546 aa13.51□□□□□ -0.25
CLN8-201ENST00000331222 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
CLN8-201ENST00000331222 CDCA8Q53HL2 280 aa13.51□□□□□ -0.25
CLN8-201ENST00000331222 NUTM2DQ5VT03 806 aaPredicted RBP13.5□□□□□ -0.25
CLN8-201ENST00000331222 EIF4G1Q04637 1599 aaKnown RBP13.5□□□□□ -0.25
CLN8-201ENST00000331222 VPS53Q5VIR6 699 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms