RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 CCDC61Q9Y6R9 512 aa11.08□□□□□ -0.64
SKP1-201ENST00000328392 SPOCK2Q92563 424 aa11.05□□□□□ -0.64
SKP1-201ENST00000328392 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
SKP1-201ENST00000328392 FAM212AQ96EL1 285 aa11.03□□□□□ -0.64
SKP1-201ENST00000328392 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
SKP1-201ENST00000328392 KIF12Q96FN5 646 aa10.99□□□□□ -0.65
SKP1-201ENST00000328392 MAP3K13O43283 966 aa10.96□□□□□ -0.65
SKP1-201ENST00000328392 MS4A3Q96HJ5 214 aa10.96□□□□□ -0.65
SKP1-201ENST00000328392 PYGBP11216 843 aa10.94□□□□□ -0.66
SKP1-201ENST00000328392 CLCN6P51797 869 aa10.94□□□□□ -0.66
SKP1-201ENST00000328392 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
SKP1-201ENST00000328392 GSE1Q14687 1217 aa10.93□□□□□ -0.66
SKP1-201ENST00000328392 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
SKP1-201ENST00000328392 TRPC6Q9Y210 931 aa10.89□□□□□ -0.67
SKP1-201ENST00000328392 PCDHB13Q9Y5F0 798 aa10.87□□□□□ -0.67
SKP1-201ENST00000328392 IFNL1Q8IU54 200 aa10.85□□□□□ -0.67
SKP1-201ENST00000328392 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
SKP1-201ENST00000328392 CHRM1P11229 460 aaPredicted RBP10.82□□□□□ -0.68
SKP1-201ENST00000328392 SGIP1Q9BQI5 828 aa10.82□□□□□ -0.68
SKP1-201ENST00000328392 PCDHB8Q9UN66 801 aa10.82□□□□□ -0.68
SKP1-201ENST00000328392 PELP1Q8IZL8 1130 aaKnown RBP10.78□□□□□ -0.68
SKP1-201ENST00000328392 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
SKP1-201ENST00000328392 ATMINO43313 823 aaPredicted RBP10.77□□□□□ -0.69
SKP1-201ENST00000328392 PKD2Q13563 968 aa10.76□□□□□ -0.69
SKP1-201ENST00000328392 ASTLQ6HA08 431 aaPredicted RBP10.76□□□□□ -0.69
SKP1-201ENST00000328392 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
SKP1-201ENST00000328392 TIE1P35590 1138 aa10.74□□□□□ -0.69
SKP1-201ENST00000328392 TTLL13PA6NNM8 815 aa10.73□□□□□ -0.69
SKP1-201ENST00000328392 ZNF467Q7Z7K2 595 aaPredicted RBP10.72□□□□□ -0.69
SKP1-201ENST00000328392 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
SKP1-201ENST00000328392 RNF25Q96BH1 459 aaPredicted RBP10.71□□□□□ -0.69
SKP1-201ENST00000328392 TMEM106CQ9BVX2 250 aa10.71□□□□□ -0.69
SKP1-201ENST00000328392 ECM2O94769 699 aaPredicted RBP10.69□□□□□ -0.7
SKP1-201ENST00000328392 PSEN1P49768 467 aa10.66□□□□□ -0.7
SKP1-201ENST00000328392 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
SKP1-201ENST00000328392 PDAP1Q13442 181 aaKnown RBP10.64□□□□□ -0.71
SKP1-201ENST00000328392 RIOK3O14730 519 aaKnown RBP10.63□□□□□ -0.71
SKP1-201ENST00000328392 RGL2O15211 777 aa10.63□□□□□ -0.71
SKP1-201ENST00000328392 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
SKP1-201ENST00000328392 SLC39A7Q92504 469 aa10.61□□□□□ -0.71
SKP1-201ENST00000328392 POTEFA5A3E0 1075 aa10.59□□□□□ -0.71
SKP1-201ENST00000328392 C7P10643 843 aa10.59□□□□□ -0.71
SKP1-201ENST00000328392 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
SKP1-201ENST00000328392 COLQQ9Y215 455 aaPredicted RBP10.57□□□□□ -0.72
SKP1-201ENST00000328392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
SKP1-201ENST00000328392 LHX8Q68G74 356 aa10.56□□□□□ -0.72
SKP1-201ENST00000328392 ZFP91Q96JP5 570 aaPredicted RBP10.56□□□□□ -0.72
SKP1-201ENST00000328392 VGFO15240 615 aaPredicted RBP10.55□□□□□ -0.72
SKP1-201ENST00000328392 CABP2Q9NPB3 220 aa10.54□□□□□ -0.72
SKP1-201ENST00000328392 IER5LQ5T953 404 aa10.52□□□□□ -0.73
SKP1-201ENST00000328392 SEC24BO95487 1268 aa10.5□□□□□ -0.73
SKP1-201ENST00000328392 POTEJP0CG39 1038 aa10.5□□□□□ -0.73
SKP1-201ENST00000328392 IRX5P78411 483 aaPredicted RBP10.5□□□□□ -0.73
SKP1-201ENST00000328392 GOLGA2Q08379 1002 aa10.49□□□□□ -0.73
SKP1-201ENST00000328392 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
SKP1-201ENST00000328392 RTN4Q9NQC3 1192 aaKnown RBP10.48□□□□□ -0.73
SKP1-201ENST00000328392 EFCAB3Q8N7B9 438 aa10.47□□□□□ -0.73
SKP1-201ENST00000328392 BCL11BQ9C0K0 894 aaPredicted RBP10.47□□□□□ -0.73
SKP1-201ENST00000328392 PLCG2P16885 1265 aa10.46□□□□□ -0.73
SKP1-201ENST00000328392 STK25O00506 426 aa10.45□□□□□ -0.74
SKP1-201ENST00000328392 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
SKP1-201ENST00000328392 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
SKP1-201ENST00000328392 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.44□□□□□ -0.743e-9■■□□□ 13.9
SKP1-201ENST00000328392 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
SKP1-201ENST00000328392 PDCD7Q8N8D1 485 aaKnown RBP10.43□□□□□ -0.74
SKP1-201ENST00000328392 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
SKP1-201ENST00000328392 OTUD5Q96G74 571 aa10.41□□□□□ -0.74
SKP1-201ENST00000328392 DPY19L2Q6NUT2 758 aa10.4□□□□□ -0.74
SKP1-201ENST00000328392 ILDR1Q86SU0 546 aaPredicted RBP10.4□□□□□ -0.74
SKP1-201ENST00000328392 CHGAP10645 457 aaKnown RBP10.37□□□□□ -0.75
SKP1-201ENST00000328392 PHF8Q9UPP1 1060 aa10.37□□□□□ -0.75
SKP1-201ENST00000328392 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
SKP1-201ENST00000328392 SOX12O15370 315 aa10.35□□□□□ -0.75
SKP1-201ENST00000328392 HS6ST3Q8IZP7 471 aa10.35□□□□□ -0.75
SKP1-201ENST00000328392 MS4A4AQ96JQ5 239 aa10.34□□□□□ -0.75
SKP1-201ENST00000328392 MFRPQ9BY79 579 aa10.33□□□□□ -0.76
SKP1-201ENST00000328392 FBXO22Q8NEZ5 403 aa10.31□□□□□ -0.76
SKP1-201ENST00000328392 MAMSTRQ6ZN01 415 aa10.3□□□□□ -0.76
SKP1-201ENST00000328392 SCUBE2Q9NQ36 999 aa10.29□□□□□ -0.76
SKP1-201ENST00000328392 NLRP6P59044 892 aa10.28□□□□□ -0.76
SKP1-201ENST00000328392 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
SKP1-201ENST00000328392 L3MBTL3Q96JM7 780 aaPredicted RBP10.27□□□□□ -0.77
SKP1-201ENST00000328392 BOLA1Q9Y3E2 137 aa10.25□□□□□ -0.77
SKP1-201ENST00000328392 DNAJC5Q9H3Z4 198 aa10.22□□□□□ -0.77
SKP1-201ENST00000328392 PPP1R37O75864 691 aa10.21□□□□□ -0.77
SKP1-201ENST00000328392 SLAIN1Q8ND83 568 aa10.21□□□□□ -0.77
SKP1-201ENST00000328392 TMEM121BQ9BXQ6 578 aaPredicted RBP10.21□□□□□ -0.77
SKP1-201ENST00000328392 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.21□□□□□ -0.77
SKP1-201ENST00000328392 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
SKP1-201ENST00000328392 MICALL2Q8IY33 904 aa10.2□□□□□ -0.78
SKP1-201ENST00000328392 G3V3G9 751 aa10.19□□□□□ -0.78
SKP1-201ENST00000328392 TMEM92Q6UXU6 159 aa10.14□□□□□ -0.79
SKP1-201ENST00000328392 GTPBP6O43824 516 aaPredicted RBP10.13□□□□□ -0.79
SKP1-201ENST00000328392 BBXQ8WY36 941 aaPredicted RBP10.08□□□□□ -0.8
SKP1-201ENST00000328392 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
SKP1-201ENST00000328392 LCE2DQ5TA82 110 aaPredicted RBP10.06□□□□□ -0.8
SKP1-201ENST00000328392 RYDENQ9NUL5 291 aaKnown RBP10.04□□□□□ -0.8
SKP1-201ENST00000328392 C2orf72A6NCS6 295 aa10.02□□□□□ -0.81
SKP1-201ENST00000328392 KIF3CO14782 793 aa10□□□□□ -0.81
SKP1-201ENST00000328392 ST18O60284 1047 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms